2.1.4 - enzymes💯 Flashcards

1
Q

enzymes

A

proteins that act as biological catalysts, without the need of harsh conditions

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2
Q

anabolic reactions

A

synthesis of larger molecules from smaller ones
chemical reactions required for growth

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3
Q

catabolic reactions

A

break down large chemicals and release energy

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4
Q

metabolism

A

all of the chemical reactions that take place within an organism

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5
Q

vmax

A

maximum initial velocity of an enzyme catalysed reaction

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6
Q

activation energy

A

the minimum amount of energy required to start a chemical reaction

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7
Q

enzymes and activation energy

A

enzymes lowe the activation energy

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8
Q

enzymes and collisions

A

enzymes increase the rate of successful collisions and overall rate of reaction

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9
Q

active site

A

part of enzyme where the chemical reaction happens

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10
Q

lock and key theory

A

enzymes active site (lock) us already in appropriate conformation for the substrate to bind. the substrate easily fits into the active site, and no alteration is needed

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11
Q

enzyme substrate complex

A

when the substrate collides with the active site

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12
Q

enzyme product complex

A

when the substrate reacts and the products are formed

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13
Q

induced fit hypothesis

A

theory that states that after partial binding of the substrate to an enzyme, alters the structure of the enzyme so that the active site becomes complementary.

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14
Q

intracellular enzymes

A

enzymes that function within cells

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15
Q

example of intracellular enzymes

A

catalase - catalyses the breakdown of hydrogen peroxide into water and oxygen

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16
Q

extracellular enzymes

A

enzymes that are synthesised and secreted to work outside the cell

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17
Q

example of extracellular enzymes

A

single celled organisms rely on these to make use of polymers for nutrition
bacteria and yeast release enzyjmes to break down large molecules lile proteins
digestion - amylase and trypsin.

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18
Q

digestion of starch

A
  1. starch polymers are partially broken down into maltose, where amylase is produced.
  2. maltose is broken down into glucose where maltase is present
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19
Q

digestion of proteins

A

trypsin - catalyses the digestion of proteins into smaller peptides, which can then be broken down further. found in the pancreas.

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20
Q

factors that affect enzyme activity

A

pH, temp, concentration of enzyme or substrate

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21
Q

effect of temperature on enzyme activity

A

increasing temp of a reaction environment increases kinetic energy of the particles, leading to more successful collisions, so more ESCs made, increasing rate of reaction

22
Q

temperature coefficient

A

measure of how much the rate of reaction increases with a 10C rise in temperature - normally taken as 2

23
Q

denatured

A

loss of an enzymes normal shape so that it no longer functions as the bonds break due to vibrations. happens in the wrong conditions

24
Q

optimum temperature for ennzymes

A

temp where the enzyme has the highest rate of activity
- human - 37C
- thermophillic bacteria 70C
- psychrophilic organisms 5C

25
pH and hydrogen ion concentration
a change in pH refers to a change in hydrogen ion concentration more H ions - low pH less H ions - high pH
26
renaturation
regaining the correct tertiary structure after dentauration of the protein
27
effect of H ions on R groups
more H ions present, the less R groups will be able to interact with eachother
28
effect of increasing substrate concentration
increasing the number of substrate particles means a higher collision rate with the active site of enzymes and the formation of more enzyme substrate compleces - so the rate increases
29
only way to increase rate of reaction at Vmax of substrate concentration
add more enzymes
30
effect of increasing enzyme concentration
increasing the number of available active sites in a particular area or volume, leading to more ESCs
31
inhibitor
molcules that prevent enzymes from carrying out their normal function of catalysis
32
two types of enzyme inhibition
competitive and non competitive
33
how competitive inhibitors work
- molecule that has a similar shape to the substrate of an enzyme can fit into the active site of the enzyme - blocks substrate from active site, preventing the enzyme from catalysing the reaction - enzyme cannot carry out iys function
34
reversible inhibitors
bind temporarily to the active site of the enzyme
35
competitive inhibitors effect rate on reaction
reduce the rate of reaction but does not chage the Vmax - if enough substration concentration then there will be more substrates than the inhibitors, reaching the Vmax
36
examples of competitive inhibitors
statins - stop cholesterol from being produced aspirin - prevents the synthesis of prostaglandins
37
non competitive inhibitor
- inhibitor binds to the allosteric site, not the active site - causes the tertiary strucure to change, meaning the substrate is no longer complementary - enzyme cannot carry out function
38
effect of a non competitive inhibitor
reduces the rate of reaction - adding more substrate will not overcome the effect.
39
examples of non competitive inhibitors
organophosphates and proton pump inhibitors
40
end product inhibition
the product of a reaction inhibits the enzyme required for the reaction
41
examples of end product inhibition
glucose -- (phosphofructokinase) --> ATP - when ATP levels are too high more ATP binds to the allosteric site on PFK, preventing the productuon of more ATP
42
cofactor
non protein enzyme helpers
43
how cofactors are obrained
via diet as minerals - iron calcium chloride and zinc ions
44
example of cofactor
amylase contains an inorganic cofactor (cl ion) which enables formation of the active site for the substrate starch
45
coenzyme
organic co factor
46
prosthetic group
cofactor that binds tightly to an enzyme and forms a permanent feature of that protei.
47
example of a prosthetic group
Zn2+ for carbonic anhydrase
48
precursor activation
inactive form of the enzyme due to the fact that they can cause damage to the body when active. undergo a change un shape to the active site to be activated
49
apoenzyme
before the cofactor is added
50
holoenzyme
apoenzyme + holoenzyme
51
example of precursor activation
inactive pepsinogen released into the stomach to digest proteins activated by food acid pH then transforms into enzyme pepsin