2.1.4 - enzymes💯 Flashcards

1
Q

enzymes

A

proteins that act as biological catalysts, without the need of harsh conditions

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2
Q

anabolic reactions

A

synthesis of larger molecules from smaller ones
chemical reactions required for growth

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3
Q

catabolic reactions

A

break down large chemicals and release energy

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4
Q

metabolism

A

all of the chemical reactions that take place within an organism

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5
Q

vmax

A

maximum initial velocity of an enzyme catalysed reaction

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6
Q

activation energy

A

the minimum amount of energy required to start a chemical reaction

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7
Q

enzymes and activation energy

A

enzymes lowe the activation energy

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8
Q

enzymes and collisions

A

enzymes increase the rate of successful collisions and overall rate of reaction

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9
Q

active site

A

part of enzyme where the chemical reaction happens

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10
Q

lock and key theory

A

enzymes active site (lock) us already in appropriate conformation for the substrate to bind. the substrate easily fits into the active site, and no alteration is needed

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11
Q

enzyme substrate complex

A

when the substrate collides with the active site

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12
Q

enzyme product complex

A

when the substrate reacts and the products are formed

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13
Q

induced fit hypothesis

A

theory that states that after partial binding of the substrate to an enzyme, alters the structure of the enzyme so that the active site becomes complementary.

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14
Q

intracellular enzymes

A

enzymes that function within cells

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15
Q

example of intracellular enzymes

A

catalase - catalyses the breakdown of hydrogen peroxide into water and oxygen

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16
Q

extracellular enzymes

A

enzymes that are synthesised and secreted to work outside the cell

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17
Q

example of extracellular enzymes

A

single celled organisms rely on these to make use of polymers for nutrition
bacteria and yeast release enzyjmes to break down large molecules lile proteins
digestion - amylase and trypsin.

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18
Q

digestion of starch

A
  1. starch polymers are partially broken down into maltose, where amylase is produced.
  2. maltose is broken down into glucose where maltase is present
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19
Q

digestion of proteins

A

trypsin - catalyses the digestion of proteins into smaller peptides, which can then be broken down further. found in the pancreas.

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20
Q

factors that affect enzyme activity

A

pH, temp, concentration of enzyme or substrate

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21
Q

effect of temperature on enzyme activity

A

increasing temp of a reaction environment increases kinetic energy of the particles, leading to more successful collisions, so more ESCs made, increasing rate of reaction

22
Q

temperature coefficient

A

measure of how much the rate of reaction increases with a 10C rise in temperature - normally taken as 2

23
Q

denatured

A

loss of an enzymes normal shape so that it no longer functions as the bonds break due to vibrations. happens in the wrong conditions

24
Q

optimum temperature for ennzymes

A

temp where the enzyme has the highest rate of activity
- human - 37C
- thermophillic bacteria 70C
- psychrophilic organisms 5C

25
Q

pH and hydrogen ion concentration

A

a change in pH refers to a change in hydrogen ion concentration
more H ions - low pH
less H ions - high pH

26
Q

renaturation

A

regaining the correct tertiary structure after dentauration of the protein

27
Q

effect of H ions on R groups

A

more H ions present, the less R groups will be able to interact with eachother

28
Q

effect of increasing substrate concentration

A

increasing the number of substrate particles means a higher collision rate with the active site of enzymes and the formation of more enzyme substrate compleces - so the rate increases

29
Q

only way to increase rate of reaction at Vmax of substrate concentration

A

add more enzymes

30
Q

effect of increasing enzyme concentration

A

increasing the number of available active sites in a particular area or volume, leading to more ESCs

31
Q

inhibitor

A

molcules that prevent enzymes from carrying out their normal function of catalysis

32
Q

two types of enzyme inhibition

A

competitive and non competitive

33
Q

how competitive inhibitors work

A
  • molecule that has a similar shape to the substrate of an enzyme can fit into the active site of the enzyme
  • blocks substrate from active site, preventing the enzyme from catalysing the reaction
  • enzyme cannot carry out iys function
34
Q

reversible inhibitors

A

bind temporarily to the active site of the enzyme

35
Q

competitive inhibitors effect rate on reaction

A

reduce the rate of reaction but does not chage the Vmax - if enough substration concentration then there will be more substrates than the inhibitors, reaching the Vmax

36
Q

examples of competitive inhibitors

A

statins - stop cholesterol from being produced
aspirin - prevents the synthesis of prostaglandins

37
Q

non competitive inhibitor

A
  • inhibitor binds to the allosteric site, not the active site
  • causes the tertiary strucure to change, meaning the substrate is no longer complementary
  • enzyme cannot carry out function
38
Q

effect of a non competitive inhibitor

A

reduces the rate of reaction - adding more substrate will not overcome the effect.

39
Q

examples of non competitive inhibitors

A

organophosphates and proton pump inhibitors

40
Q

end product inhibition

A

the product of a reaction inhibits the enzyme required for the reaction

41
Q

examples of end product inhibition

A

glucose – (phosphofructokinase) –> ATP
- when ATP levels are too high more ATP binds to the allosteric site on PFK, preventing the productuon of more ATP

42
Q

cofactor

A

non protein enzyme helpers

43
Q

how cofactors are obrained

A

via diet as minerals - iron calcium chloride and zinc ions

44
Q

example of cofactor

A

amylase contains an inorganic cofactor (cl ion) which enables formation of the active site for the substrate starch

45
Q

coenzyme

A

organic co factor

46
Q

prosthetic group

A

cofactor that binds tightly to an enzyme and forms a permanent feature of that protei.

47
Q

example of a prosthetic group

A

Zn2+ for carbonic anhydrase

48
Q

precursor activation

A

inactive form of the enzyme due to the fact that they can cause damage to the body when active. undergo a change un shape to the active site to be activated

49
Q

apoenzyme

A

before the cofactor is added

50
Q

holoenzyme

A

apoenzyme + holoenzyme

51
Q

example of precursor activation

A

inactive pepsinogen released into the stomach to digest proteins activated by food acid pH then transforms into enzyme pepsin