Weeks 4 & 5 Flashcards
Cytoskeleton -
network of filaments extending throughout the cytoplasm
Cytoskeleton is composed of 3 types of filaments:
- Microfilaments: actin filaments, the thinnest components
- Intermediate filaments: filaments with middle-range diameters, composed by different types of proteins
- Microtubules: tubulin filaments, the thickest of the three components of the cytoskeleton
Microtubules structure -
hollow tubes; walls consist of 13 columns of tubulin molecules
Microtubules diameter
25 nm w/ 15-nm lumen
Microtubules protein subunits:
tubulin
Microtubules main fns (4):
- maintenance of cell shape
- cell motility
- mitotic spindle formation => chromosome mvmnt in cell division
- organelle mvmnts
Microtubules can increase or decrease in size by
addition or removal of monomers
Microtubules consist of
α & β tubulin dimers => form 13 protofilaments
each dimer has 2 GTP bound:
(+) end: fast polymerisation (addition of monomers)
(-) end: slow polymerisation
The continuous polymerisation or depolymerisation of microtubule is controlled by:
GTP hydrolysis:
-GTP attached to β-tubulin hydrolyzed to GDP during tubulin polymerisation
-The GTP bound to α-tubulin does not hydrolyze during tubulin polymerisation (has structural role)
also by Cytosolic calcium concentration: [Ca+2] > 0.5 mM => depolymerisation
Drugs that affect microtubule stability/formation:
Αnti-mitotic drugs: inhibit the mitotic spindle formation, for ex:
Colchicine, anti-inflammatory: binds to tubulin monomers => inhibits microtubule polymerisation = stopes mitotic spindle formation (acts in profase)
Τaxol, anti-cancer: binds to tubulin monomers => stabilises microtubules by inhibiting their depolymerisation during mitotic (acts in anaphase)
Microtubule polymerisation begins at the
ΜΤOC (Microtubule organizing centers) of the cells
Microtubule organizing centers (MTOC) (4), how microtubules are oriented:
- Centrosome: in most non-dividing cells
- Βasal body: in flaggelated and ciliated cells
- Polar body: in some fungi (part of the nuclear envelope)
- Chromosomal kinetochores of the mitotic spindle: in dividing cells (during metaphase)
Microtubule orientation:
- Τhe (-) end is oriented towards the cell center (MTOC)
- The (+) end is oriented towards cell periphery
Centrosome structure
has 2 centrioles (centriole pair), each consists of 9 triplets of microtubules (9+0 arrangement), at right angles to one another
Pericentriolar material (cloud)
space around centrosome, contains γ-tubulin, which:
- facilitates the nucleation of the α/β tubulin dimers by binding to the (-) end of microtubules
- induces their nucleation (polymerisation) by forming rings into which the microtubule assemble and elongate
fn: microtubule nucleation (initiation of polymerisation)
Microtubules: role in motility
- used as “monorails” for the mvmnt of cellular cargo (vesicles, organelles and chromosomes)
- from the cell centre to the periphery and vice versa
- interact w/ motor proteins to produce motility
Motor proteins in cytosol (2) and fn
fn: transport cellular cargo toward opposite ends of microtubules
Dynein: involved in transport from periphery to the cell center (retrograde to microtubule; from + to – end)
Kinesin: involved in transport from the cell center to the periphery (anterograde to microtubule; from – to + end)
Cilia and flagella: what are they and microtutubles arrangement
– permanent locomotor appendages of some eukaryotic cells
– contain specialized arrangements of microtubules: 9 pairs around 2 single central ones = 9+2 arrangement
Flagella
• Typically a single flagellum per cell (in eukaryotes)
• Flagella motility pattern: snakelike motion
• Example: sperm cells
Cilia
• Typically a lot of cilia per cell
• Ciliary motility pattern: back-and-forth motion
• Example: trachea cells, protists, fallopian tubes
Αxoneme -
The central strand of a cilium or flagellum
axoneme is surrounded by the PM
Axonemal proteins:
- Dynein: motor protein responsible for motility (diff from cytosolic: bigger, more ATP): bending mvmnt of cilia & flagella
- Nexin: connects microtubule doublets (pairs) between them
Basal body:
protein structure found at the base of a eukaryotic cilium or flagellum. Consists of 9 triplets of microtubules (like centrioles => 9+0 arrangement).
Why movement of cilia & flagella diff?
due to the diff in length, essentially mvmnt is the same
Motor proteins & their fns (4):
- cytosolic kinesin: vesicle and organelle transport from the cell centre to the periphery (anterograde to microtubule; from – to + end) [Karry Kargo trucK]
- cytosolic dynein: vesicle and organelle transport from periphery to the cell centre (retrograde to microtubule; from + to – end) [Dive Down Dynein the centre of the cell]
- axonemal dynein: on axonemal microtubules; causes movement of cilia/flagella.
