Week 6 - Clinical Microbiology 1 Flashcards
Describe the bacterial structure?
- Cell membrane
- Peptidoglycan cell wall (thicker in gram positives)
- Outer membrane
- Periplasm
- Positive/negative
List the 4 antibiotic targets?
- Cell wall peptidoglycan
- Metabolism
- DNA
- Ribosome
What are the 2 different ways that an antibiotic can act?
- Bactericidal
2. Bacteriostatic
Describe Bactericidal antibiotic action?
- Achieve sterilisation of the infected site by directly killing bacteria
- Lysis of bacteria can lead to release of toxins & inflammatory material
Describe Bacteriostatic antibiotic action?
- Suppresses growth but does not directly sterilise infected site
- Requires additional factors to clear bacteria- immune mediated killing
Describe the antibiotic spectrum?
- Spectrum refers to the range of bacterial species effectively treated by the antibiotic
- Antibiotic spectrum can vary widely even within the same antibiotic class
Describe the antibiotic spectrum of Meropenem?
- Active against almost all gram positive & gram negative species.
- Resistance is rare except for MRSA
Describe the antibiotic spectrum of
Benzyl-penicillin?
- Highly active against streptococci
- Most other disease causing bacteria are resistant
Describe Broad Spectrum antibiotics?
Treat most causes of infection but also have a substantial effect on colonising bacteria
Describe Narrow Spectrum antibiotics?
- Useful only where the cause of the infection is well defined
- Have a much more limited effect on colonising bacteria
Give 5 examples of gram negative bacteria?
- Pseudomonas
- Haemophilus
- Neisseria
- Other coliforms
- E. coli
Give 3 examples of gram positive bacteria?
- Streptococcus
- Enterococcus
- Staphylococcus
Give 2 examples of anaerobes bacteria?
- Clostridium
2. Bacteroides
What are the 3 uses of antibiotics?
- Guided therapy
- Empirical therapy
- Prophylactic therapy
Describe Guided therapy antibiotic use?
Depends on identifying cause of infection & selecting agent based on sensitivity testing
Describe Empirical therapy antibiotic use?
- Best (educated) guess therapy based on
clinical/epidemiological acumen - Used when therapy cannot wait for culture
Describe Prophylactic therapy antibiotic use?
Preventing infection before it begins
What 2 harms does antibiotic disruption of bacterial flora lead to?
- Overgrowth with yeasts- thrush
2. Overgrowth of bowel- diarrhoea
What 2 things is antibiotic use negatively associated with?
- Development of C. difficile colitis
2. Future colonisation & infection with resistant organisms
How could you compromise in antibiotic guided therapy?
- Use antibiotic which has limited action to the bacteria causing infection
- If possible limit penetration to site of infection
- Achieve clinical cure with as little impact on colonisation and resistance as possible
What type of antibiotic is best for guided therapy?
Narrow spectrum
What type of antibiotic is best for empirical therapy?
Broad spectrum
What are the 4 classes of β-Lactam Antibiotics?
- Penicillins
- Cephalosporins
- Carbapenems
- Monobactams
What is the antibiotic combination in Augmentin/Co-amoxiclav?
Amoxicillin/clavulanic acid
What is the antibiotic combination in Tazocin?
Piperacillin/tazobactam
List the 6 common β-Lactam Antibiotics?
- Benzylpenicillin
- Flucloxacillin
- Amoxicillin
- Ceftriaxone
- Meropenem
- Aztreonam
Describe the Mechanism of action of β-Lactam Antibiotics?
- β-lactam motif analogue of branching structure of peptidoglycan
- Inhibits cross linking of cell wall peptidoglycan
- Causes lysis of bacteria
What type of antibiotic are β-Lactam Antibiotics?
Bacteriostatic
What are Beta-lactamases?
Enzymes that lyse & inactivate beta-lactam drugs
What 2 things commonly secrete Beta-lactamases?
Gram negatives & S.aureus
What can Beta-lactamases lead to?
Confer high level resistance to antibiotic: Total antibiotic failure is likely to result
How are most β-Lactam Antibiotics administered & why?
