amino acids info Flashcards

1
Q

what is the glue that holds amino acids together

A

alpha carbon

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2
Q

alpha carbon is bonded to four groups…

A

amino group (-NH2), carboxyl group (-cooh), a hydrogen atom, and a unique side chan (-r)

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3
Q

all amino acids are chiral except for

A

glycine

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4
Q

human body only uses what kind of amino acids (L or D)

A

L-amino acids

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5
Q

L-amino acids

A

point to the lect in a fischer projection

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6
Q

the amino group is a base that is

A

typically protonated in the environment of the cell (NH^+)

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7
Q

the carboxylic acid functional group is typically

A

deprotonated in the aqueous environment of the cell, giving it a negative charge (COO-)

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8
Q

ions whose charges cancel out, producing a molecule with net neutral charge

A

zwitterions

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9
Q

amino acids whose R-groups contain non-aromatic hydrocarbon chains

A

non-polar alipathic

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10
Q

amino acids whose R-groups contain aromatic rings, except for histidine

A

non-polar aromatic

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11
Q

amino acids that can be either charged or uncharged

A

polar amino acids

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12
Q

amino acids with acidic residues (aspartic and glutamic acid) have an additional BLANK charge (aside from the one at their C-terminus) at physiological ph

A

negative

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13
Q

amino acids with basic residues (lysine and arginine) have an additional BLANK charge (aside from the one at their N-terminus) at physiological ph

A

positive

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14
Q

what amino acid is neutral at physiological ph

A

histidine

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15
Q

if glycine or proline are added into a protein, they will often

A

destabilize (break down) local alpha-helical secondary structure

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16
Q

what amino acids are targets of phosphorylation

A

serine, threonine, and tyrosine

17
Q

addition of a negatively charged phosphate to a molecule, which often changes the structure or function of that molecule

A

phosphorylation

18
Q

what amino acids can mimic the presence of a phosphate group

A

aspartic acid and glutamic acid

19
Q

cysteine is sometimes able to produce covalent BLANK bonds with other cysteine residues, holding together the subunits of a polypeptide

A

disulfide

20
Q

basic and acidic residues can interact to form BLANK due to other attractive positive and negative charges

A

salt bridges

21
Q

a covalent BLANK bond can form between the sulfur-containing R groups of two cysteine molecules

A

disulfide bond

22
Q

disulfide bonds form between cysteine residues under BLANK conditions

A

oxidizing (high ph)

23
Q

disulfide bonds can be broken under BLANK conditions

A

reducing (low ph)

24
Q

a molecule composed of two or more amino acids

A

peptide

25
Q

the bond connecting together the two amino acids

A

peptide bond

26
Q

when an amino group of one amino acid nucleophilically attacks the carboxyl group carbon of another amino acid. linking the two molecules together and releasing a water molecule, what happens

A

a peptide bond forms

27
Q

when a peptide bond is formed, the amino and carboxyl group have been transformed into an

A

amide

28
Q

peptide bond formation(condensation) is endergonic or exergonic?

A

endergonic (needs energy)

29
Q

peptide bond can only be broken by BLANK

A

hydrolysis

30
Q

peptide bonds are cleaved with the addition of a water molecule

A

hydrolysis

31
Q

peptide bond breaking (hydrolysis) is endergonic or exergonic

A

exergonic (releases energy)