ATP and Enzymes Flashcards

1
Q

Metabolism

A

The totality of an organism’s chemical reactions

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2
Q

Free Energy ΔG

A

The portion of a system’s energy that can do work when pressure and temperature are uniform, as in a living cell

Free energy is also a measure of a system’s instability: the more free energy a system has, the less stable it is

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3
Q

Endergonic

A

Absorbs free energy from its surroundings. Because free energy is stored, ΔG is positive and Endergonic reactions are not spontaneous.

Ex: Energy for cellular work.

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4
Q

Exergonic

A

A spontaneous reaction with a net release of free energy. ΔG is negative.

Ex: Cellular Respiration/ATP Synthesis ATP hydrolysis

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5
Q

Activation Energy (Ea)

A

The minimum energy required for a specific reaction to occur.

Ea allows the cell to control when chemical reactions occur

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6
Q

Enzyme

A

Enzymes lower the Activation Energy barrier, speeding up the process of the reaction. They also do not get used up in the process.

Enzymes have structural specificity for their substrates

Ex: Without sucrase, sucrose would sit in water for years without being broken down by hydrolysis.

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7
Q

ATP Hydrolysis

A

Hydrolysis adds water to break off the gamma phosphate in ATP, releasing so much energy. The gamma phosphate turns into an inorganic phosphate.

Ex: The hydrolysis of ATP produces much more energy than the hydrolysis of other molecules due to the instability of the triphosphate group. Once ATP becomes ADP, energy is released. This powers many metabolic reactions in a cell.

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8
Q

Thermophiles

A

microorganisms with optimal growth temperatures between 60 and 108 degrees CELSIUS isolated from marine and terrestrial geothermally heated habitats

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9
Q

Non-competitive Inhibitor

A

These types of inhibitors bind to a different region of the enzyme than the active site which changes the shape of it and deters its function.

Ex: The poison cyanide binds to and
blocks the function of cytochrome oxidase – a
carrier molecule that forms part of the electron
transport chain.

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10
Q

Competitive Inhibitor

A

These reduce the productivity of enzymes by blocking the active site. This can be overcome by increasing the concentration of substrate.

Ex: Penicillin blocks the active site
of an enzyme necessary for the synthesis of
peptidoglycans which many bacteria use to make
their cell wall.

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11
Q

Bioenergetics

A

the study of how energy
flows through living organisms

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12
Q

What kind of work does a cell need to perform?

A
  1. Chemical Work: ATP phosphorylates key reactants
  2. Transport Work: ATP Phosphorylates transport proteins
  3. Mechanical Work: ATP binds noncovalently to motor proteins and then is hydrolyzed

Energy for work comes from chemical reactions

Chemical Work example includes a phosphorylated intermediate of glutamic acid by ATP driving an endergonic reaction.

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13
Q

Energy Coupling

A

ATP mediates most energy coupling in cells and provides an immediate source of energy to power cellular work

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14
Q

ATPase

A

Enzymes that catalyze the hydrolysis of ATP into ADP

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15
Q

How does a phosphorylated intermediate make an endergonic reaction energetically favorable?

A

Energy released by ATP hydrolysis can be directly used to drive chemical reactions

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16
Q

Does breaking bonds absorb or release energy?
Does forming bonds absorb or release energy?

A

Breaking bonds absorbs energy and forming bonds releases energy.

17
Q

How does the active site lower the Ea and speed up reactions (3)

A
  1. Acting as a template for substrate orientation
  2. Stressing the substrate and stabilizing the transition state
  3. Providing a faborable environment for the reaction
18
Q

Is Pepsin acidic or basic (a stomach enzyme)?

Environmental conditions affect enzyme function such as temp and pH

A

Acidic

19
Q

Is Trypsin acidic or basic (an intestinal enzyme)?

Environmental conditions affect enzyme function such as temp and pH

A

Basic

20
Q

How does penicillin work to kill bacteria?

A

Penicillin is a competitive inhibitor that blocks the active site of an enzyme necessary for bacteria to make their cell wall (peptidoglycans).

21
Q

How does cyanide work to deter function in the ETC?

A

Cyanide works as a NONCOMPETITIVE INHIBITOR, blocking cytochrom oxidase – a carrier molecule in the ETC.