Week 3 Skildum- Folate, Cobalamin (B12), Cholesterol, Glycogen Metabolism Flashcards
How is dietary folate taken up from the diet?
Green leafy vegetables, liver, legumes, yeast, and fortified flour.
What is the vitamin precursor for folate?
Folate
What are the three parts of a complete folate molecule?
- Pteridine ring 2. PABA 3. Glutamate
What two molecules is folate reduced to?
Folate is reduced to dihydrofolate (FH2), and reduced again to tetrahydrofolate (FH4 or THF).
What enzyme reduces Folate to Dihydrofolate (FH2)?
Dihydrofolate Reductase a.k.a. DHFR
(with NADPH)
What enzyme reduces Dihydrofolate (FH2) to Tetrahydrofolate (FH4/THF)?
Dihydrofolate Reductase a.k.a. DHFR
(with NADPH)
What happens to Folate’s poly-glutamate “tail”?
It is digested in the gut down to mono-glutamate.
Why is Dihydrofolate reductase (DHFR) an important drug target?
It is involved in the anti-inflammatory response.
Blocking DHFR consequently blocks DNA synthesis.
What three drugs target Dihydrofolate reductase (DHFR)?
- Methotrexate (cancer & rheumatoid arthritis)
- Trimethoprim (antibacterial)
- Pyrimethamine (antimalarial)
What is the major form of Folate in the blood?
N5-tetrahydrofolate (5-Methyl THF)
Where is Folate reduced to the N5-methyl tetrahydrofolate form?
Intestinal epithelial cells
What is the most oxidized form of THF?
5-Formyl THF
(HC=O)
What is the most reduced form of THF?
5-Methyl THF
(CH3)
What AA is degraded to donate Formate for the modication of THF?
Tryptophan donates one carbon in the form of Formate to modify THF.
In the addition of one carbon from formate,
FH4 + formate → ???
N10-formyl FH4
(requires ATP,also produces water)
10-Formyl THF is reduced to what molecule in a reversible reaction?
5,10-Methenyl THF
(produces H2O)
5,10-Methenyl THF is reduced to what molecule in a reversible reaction?
5,10-Methylene THF
(requires NADPH)
5,10-Methylene THF is reduced to what molecule in an IRREVERSIBLE reaction?
5-Methyl THF
(requires NADH)
(also known as the “Methyl Trap” reaction)
FH4+ histidine → ???
5,10-Methenyl THF
(FH4+ histidine → 5-Formimino THF (FIGLU)
FIGLU + NH4+→ 5,10-Methenyl THF)
Note: In folate deficiency FIGLU accumulates.
What AA is the most most important and most abundant contributor to the one carbon pool for the reduction of folate?
Serine
FH4+ serine → ???
5,10-Methylene THF
What enzyme and cofactor is needed to catalyze the reaction of FH4 + serine → 5,10-Methylene THF?
Serine hydroxymehtyltransferase and PLP
What are the 5 sources of the one-carbon pool in the modification of THF?
Serine, glycine, choline, histidine, and formate.
What are the four products of the one carbon donations in the modification of THF?
- Thymidine nucleotide
- Purine bases
- Methionine
- S-adenosyl methionine
What reaction does Thymidylate Synthase (TS) catalyze?
Thymidylate synthase (TS) reduces a methylene carbon to methyl during its transfer from dUMP to dTMP.
(Cofactor for this reaction is oxidized, producing FH2)
After being oxidized to Dihydrofolate (FH2), the cofactor for Thymidine nucleotide synthesis reacts with Folic acid and DHFR (NADPH + H+) to produce what molecule?
Tetrahydrofolate (FH4), which can then react with serine and serine hydroxymethyltransferase to regenerate the original cofactor.
What reaction does Methotrexate target?
Methotrexate is a folate analog that inhibits DHFR. Prevents the cofactor in thymidine nucleotide synthesis from being regenerated.
Conclusion: kills cancer cells and other rapidly dividing cells because they do not get the amount of deoxynucleotides required for replication.
What reaction does the drug 5-Fluorouracil target?
