2.5 enzymes Flashcards

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1
Q

what are enzymes?

A
  • function as biological catalysts by lowering the activation energy needed for a reaction to begin,
  • able to increase the rate of a reaction without being consumed by the reaction
  • usually made of proteins, although some RNA molecules can function as enzymes.
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2
Q

why do enzymes possess high selectivity?

A
  • arises from the shape and properties of the active site on the enzyme
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3
Q

what are the 2 models / hypotheses put forward to explain how enzymes function?

A
  • lock and key hypothesis

- induced fit hypothesis

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4
Q

what is the lock and key hypothesis?

A
  • hypothesis is that the substrate will match the active site of the enzyme on two different levels
  • structurally: substrate is of a shape that will fit into the active site, like a particular key for a particular lock
  • chemically: existence of interactions at the molecular level (charged attraction, polar/non-polar interactions) that allows for an attraction between the active site and the substrate
  • replaced by the induced fit hypothesis
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5
Q

what is the induced fit hypothesis?

A
  • if lock and key hypothesis is true, only one exact type of substrate can bind to a specific enzyme
  • reality is that the active site did not start out being completely complimentary to the substrate chemically and structurally
  • as substrate approaches the enzyme, the substrate induces a conformational change in structure of the enzyme, and the active site changes to fit the substrate
  • different substrates can induce a fit in the same enzyme, but there remains a high level of specificity as only a few substrates can induce the enzyme to fit them
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6
Q

how do enzymes work?

A
  1. enzyme available with empty active site
  2. substrate binds to enzyme with induced fit
  3. substrate is converted to products
  4. products are released
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7
Q

how does enzyme catalysis occur?

A
  • molecules in water will move about in a random fashion, as determined by the temperature
  • hence random level of collision between a substrate molecule and the active site of an enzyme in the solution
  • substrate may be at any angle to the active site when the collision occurs
  • successful collisions are ones in which the substrate and active site happen to be correctly aligned to allow binding to take place (or more accurately to allow binding after a inducing the enzyme to fit)
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8
Q

what 3 factors affect the rate of activity of enzymes?

A
  • temperature
  • pH
  • substrate concentration
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9
Q

how does temperature affect rate of activity of enzymes?

A
  • affects the rate of movement of the substrate and enzyme molecules
  • at higher temp, more heat energy present and the molecules are moving at a higher velocity
  • increased rate of collision between the substrate and enzyme molecules
  • however when temp increases beyond the optimum, bonds within the enzymes will start to break and the enzymes begins to denature
  • results in structural changes in the enzyme so that the active site may no longer fit the substrate properly
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10
Q

how does pH affect rate of enzyme activity?

A
  • amino acids have different charges based on the pH
  • when pH changes, the resultant change in charge can
    break some of the internal bonds within the enzyme
  • results in a structural change of the enzyme, as the enzyme will be denatured at pH drastically different from the optimal pH
  • leads to a change in shape of the active site which affects the level of successful binding of the substrate to the enzyme
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11
Q

how does substrate concentration affect rate of enzyme activity?

A
  • increasing substrate concentration increases the amount of substrate present per unit volume in the solution
  • more substrate molecules are present to collide with enzymes, leading to an increased rate of reaction
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12
Q

what is denaturation and how does it occur?

A
  • almost all enzymes are made of proteins
  • proteins maintain a particular 3 dimensional structure based on internal bonds formed between amino acids
  • when such bonds are broken, the protein will assume a different shape, and this is known as denaturation
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13
Q

how and why are enzymes immobilised?

A
  • in industries, enzymes are usually immobilised by attaching them to glass surfaces or trapping them in gel beads
  • efficient as enzyme can remain fixed in position while the substrate is brought to them
    • either in liquid agitated in a tank, or in a constant flow over the enzyme
  • reduces chance that the enzymes are exposed to new substrate molecules, as enzymes are fixed in place and now randomly distributed in a large volume of solution
  • enzymes can easily be removed as they are fixed in place, and recycled for the next batch of reaction
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14
Q

what are some common uses of immobilised enzymes in industrial use?

A
  • detergents containing enzymes to break down protein and fat stains
  • enzymes used to digest starch and even cellulose that can be further fermented to produce biofuels like ethanol
  • enzymes help to process fibres to polish cloth to make it shine
  • enzymes used to break down and clarify beer in a brewery
  • enzymes used to convert glucose into fructose which is a sugar and used in beverages like bubble tea
  • enzymes used to process wood pulp in the production of paper
  • enzymes used in diagnostic tests in the medical industry
  • enzymes used to break down proteins in the cleaning of contact lenses
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15
Q

what are the advantages of lactose-free milk?

A
  • lactase is the enzyme that digests lactose to glucose and galactose
  • when lactose is not properly digested, the products of digestion are not absorbed and lactose enters into the large intestines
  • large intestines contain lots of bacteria that will feed on the lactose to produce a large amount of gas, and can lead to symptoms like abdominal pain and diarrhoea
  • lactase production decreases with age, and some people may develop lactose-intolerance later as they grow older
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16
Q

how is lactose-free milk produced?

A
  • 1 way to reduce lactose content of milk is to turn the milk into yoghurt, where microorganisms feed on lactose and produce lactic acid which curds the milk
  • possible to produce low lactose milk on an industrial scale:
  • lactase extracted from a source like yeast or bacteria, and immobilised within alginate beads
  • milk passed down repeatedly over a column containing such beads
  • such milk tends to be sweeter as glucose and galactose is sweeter than lactose
  • can also be more suitable to make ice-cream, as the product sugars are more soluble than lactose and will not easily crystallise when frozen