- Most β-lactams poorly absorbed from GI tract: IV
- Some can be effective orally: amoxicillin, flucloxacillin. Vomiting limits dose
How are β-Lactam Antibiotics secreted?
Usually unchanged in urine, some also via bile
What is the half life of β-Lactam Antibiotics?
Half life varies enormously: Benzylpenicillin ≈ 1 hour Ceftriaxone ≈ 8 hours
What are the 4 types of adverse effects seen with β-Lactam Antibiotics?
- GI toxicity
- Hypersensitivity
- Infection
- Miscellaneous rare reactions (seizures, haemolysis, leukopenia)
List the 3 GI toxicity effects of β-Lactam Antibiotics?
- Nausea & vomiting
- Diarrhoea
- Cholestasis
List the 3 hypersensitivity effects of β-Lactam Antibiotics?
- Type 1 Urticaria, anaphylaxis
- Type 4 Mild to severe dermatology
- Interstitial nephritis
List the 3 infection effects of β-Lactam Antibiotics?
- Candidiasis: Oral Vulvovaginal
- Clostridium difficile infection
- Selection of resistant bacteria
Describe the common Type I hypersensitivity allergic reaction to antibiotics?
- Most patients develop an urticarial rash
- Anaphylaxis is the most feared complication
- Cross reaction between classes is variable
What are the 3 factors associated with reported hypersensitivity syndrome?
- Non allergic
- Gastrointestinal symptoms
- Therapeutic failure
Describe penicillin cross reactivity?
Patients allergic to a penicillin will usually be allergic to other penicillins
Describe how penicillin cross reactivity can be managed with other antibiotic classes?
- Penicillin allergy may be safely managed with other β-lactams
- Particularly important if patient presents with life- threatening infection (esp. meningitis)
What are the 3 common penicillins?
- Benzyl-penicillin
- Amoxicillin
- Flucloxacillin
What is the common Cephalosporins?
Ceftriaxone
What is the common Carbapenems?
Meropenem
What is the common Monobactams?
Aztreonam
What are the 2 common β-lactam/β-lactamase inhibitor combinations?
- Co-amoxiclav
2. Piperacillin/tazobactam = tazocin
Describe how Benzylpenicillin is administered?
- Administered IV
- There is an oral agent (Penicillin V) but not often
used
What is Benzylpenicillin used for?
1st choice antibiotic for serious streptococcal infection (i.e. erysipelas)
Benzylpenicillin is a ______ spectrum agent?
Narrow
What 2 bacterias is Benzylpenicillin very effective against?
- Streptococcus
2. Neisseria
What is Amoxicillin?
Semi-synthetic penicillin
What is Amoxicillin used for?
- Increased activity against gram negative organisms (resistance)
- More orally bioavailable than natural penicillins
- Treatment of a wide range of infections
What are the 3 bacterias that Amoxicillin is very effective against?
- Streptococcus
- Enterococcus
- Neisseria
What is Flucloxacillin?
Synthetic penicillin developed to be resistant to beta-lactamase produced by staphylococci
What are the 2 bacterias that Flucloxacillin is very effective against?
- Staphylococcus aureus (not MRSA)
2. Streptococci
What is Flucloxacillin NOT effective against?
No activity at all against gram negative organisms
What is the route for Flucloxacillin?
Orally but nausea limits dose
What are Beta-lactamase inhibitors administered with & why?
- Penicillin antibiotic
- Greatly broadens spectrum of penicillins against Gram negatives & S. aureus
What are 2 Beta-lactamase inhibitors?
- Clavulanic acid
2. Tazobactam
What are the 5 bacterias that Co-amoxiclav is effective against?
- Streptococcus
- Enterococcus
- Staphylococcus (not MRSA)
- Neisseria
- Haemophilus
What are the 5 bacterias that Benzylpenicillin is NOT effective against?
- Bacteroides
- Staphylococcus
- Other coliforms
- Haemophilus
- Pseudomonas
What are Cephalosporins effective against?
Good activity against Gram positives & Gram negatives
What is more susceptible to beta-lactamases: Cephalosporins or penicillins?
