4.2 - Factors affecting enzyme activity Flashcards

1
Q

What must happen for an enzyme to catalyse a reaction?

A

The enzyme must come into contact with the substrate, and the enzyme’s active site must be the correct shape and complementary to the substrate.

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2
Q

How can the structure of an enzyme be affected?

A

The structure of an enzyme can be affected by factors such as temperature and pH, which can cause changes in the shape of the enzyme’s active site.

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3
Q

How do temperature and substrate concentration affect enzyme activity?

A

Enzymes are more likely to come into contact with the substrate and catalyze reactions when the temperature and substrate concentration are increased.

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4
Q

How can the effects of different factors on enzyme action be investigated?

A

The effects of factors on enzyme action can be investigated by measuring the rate of the reaction catalyzed by the enzyme.

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5
Q

What 5 factors affect the rate of enzyme-controlled action?

A
  1. Enzyme concentration
  2. Substrate concentration
  3. Concentration of inhibitors
  4. pH
  5. Temperature
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6
Q

How does increasing temperature affect enzyme activity?

A

Increasing temperature increases the kinetic energy of particles, causing them to move faster and collide more frequently, which leads to more successful collisions between the enzyme and substrate, increasing the rate of reaction.

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7
Q

What is the temperature coefficient (Q10)?

A

The temperature coefficient (Q10) is a measure of how much the rate of a reaction increases with a 10°C rise in temperature. For enzyme-controlled reactions, this is usually taken as 2, meaning the rate of reaction doubles with a 10°C increase in temperature.

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8
Q

Why are enzymes affected by temperature?

A

Enzymes are proteins, and their structure is affected by temperature. As temperature increases, the bonds holding the protein together vibrate more, and the vibrations can cause the bonds to strain and break.

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9
Q

What happens when the bonds in an enzyme break due to high temperature?

A

When the bonds break, the enzyme undergoes a change in its tertiary structure, which alters its shape. This is called denaturation.

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10
Q

What happens to the enzyme’s active site during denaturation?

A

The active site changes shape and is no longer complementary to the substrate, meaning the substrate can no longer fit into the active site, and the enzyme can no longer function as a catalyst.

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11
Q

What is the optimum temperature for an enzyme?

A

The optimum temperature is the temperature at which an enzyme has the highest rate of activity.

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12
Q

Do all enzymes have the same optimum temperature? Give 3 different examples.

A

No, the optimum temperature of enzymes can vary. For example, many human enzymes have an optimum temperature of around 40°C, while thermophilic bacteria have enzymes with an optimum temperature of 70°C, and psychrophilic organisms have enzymes that work best below 5°C.

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13
Q

What happens to enzyme activity when the temperature exceeds the optimum temperature?

A

When the temperature exceeds the optimum, the enzyme begins to denature, and the rate of reaction decreases rapidly. A slight change in the shape of the active site makes it no longer complementary to the substrate, causing a loss of enzyme function.

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14
Q

Why is the decrease in enzyme activity rapid above the optimum temperature?

A

The loss of enzyme activity is rapid because all enzyme molecules denature at about the same temperature, leading to an abrupt change in activity.

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15
Q

Why does the decrease in enzyme activity below the optimum temperature happen more slowly?

A

Below the optimum temperature, the enzymes do not denature; they just become less active, leading to a slower decrease in the rate of reaction.

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16
Q

Does the temperature coefficient (Q10) apply after enzyme denaturation?

A

No, once the enzymes denature above the optimum temperature, the temperature coefficient (Q10) no longer applies, as the enzymes are no longer functional.

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17
Q

How have most living organisms evolved to cope with temperature extremes?

A

Most organisms have evolved to survive within a certain temperature range, but some organisms are specifically adapted to cope with extreme temperatures.

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18
Q

What are examples of extremely cold environments where organisms live?

A

Examples of cold environments include deep oceans, high altitudes, and polar regions.

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19
Q

How are enzymes of organisms in cold environments adapted to cold temperatures?

A

Enzymes in cold environments tend to have more flexible structures, particularly at the active site, making them less stable. This flexibility makes them more sensitive to temperature changes and more likely to denature with smaller temperature changes.

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20
Q

What are thermophiles and where do they live?

A

Thermophiles are organisms adapted to live in very hot environments, such as hot springs and deep-sea hydrothermal vents.

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21
Q

How are the enzymes of thermophiles adapted to high temperatures?

A

The enzymes of thermophiles are more stable than other enzymes due to the increased number of bonds (such as hydrogen bonds and sulfur bridges) in their tertiary structure, making them resistant to changes in shape as temperature rises.

22
Q

How do the active sites of enzymes in thermophiles differ from those in cold-adapted organisms?

A

The active sites of enzymes in thermophiles are more resistant to change due to the stronger bonds in their tertiary structure, which helps them maintain their shape even at higher temperatures.