- spindle kinesin: mitotic spindle assembly and chromosome segregation during cell division
All the motor proteins have ATPase activity
=> ATP hydrolysis => produce energy used for motility
Subcellular structures composed of microtubules:
cilia: 9+2 (9 doublets + 2 central microtubules)
flagella: 9+2 (-II-)
centriole: 9+0 (9 triplets + 0 central microtubules)
basal bosy: 9+0 (-II-)
centrosome: 2 centrioles places @ right angles to each other
Microfilaments structure:
2 intertwined strands of actin
Microfilaments diameter
7 nm
Microfilaments’ protein subunit
Actin
Microfilaments’ main fns (5):
- maintenance of cell shape (ex: microvili core of intestinal epithelial cells)
- changes in cell shape (formation of pseudopodia: filaments in direction of cell mvmnt polymerize and depolymerize in opposite direction)
- muscle contraction (actin-myosin contractile system)
- cell motility (pseudopodia + cytoplasmic streaming in plant & large fungal cells)
- cell division
Microfilament polymerisation
- Energy provided by ATP hydrolysis
- Filamentous F-actin is assembled from globular G-actin subunits containing bound ATP
- growth at + end, dissociation of actin-ATP at - end
Intermediate Filaments’ Functions (2) and characteristics (2):
– Support cell shape: provide tissue w/ resistance to mech stress
– Fix organelles in place: participate in cell junction formation (ex: epithelial cell desmosomes by kadherin)
– More permanent than other filaments
– Composed of different protein family categories (e.g. keratins)
Intermediate filament types, where found (6):
- Keratin: in epithelial cells
- Desmin: in muscle cells
- Vimentin: in mesenchymal cells
- Neurofilaments: in neurons
- GFAP (glial fibrillary acidic proteins): in neuroglia (glia)
- Lamins: in nuclear envelope
Keratins:
• Found in epithelial and epidermal cells
• In epithelial cell desmosomes => cytokeratins
• Major component of hair and nails, in intestinal epithelium, squamous epidermal epithelium
Desmin
• In muscle cells
• Connects myofibrils and Ζ-disks of the sarcomeres to each other
Sarcomere: basic unit of contraction of striated muscle tissue= the area between the two Z-disks.
Z-disk: a thin, dark disk that transversely bisects a striated muscle fiber.
Vimentin (another IF) also participates in Z-disk structure organisation in muscle cells
Glia fibrils
- in neuroglia
• Neuroglia (glia): non-neuronal cells that maintain homeostasis, form myelin, and provide support and protection for neurons in the nervous system.
• Glia fibrils: found in neuroglia (e.g. astrocytes)
- GFAP= Glial Fibrillary Acidic Protein => polymerised to form glia fibrils
- Role in astrocytic projection formation => CNS morphology
Lamins
lamin filaments found in the inner site of the nuclear envelope: provide structural support => make up nuclear envelope
Clinical correlations: cytoskeletal disorders
Chediak-Higashi syndrome
Kartagener’s syndrome
Chediak-Higashi syndrome:
microtubule-based lysosomal mobility inhereted defect (lysosomal trafficking deffect)
=> reduced fusion of phagosomes and lysosomes during phagocytosis
=> recurrent infections (inability to destroy microorganisms by phagocytosis)
Kartagener’s syndrome:
- immotile cilia/flagella due to axonemal dynein arm inherited defect.
- Results in male and female infertility (immotile sperm), sinusitis (bacteria and particles not pushed out)
Extracellular structures:
- cell walls of plant cells
- the extracellular matrix (ECM)
- intracellular junctions
ECM of animal cells:
- covers animal cells
- consists of: glycoproteins and proteoglycans
Glycoproteins -
glycosylated proteins (proteins with attached carbohydrate residues) e.g. collagen, fibronectin, laminin
Proteoglycans -
proteinated carbohydrates
(carbohydrates with attached protein residues)
ECM functions
- support
- adhesion
- movement
- regulation of gene expression
ECM components
Major proteins and glycoproteins (5):
- Collagen: major ECM glycoprotein (12 types)
- Fibronectin: ECM glycoprotein that connects to plasma membrane proteins (integrins) and to other ECM components (e.g. collagen) => connects plasma membrane with extracellular molecules
- Laminin: basement membrane glycoprotein
- Entactin: basement membrane glycoprotein
- Εlastin: connective tissue protein
ECM components
Proteoglycans
composed of proteins + glucosaminoglycans (GAGs)
Integrins
- transmembrane proteins that bind to several ECM components
- CAMs - Cell adhesion molecules: Cell surface transmembrane proteins that bind to the different ECM components
- Heterodimers made of one α and one β subunit
Inregrins’ extra- & intracellular domain:
- Extracellular domain: binds to the ECM glycoproteins (e.g. fibronectin) via a specific tripeptide sequence (Arg-Gly-Asp= RGD sequence)
- Intracellular domain: binds to cytoskeletal filaments (microfilaments or intermediate filaments)
Integrins Function:
link ECM components to cytoskeletal components inside the cell
=> Activation of cell-signalling pathways
=> signal transduction
=> cell survival/proliferation
Collagen: what, produced by, structure
- Major ECM glycoprotein and most abundant protein in the human body.
- 12 different collagen types (I-IV most common)
- produced by fibroblasts, epithelial cells
- Structure: 3 helical chains (triple helix); Repetitive motif Gly-X-Υ (X,Υ= proline, hydroxyproline, or hydroxy-lysine)
Basement membrane (basal lamina):
specialized ECM type that separates epithelium/mesothelium/endothelium from underlying connective tissue
Impt collagen types:
Type I (most common)
- skin, tendon, organs, bone
- associated syndrome: Reduced production in osteogenesis imperfecta (OI) type I.
Type II
- cartilage
Type III
- skin, blood vessels, uterus, fetal tissue, etc
- associated syndrome: deficient in vascular type Ehlers-Danlos syndrome (osteoarthritis)
Type IV
- basement membrane
- associated syndrome: Defective in Alport syndrome - glomerulonephritis
osteogenesis imperfecta (OI) type I is associated w/
reduced production of collagen type I
vascular type Ehlers-Danlos syndrome (osteoarthritis) is associated w/
Collagen type III is deficient