Penicillins
Describe the multiple generations of cephalosporins?
- Gram negative spectrum increases with each generation
- Some loss of Gram positive activity
- Recent introduction of MRSA active cephalosporins
What are the 5 bacterias that Ceftriaxone are effective against?
- Streptococcus
- Staphylococcus (not MRSA)
- E. coli
- Neisseria
- Haemophilus
What are the 2 bacterias that Ceftriaxone are NOT effective against?
- Enterococcus
2. Pseudomonas
What are Carbapenems?
Ultra-broad spectrum beta- lactam antibiotics developed during search for beta-lactamase inhibitors
Describe what Carbapenems are effective/resistant against?
- Excellent spectrum of activity against Gram positive & Gram negative
- No activity against MRSA
- Resistant to beta-lactamases
What are the 2 ultra broad spectrum antibiotics?
- Meropenem
2. Tazocin
What is the only member of the monobactam class of antibiotics?
Aztreonam
Describe Monobactams?
Beta-lactam antibiotic but no cross reactivity to penicillins so can be given to those with penicillin allergy (except anaphylaxis)
How are Monobactams administered?
Only given IV, no oral absorption
What are the 4 bacterias that Aztreonam is effective against?
- E. coli
- Neisseria
- Haemophilus
- Pseudomonas
What are the 5 bacterias that Aztreonam are NOT effective against?
- Staphylococcus (not MRSA)
- Enterococcus
- Streptococcus
- Clostridium
- Bacteroides
How does Vancomycin work?
- Inhibits cell wall formation in Gram positives only
- Not dependent on PBP binding so effective against resistant organisms
What is the route for administering Vancomycin?
- Not absorbed from GI tract so IV
- Oral route only for C. diff
How common is Vancomycin resistance?
Occurs but is uncommon (esp. Staph)
What is Vancomycins half life?
Long half-life so loading doses usually given
What is the main clinical issue with Vancomycin?
Underdosing
Describe the 4 factors of toxicity with Vancomycin?
- Nephrotoxicity-more likely with higher doses
- Red-man syndrome if injected too rapidly
- Ototoxicity (rare)
- Therapeutic drug monitoring undertaken (narrow therapeutic index)
What is Red-man syndrome?
- Anaphylactoid reaction
- Very rare now infusion rates slow
What is the most effective antibiotic to treat cellulitis?
Flucloxacillin
What antibiotic is effective against MRSA?
Vancomycin
Why are beta-lactams the most important class of antibiotics?
- Wide spectrum of activity
- Excellent efficacy
- Low toxicity
What are the 5 most common infectious causes of death in low-income countries?
- Lower respiratory infections
- HIV/AIDS
- Diarrhoeal diseases
- Malaria
- Tuberculosis
List the 6 antibiotic resistant infectious diseases?
- MRSA = Methicillin-resistant Staphylococcus aureus
- VRSA = Vancomycin-resistant Staphylococcus aureus
- ESBLs = Extended spectrum beta-lactamase
- CPEs = Carbapenemase Producing Enterobacteriaceae
- MDRTB = Multidrug-resistant TB
- HIV = Human immunodeficiency viruses
What are the 7 multifactorial reasons behind the increase in infectious diseases/resistance?
- New patterns of travel (air) & trade (food)
- Developments in agricultural practices/animal husbandry
- Sexual behaviour
- Medical interventions/developments in technology
- Increasing populations at extremes of age
- Over/unnecessary use of antibiotics
- The breakdown of economic, social & political systems
What infectious disease is a common cause of death in high income countries?
Lower respiratory tract infection
What is the 2nd most common reason for empirical antibiotic therapy?
UTI
Describe the occurrence and effects HAI have?
- Increased morbidity, mortality, use of investigations, use of antibiotics, length of stay
- Decreased throughput
- Costs NHS in Scotland approx. £200 million per year
What is the 2nd most common cause of death after cardiovascular disease?
Sepsis (70% community acquired)
What are the 8 resistance mechanism?
