Biological Molecules Flashcards
How many different amino acids are used in proteins?
20
What do all amino acids contain?
Carbon, hydrogen, oxygen, nitrogen
What do some amino acids also contain?
Sulfur
Do all amino acids have the same structure?
Yes, but R can be one of 20 different chemical groups
What holds a chain of amino acids together?
Strong peptide bonds
How many amino acids long can proteins be?
Up to several hundred
What determines the structure of a protein?
The order of amino acids
What does the structure of a protein determine?
How the protein works
What is the primary structure?
The sequence of amino acids
What is the secondary structure ?
-Hydrogen bonds form between the amino acids all along the polypeptide chain (this is due to the polarity of the CO and the NH groups).
-These hydrogen bonds cause the polypeptide chains to twist and fold into shapes .
-The twisted 3d shape formed can either be an alpha helix cylindrical shape or a beta pleated sheet .
-Both these structures are maintained by hydrogen bonds
What are globular proteins?
Proteins that have a roughly spherical shape
What elements do carbohydrates contain?
Carbon, hydrogen and oxygen
What do the different types of carbohydrates include?
Sugars, starch and cellulose
What are sugars?
Small, water-soluble molecules that taste sweet
What groups are sugars divided to?
Monosaccharides and disaccharides
Why are the single units from which all carbohydrates are built?
Monosaccharides
What are glucose and fructose?
Monosaccharides
What 2 forms does glucose have?
Alpha and beta
How are disaccharides formed?
When 2 monosaccharides are joined together by a chemical reaction. A molecule of water is also formed
What sort of reaction is the reaction between 2 disaccharides?
A condensation reaction
What 2 polysaccharides are starch molecules made up of?
Amylose and amylopectin
Why is starch good at storing glucose?
Because it insoluble
What is cellulose?
A polysaccharide made up of glucose molecules
How do cellulose molecules lie?
Long and straight
Several cellulose molecules can lie side to side to form….
Microfibrils
Microfibrils are held together by…
Weak hydrogen bonds
Is cellulose found in animal cells?
No, only plant cells
What do the microfibrils do to the plant cell wall?
Strengthen it
What do lipids contain?
Carbon, hydrogen and oxygen
What 2 things can lipids be?
Fats and oils
What 2 things can lipids be?
Oils and fats
What are plant oils and animal fats mostly made up of?
Lipids called triglycerides
What does a tryglyceride consist of?
A molecule of glycerol with 3 fatty acids attached to it
What is a fatty acid molecule?
A long chain of carbon atoms with an acid group (COOH) at one end
What are attached to the carbon atoms in a fatty acid?
Hydrogen atoms
What is a fatty acid with many double bonds called?
Polyunsaturated
What is a special type of lipid?
A phospholipid
What are phospholipids?
Lipids that have 2 fatty acid chains and a phosphate group
What are cell membranes made from?
A double layer of phospholipids
What are enzymes?
Biological catalysts that increase the rate of the reaction
What do enzymes do to the activation energy?
Lower it
What type of enzymes are all proteins?
Globular proteins
What are enzymes involved in?
Breaking down molecules or building molecules
Why are digestive enzymes important in the digestive system ?
Because they help to break down food into smaller molecules
What do enzymess involved in DNA replication do?
They help to build molecules
What is the active site?
A region on the surface of an enzyme molecule where a substrate molecule can attach itself
The shape of the substrate molecule and the shape of the active site are …
Complementary
What happens as soon as the enzyme substrate complex is formed?
The products of the reaction are released and the enzyme is ready to accept another substrate molecule
Only one substrate will fit the enzyme correctly , so each enzyme only catalyses one specific reaction, true or false?
True
What happens when the temperature of an enzyme is increased?
The enzyme reactions become faster because the molecules have more energy.
What happens to enzymes at really high temperatures?
-The enzymes atoms vibrate quicker and break the weak bonds that hold the tertiary structure together.
-The shape of the active site changes and the substrate can no longer fit in.
-The enzyme is said to be denatured
What can acids and alkalis do to enzymes?