23
Q

How does pH affect enzyme activity?

A

pH affects enzymes because hydrogen bonds and ionic bonds between amino acid R groups hold the protein in its precise 3D shape. A change in pH alters the concentration of hydrogen ions, which can disrupt these bonds and change the enzyme’s shape, affecting its function.

24
Q

What is the optimum pH for an enzyme?

A

The optimum pH is the hydrogen ion concentration at which an enzyme’s active site is in the correct shape, allowing the enzyme to function at its highest rate of activity.

25
Q

What happens when the pH moves away from the optimum?

A

When the pH becomes more acidic or alkaline, the structure of the enzyme and its active site is altered. If the pH returns to the optimum, the enzyme may regain its shape and function, which is known as renaturation.

26
Q

What happens if the pH changes too significantly?

A

If the pH changes significantly beyond the optimum, the enzyme’s structure is irreversibly altered, and the active site is no longer complementary to the substrate. This leads to denaturation, and the enzyme can no longer catalyze the reaction.

27
Q

How do hydrogen ions affect enzyme structure?

A

Hydrogen ions interact with polar and charged R groups, changing the degree of interaction between them. At low pH (high hydrogen ion concentration), the R groups interact less with each other, breaking bonds and changing the enzyme’s shape. At high pH (low hydrogen ion concentration), the enzyme’s shape also changes.

28
Q

Why do enzymes only function within a narrow pH range?

A

Enzymes only function within a narrow pH range because changes in pH alter the shape of the enzyme by affecting the interactions between the R groups, making the enzyme less effective or non-functional outside of its optimum pH.

29
Q

How do pH conditions affect enzymes in the human digestive system?

A

Each enzyme in the human digestive system has an optimum pH at which it functions best. These pH conditions vary depending on where the enzyme is located (e.g., stomach enzymes work best in acidic conditions, while intestinal enzymes work better in alkaline conditions).

30
Q

What is the site of action of: Saliva?

A

Mouth / Throat

31
Q

What is the site of action of: Gastric Juice?

A

Stomach

32
Q

What is the site of action of: Pancreatic Juice?

A

Small Intestine / Duodenum

33
Q

What is the pH of: saliva?

A

Neutral (pH 7-8)

34
Q

What is the pH of: Gastric Juice?

A

Acidic (pH 1-2)

35
Q

What is the pH of: Pancreatic Juice?

A

Slightly alkaline (pH 8)

36
Q

What enzymes are found in: Saliva?

A

Amylase

37
Q

What enzymes are found in: Gastric Juice?

A

Pepsin

38
Q

What enzymes are found in: Pancreatic Juice?

A
  1. Trypsin
  2. Lipase
  3. Amylase
  4. Maltase
39
Q

What is the role of Amylase?

A

Starch –> Maltose

40
Q

What is the role of Pepsin?

A

Proteins –> Polypeptides

41
Q

What is the role of Trypsin?

A

Proteins –> Polypeptides

42
Q

What is the role of Lipase?

A

Triglycerides –> glycerol + fatty acids

43
Q

What is the role of Maltase?

A

Maltose –> glucose

44
Q

What happens to the rate of reaction when substrate concentration increases?

A

When substrate concentration increases, the number of substrate molecules in a given area also increases, leading to a higher collision rate with enzyme active sites. This results in the formation of more enzyme-substrate complexes and an increase in the rate of reaction.

45
Q

How does enzyme concentration affect the rate of reaction?

A

Increasing enzyme concentration increases the number of available active sites, leading to faster formation of enzyme-substrate complexes and an increased rate of reaction, up to a maximum rate (Vmax).

46
Q

What is the Vmax?

A

Vmax is the maximum rate of reaction, where all active sites are occupied by substrate particles. At this point, no more enzyme-substrate complexes can form until products are released from the active sites.

47
Q

What happens when the substrate concentration reaches a point where all active sites are occupied?

A

Once all active sites are occupied by substrate particles, increasing the substrate concentration further does not increase the rate of reaction, as the enzyme is working at its maximum capacity (Vmax).

48
Q

How can you increase the reaction rate when the enzyme is working at Vmax?

A

To increase the reaction rate at Vmax, you would need to either add more enzyme (increasing the number of active sites) or increase the temperature.

49
Q

What happens if the enzyme concentration is increased when the substrate concentration is already high?

A

Increasing enzyme concentration provides more active sites, allowing the reaction rate to rise towards a higher Vmax. However, once the substrate concentration becomes limiting again, increasing substrate concentration will allow the reaction rate to rise until the new Vmax is reached.

50
Q

What is the formula to calculate the temperature coefficient?

A

Temperature coefficient = (rate of reaction at (x+10)°C) ÷ (rate of reaction at x°C)