- Loss of porins
- Beta-lactamases in periplasmic space
- Overexpression of transmembrane efflux pump
- Antibiotic-modifying enzymes
- Target mutations
- Ribosomal mutation or modification
- Mutations in lipopolysaccharide structure
What is Carbapenem-resistant K. pneumonia susceptible to?
- Colistin
- Tigecycline
- Gentamicin
What are the 3 critical bacterias that need new antibiotics?
- Acinetobacter baumannii, carbapenem-resistant
- Pseudomonas aeruginosa, carbapenem-resistant
- Enterobacteriaceae, carbapenem-resistant, ESBL-producing
What are the 4 big challenges facing antibiotic development in the 21st century?
- New antibiotics are needed to combat resistance
- New antibiotics are reserved to guard against resistance
- It can take in excess of 10 years from discovery to launch
- Est. to cost $1billion to bring a new drug to market
What are the 4 targets for antibiotics?
- Cell wall biosynthesis
- Protein biosynthesis
- DNA & RNA replication
- Folate metabolism
What are the 3 types of antibiotics that inhibit the 50S Ribosomal Subunit?
- Macrolides
- Clindamycin
- Chloramphenicol
Give 3 examples of Macrolides?
- Erythromycin
- Clarithromycin
- Azithromycin
What are the 2 types of antibiotics that inhibit the 30S Ribosomal Subunit?
- Aminoglycosides (Gentamicin)
2. Tetracyclines (Doxycycline)
What are macrolides effective against?
- Good spectrum of activity against Gram positives & respiratory gram negatives
- Active against Legionella, Mycoplasma & Chlamydia
How are Macrolides administered?
Oral even in severe infection
What are the 5 bacterias that Clarithromycin is effective against?
- Streptococcus
- Staphylococcus
- Neisseria
- Haemophilus
- “Atypicals”
What are the 5 “Atypicals” that Clarithromycin is effective against?
- Legionella
- Mycoplasma
- Coxiella
- Chlamydia
- Chlamydophila
What are the 3 adverse effects associated with Macrolides?
- Diarrhoea & Vomiting
- QT prolongation
- Hearing loss with long term use
What are the 3 drugs that interact with Macrolides (esp. Clarithromycin)?
- Simvastatin- Avoid co-prescription, Temporarily stop simvastatin
- Atorvastatin
- Warfarin
Why should Macrolides only be used in relatively non-severe infections?
Resistance among “typical” pathogens is relatively common
What is Clindamycin similar to in terms of mechanism of action & absorption?
Macrolides (oral)
What are the 2 key differences of Clindamycin compared to Macrolides?
- No action against aerobic Gram negatives or
“atypicals” - Excellent activity against anaerobes
What is Clindamycin highly effective at?
Stopping exotoxin production
What are 2 gram positive toxin mediated diseases that Clindamycin is used to treat?
- Toxic shock syndrome
2. Necrotising fasciitis
What are the 4 bacterias that Clindamycin is effective against?
- Bacteroides
- Clostridium
- Streptococcus
- Staphylococcus
What is Clindamycin particularly effective against?
Anaerobes, which means its particularly effective at disrupting colonic flora
What is Clindamycin notorious for causing?
C. difficile
Describe C. Differgic antibiotics?
- Antibiotics dramatically alter the colonic flora
- C. difficile commonly colonises the human colon
- Forms spores which can be difficult to eradiacate from hospitals
- Has developed resistance to common antibiotic classes
What are the 4C’s which cause C. diff?
- Clindamycin
- Co-amoxiclav
- Cephalosporins
- Ciprofloxacin
Describe Chloramphenicol?
- Inhibits 50S ribosome
- Excellent broad spectrum of activity
- Toxic
What are the 3 side effects of Chloramphenicol’s toxicity?
- Bone marrow suppression
- Aplastic anaemia
- Optic neuritis
What are the 2 modern uses of Chloramphenicol?
- Topical therapy to eyes
2. Bacterial meningitis with beta-lactam allergy
What are the 2 mechanisms of action for Gentamicin (Aminoglycosides)?
- Reversibly binds to the 30S ribosome (bacteriostatic)
2. Poorly understood action on the cell membrane (bactericidal)
List the 3 side effects of Aminoglycosides toxicity?