Denature them. Hydrogen ions in acids and hydroxyl ions in alkalis disrupt the weak bonds and change the shape of the active site
What are monosaccharides?
The monomers of carbohydrates
What are examples of monosaccharides?
Glucose, galactose, fructose, ribose, deoxyribose, glyceraldehyde
What type of bond form when monosaccharides like glucose bond?
Glycosidic bonds
What make up maltose?
Alpha glucose + alpha glucose
What forms sucrose?
Alpha glucose + fructose
What is the molecular forma of sucrose?
C12 H22 O11
What forms lactose?
Alpha glucose + galactose
What does sucrose and sucrase make?
Alpha glucose + fructose
what does amylose and amylopectin make ?
Starch
Is amylose a monosaccharide or a polysaccharide?
A polysaccharide
Is amylopectin a monosaccharide or a polysaccharide?
A polysaccharide
What is the common formula for monosaccharides?
Cn(H20)n
What are some examples of polysaccharides?
Glycogen, starch and cellulose
What polymers are formed by the condensation of alpha glucose?
Glycogen and starch
What polymer is formed from the condensation of beta glucose?
Cellulose
What is the difference between alpha glucose and beta glucose ?
The differenc is the differing positions of the -OH groups. Alpha is a same-sided 1-4 hydroxyl group , while beta refers to opposite sided 1-4 groups.
Draw alpha glucose
Answer in book
Draw beta glucose
Answer in book
What is the difference between ribose and deoxyribose?
Ribose has a hydroxyl group at position 2, whereas deoxyribose has a hydrogen atom at position 2. Due to this, deoxyribose sugar is more stable than ribose sugar
Draw ribose
Answer in book
Draw deoxyribose
Answer in book
What is an isomer?
Something with the same molecular formula but a different structure
What is respiration?
The process in which glucose is broken down to release energy in the form of ATP
What is the word equation for respiration?
Oxygen + glucose-≥ carbon dioxide + water
What is the symbol equation for respiration?
6O2 + C6H12O6 -≥ 6H2o + 6CO2
What is glucose stored as in plants?
Starch
What is glucose stored as in animals?
Glycogen
Why can’t beta glucose be respired?
Because of its shape
Is starch a polysaccharide?
Yes
What is amylose?
A polymer of glucose joined by a -1,4- glycosidic bonds. Amylose is unbranched and helical
What is amylopectin?
polymers of glucose joined by -1,4- glycosidic bonds but with branches of 1,6 glycosidic bonds. This causes the molecule to be branched rather than helical
Why is starch good for storage?
Because it is insoluble (due to its lack of polar areas)
In starch, why can more energy be stored in a small space?
Because the helix is compact
Why is starch an excellent long term storage molecule?
Because there are only a few branches for the enzyme amylase to act on so the release of energy is relatively slow.
Which has more branches, amylopectin or glycogen?
Glycogen
What is glycogen made up of?
Alpha glucose molecules with much shorter 1,4 chains and many more branches of alpha 1,6 glycosidic bonds than amylopectin
Why does glycogen have more branches than amylopectin?
Because animals have a higher energy requirement and so more branches allows for more free ends, where glucose molecules can either be added or removed, allowing for condensation reactions to occur more rapidly
Why is cellulose strong?
-Because it’s alternate arrangement causes straight chains to form
-these chains are then cross linked by hydrogen bonds which form between the hydroxyl group
Why are microfibrils strong?
Because hundreds of them are arranged in overlapping sheets that run at different angles. The hydrogen crosslinks also make cellulose very resistant to hydrolysis
Where is chitin found?
In the exoskeleton of insects
Does chitin have complex crosslinks?
Yes
Does alternate molecules/inversion occur in chitin?
Yes
What are the side chains of peptidoglycan?
Amino acids
What is peptidoglycan similar in structure to?
Cellulose
Does cross linking occur in peptidoglycan?
Yes
Are there alternate molecules in peptidoglycan?
Yes
Does peptidoglycan contain nitrogen?
Yes