- Nephrotoxicity
- Ototoxicity- hearing loss, loss of balance, oscillopsia
- Neuromuscular blockade (usually only significant in myaesthenia gravis)
Describe the once-daily dosing of Aminoglycosides?
- Give high initial dose
- Leave long dosing interval (24-48hrs) to minimise toxicity
- Measure trough level to ensure drug not accumulating
- Give for 3 days only
List the 4 bacteria that Gentamicin is effective against?
- Pseudomonas
- Staphylococcus
- E. coli
- Other coliforms
Describe Tetracyclines?
- Similar spectrum of activity to macrolides
- Also active against “atypical” organisms
- Relatively non-toxic
Why should Tetracyclines not be used for children & pregnant women?
- Bone abnormalities
2. Tooth discolouration
What are the 5 bacterias that Doxycycline is effective against?
- Streptococcus
- Staphylococcus
- Neisseria
- Haemophilus
- “Atypicals”
List the 5 “Atypicals” that Doxycycline is effective against?
- Rickettsia
- Mycoplasma
- Coxiella
- Chlamydia
- Chlamydophila
What are 2 types of antibiotics that work by inhibiting DNA Repair & Replication?
- Quinolones (Ciprofloxacin & Levofloxacin)
2. Rifampicin
What are Quinolones?
Broad spectrum, bactericidal antibiotics
Describe Ciprofloxacin (Quinolones) & its uses?
- Good against Gram negatives, weaker against Gram positives
- Commonly used in UTI/abdominal infection
Describe Levofloxacin (Quinolones) & its uses?
- Sacrifices some Gram negative activity for stronger Gram positive action
- Respiratory tract
What is the route of administering Quinolones?
Excellent oral bioavailability: can use oral dosing even in severe infection
List the 3 side effects of Quinolones toxicity?
- Gastrointestinal toxicity
- QT prolongation
- Tendonitis
What are 2 other therapeutic problems with Quinolones?
- Resistance emerging on therapy/tendon damage
2. C. diff infection (esp. in North America)
What are the 6 bacterias that Quinolones are effective against?
- E. coli
- Other coliforms
- Neisseria
- Haemophilus
- Pseudomonas
- Atypicals
List the 5 “Atypicals” that Ciprofloxacin & Levofloxacin are effective against?
- Legionella
- Mycoplasma
- Coxiella
- Chlamydia
- Chlamydophila
What are the 3 bacterias that Levofloxacin is effective against?
- Streptococcus
- Staphylococcus
- “Atypicals”
What are the 2 indications for Rifampicin in the UK?
- Tuberculosis (in combination therapy)
2. In addition to another antibiotic in serious Gram positive infection (esp. Staph. aureus)
What are the 2 Rifampicin interactions?
- Rifampicin is a potent CYP450 enzyme inducer
2. Most drugs that undergo hepatic metabolism affected
What are the 3 problems with Tuberculosis?
- Slow growing
- High bacterial burden
- Limited access of drugs to granuloma (no vascular
supply)
What are the 2 solutions to Tuberculosis?
- Prolonged courses of therapy (usually 6 months)
2. Combination therapy to prevent resistance & kill growing and resting organisms
What are the 4 standard short course drugs used too treat Tuberculosis?
- Isoniazid
- Rifampicin
- Ethambutol
- Pyrazinamide
Describe Isoniazid & what it causes?
- Bactericidal to fast growing mycobacteria
- Causes hepatotoxicity, peripheral neuropathy, B3 deficiency prevented with pyridoxine
Describe Rifampicin & what it causes?
- Bactericidal against slowly replicating organisms in necrotic foci
- Liver, bone marrow & renal toxicity relatively uncommon
Describe Ethambutol & what it causes?
- Bacteriostatic against slow growing mycobacteria
- Principle toxicity is optic neuritis, watch for loss of colour vision
Describe Pyrazinamide & what it causes?
- Bactericidal, even against slow growing mycobacteria intracellularly
- Principle toxicity is hepatitis, also causes arthralgia
What does inhibition of the folate metabolism pathway lead to?
Impaired nucleotide synthesis & therefore impaired DNA replication
Describe Trimethoprim?
- Orally administered
- Good range of action against Gram positive & Gram negative
What is Trimethoprim limited to use in?
Uncomplicated UTI
Describe the 3 factors of Trimethoprim’s toxicity?
- Elevation of serum creatinine
- Elevation of serum K+, problematic in patients with chronic renal impairment
- Rash & GI disturbance relatively uncommon
What is Co-trimoxazole?
Trimethoprim / Sulfamethoxazole combination antibiotic
What are the 2 side effects of Co-trimoxazole toxicity?
- Bone marrow suppression
2. Stevens Johnson Syndrome
What are the 2 advantages of Co-trimoxazole?
- Used in certain uncommon infections by specialists
2. Pneumocystis jirovecii pneumonia
What is the mechanism of action of Metronidazole?
- Enters by passive diffusion & produces free radicals
- Effective against most anaerobic bacteria (not actinomyces)
What is Metronidazole often added to?
Therapy in intra-abdominal infections, esp abscess
What are the 2 side effects of Metronidazole?
- Unpleasant reaction with alcohol
- Peripheral neuropathy with long term use
What is an Uncomplicated UTI (cystitis)?
- Lower urinary tract symptoms
- Absence of sepsis or evidence of upper tract involvement (pyelonephritis)
Describe the treatment of an Uncomplicated UTI (cystitis)?
- Treatment only needs to sterilise urine, no need for systemic activity
- Low risk infection so can often wait for culture results
Describe Trimethoprim’s effect in lower UTI treatment?
- 1st line agent
- Avoid in 1st trimester of pregancy
- Penetrates well into prostate so good choice for men
Describe Nitrofuratoin’s effect in lower UTI treatment?
- Excellent, broad spectrum of activity
- Concentrated in urine so no effect on other tissues
- Failure to concentrate in urine in renal failure
- Relatively non-toxic in short courses
What is the toxic side effect of Nitrofuratoin with long term use?
Pulmonary fibrosis
What is the principle bacterial cause of a UTI?
E. coli
What antibiotic would you use for a woman with an uncomplicated UTI & no past medical history or systemic symptoms?
Trimethoprim
What antibiotic would you use for a women with a complicated UTI?
Ciprofloxacin
What 2 possible antibiotic would you use for a women with a UTI & is severely unwell?
- Amoxicillin
2. Gentamicin
What are 3 antibiotics that are thought to be safe in pregnancy?
- Most beta-lactams
- Macrolides
- Anti-tuberculants
What are 5 antibiotics that are NOT thought to be safe in pregnancy?
- Tetracyclines- Bone/tooth abnormalities
- Trimethoprim- Neural tube defects (1st Tri)
- Nitrofurantoin- Haemolytic anaemic (3rd Tri)
- Aminoglycosides- Ototoxicity (2nd/3rd Tri)
- Quinolones- Bone/joint abnormalities
Describe Inherently resistant antibiotics?
Lack a pathway or target which a drug interacts with, or the drug is unable to gain access to the target
Describe antibiotics with Acquired resistance?
Drug which was previously sensitive has gained some genetic material encoding for resistance
What are 2 examples of inherent resistance antibiotics?
- Vancomycin against Gram negative bacteria
2. Metronidazole against aerobic bacteria
What are the 4 ways main that antibiotics can develop resistance?
- Enzymes inactivate/modify antimicrobials (beta-lactamases)
- Change drug target so that antibiotic no longer has any effect
- Decreasing cell permeability to the drug (decreased porins), so the conc required to be effective is not achieved
- Bacteria export the drug from inside the cell (multi-drug resistance efflux pump)
What are the 4 main ways that a bacterial cell can become resistant to antibiotics?
- Chromosomal mutation
- Acquisition of a mobile piece of DNA (plasmid, integron or transposon)
- DNA uptake can also occur through transformation (only certain types of bacteria)
- Pieces of DNA can be transferred between bacteria by viruses
What is vertical gene transfer?
Genetic information passed from parent cell to progeny via binary fission
What is horizontal gene transfer?
Genes transferred other than through traditional reproduction
What is horizontal & vertical gene transfer the primary reason for?
Antibiotic resistance
What happens once a mutation coding for antibiotic resistance has occurred in a cell?
Transfer this mutation to all their progeny (vertical transmission)
What is treatment of infections with 2 drugs acting in different ways based on?
Principle that if a mutation occurs in 1 drug target the other drug will still kill the organism, this is because we don’t yet know the sensitivity of the organism
Give an example for when an infection is treated with 2 drugs?
Pseudomonas infection with tazocin & gentamicin
Describe bacterial conjugation?
- Requires cell to cell contact between 2 bacteria (don’t need to be same species)
- Small pieces of DNA called plasmids are transferred
- Horizontal gene transfer
What 2 things can be transferred in bacterial conjugation?
- Antibiotic resistance
2. Ability to use new metabolites
What are plasmids?
Pieces of circular double stranded DNA
What 2 things can be carried on plasmids?
- Genetic information (resistance to antibiotics, allow themselves to replicate, heavy metals, UV light)
- Genes which encode pili, mediate adherence & toxins (genes of interest to host cell)
What are the 2 ways plasmids can exist?
- Free within the cell
2. Integrated into the host chromosome
What are plasmids important in?
Horizontal gene transfer
What are plasmids capable of doing?
Replicating themselves independently of the bacterial chromosome
Where are plasmids found in?
Gram positives & Gram negatives & several different types of plasmids can exist within a single cell
What are 4 factors which make plasmids a very effective way of spreading resistance?
- Multiply in high numbers
- High rate of cell to cell transfer
- Can be picked up by different species
- Carry genes for resistance to several drugs at once
What does the most common resistance information carried on plasmids relate to?
Enzymes which break antibiotics down or modifications to membrane drug transport systems
What is transduction?
Small pieces of DNA are transferred between bacteria (usually same species) by a virus
What are Bacteriophages?
Viruses which infect bacteria
How is transduction different to conjugation/transformation?
- Unlike conjugation it does not require the cells to touch
- Unlike transformation its unaffected by DNAses in the bacterium environment
What is released when bacteria die & what happens to it?
- Some naked DNA is released into the surrounding environment
- Some bacteria are capable of taking naked DNA up & inserting it into their chromosome
What happens if the naked DNA released by a dead bacteria inserts into a coding region for penicillin binding protein?
Change in the penicillin binding protein meaning that it can still cross link the peptidoglycan precursors to form the cell wall but has a reduced affinity for beta-lactam antibiotics such as penicillin which will then no longer kill the bacteria
What has been seen clinically for the process of naked DNA inserting into a coding region?
Some strains of Strep pneumoniae have become resistant to penicillin
What is transformation a mechanism of?
Horizontal gene transfer
What makes a successful resistance mutation?
The balance between the fitness cost & the selection pressure
What happens in an environment without a selective pressure?
Slower growing mutants will be outgrown by their wildtype colleagues & will slowly die away
What does the time taken for bacteria to grown mutations depend on?
Significance of the fitness cost associated with that mutation
What can sometimes develop in the mutated bacteria to compensate for the fitness cost?
Other mutations may develop which allow the mutated bacteria to compete with wild type colleagues
What is 1 area that we can really influence the development of antibiotic resistance?
Selection pressure (changing culture of antibiotics —> resistance mutations less likely to persist)
Describe the timeline of resistance in Staphylococcus aureus?
- Penicillin introduced
- Penicillin resistant strains detected
- Methicillin introduced
- Methicillin resistant strains detected (MRSA)
- Increasing use of vancomycin
- Vancomycin intermediate strains detected
- Vancomycin resistant strains detected
Describe MRSA?
Strains are resistant to all Beta-lactams except some very new cephalosporins
What is the gene that codes for MRSA resistance?
MecA gene
What is the purpose of the penicillin binding protein?
Mediate the cross linking in the peptidoglycan which makes up the bacterial cell wall
What does the MecA gene cause?
Decreased affinity, which allows the bacteria to continue to produce cell wall even in high concentrations of the drug
What is a major risk factor for MRSA?
Nursing home care