5-Fluorouracil is a uracil analog that inhibits thymidylate synthase (TS). Prevents thymidine nucleotide synthesis.
Why does a dietary deficiency of Folate result in Megaloblastic Anemia?
Blood cells cannot synthesize enough DNA to replicate their chromosomes in the abscence of folate (reduced availability of nucleotides).
The few cells and remaining cells grow large because they can’t divide until they replicate their genomes. These megaloblastic cells are most apparent in the bone marrow, but they can also be seen in circulating blood.
How does folate get from the gut to hepatocyte cells?
- Folate is reduced to 5-Methyl THF in intestinal epithelial cells and enters the blood.
- Blood from the intestines goes to the liver via the portal vein.
- Proton Coupled Folate Transporters (PCFT) transfer folate from the blood into hepatocytes.
Folate deficiency before and during pregnancy is associated with what condition?
Spina bifida.
Causes neural tube defects.
Patients who are planning to get pregnant should take folate supplements daily starting one month before getting pregnant and up to three months after conception.
How is dietary Cobalamin (vitamin B12) taken up from the diet?
Vitamin B12 (cobalamin) is found in meat, eggs, and dairy.
How is dietary vitamin B12 (cobalamin) transported from the stomach to the liver?
- Dietary vitamin B12 first binds to R-binder proteins secreted in the stomach.
- R-binder proteins bind to Intrinsic factor which allows the complex to be absorbed by receptors in intestinal epithelial cells.
- Transcobalamin II proteins bind to the complex and transport it through the blood to the liver and other tissues.
- Complex disassociates in the liver and Vitamin B12 is stored in complex with Cubillin.
What condition results from a deficiency in Vitamin B12 (Cobalamin)?
Pernicious Anemia.
(megaloblastic anemia plus neurological problems)
What are some clinical features/symptoms of Cobalamin (Vitamin B12) Deficiency or Pernicious Anemia?
- Anemia
- Big beefy tongue
- Autoimmunie gastritis
- Atrophy of parietal cells
- Numbness
- Ataxia
Metabolism of Cobalamin (Vitamin B12) is important for the production of what two molecules?
- Succinyl CoA (TCA substrate)
- Methionine (essential AA)
What form of Cobalamin is required for the production of Succinyl CoA?
Adenosylcobalamin : Cobalamin bound to an adenine nucleotide.
What form of Cobalamin is required for the synthesis of Methionine?
Methylcobalamin: cobalamin bound to a methyl group.
5-Methyl THF + Cobalamin → Methylcobalamin
Describe the Cobalamin Reaction 1.
(production of Succinyl CoA)
Methylmalonyl CoA + Adenosylcobalamin →
Succinyl CoA
- Methylmalonyl CoA mutase catalyzes the rxn
- rearranges the carboxylic acid to form succinyl CoA (branched chain to straight chain)
- Adenosylcobalamin is not consumed in the rxn.
Describe Cobalamin Reaction 2:
Production of Methionine
Homocysteine + Methylcobalamin → Methionine
- Catalyzed by methionine synthase
- transfer of methyl group from methylcobalamin to homocysteine
- methylcobalamin is regenerated by accepting a methyl from a fully reduced 5-Methyl THF.
Mutations in methionine synthase can result in what condition?
Hyperhomocysteinemia
What problems is hyperhomocysteinemia linked to?
Cardiovascular and Neurological
Hyperhomocysteinemia can result from deficiency in what three things?
- B12 (cobalamin) deficiency
- Methionine synthase
- Vitamin B6 (pyridoxal phosphate) deficiency
Where does the sulfur for cysteine synthesis come from?
Dietary methionine
Methionine can bind to an adenosine nucleoside to become what important molecule?
S-adenosylmethionine (SAM)
donates methyl groups to numerous substrates including precursors to neurotransmitters (e.g. norepinephrine > epinephrine, guanidinoacetate > creatinine, nucleotides > methylated nucleotides, etc).
What is the only metabolic fate of 5-Methyl THF?
To lose its methyl to cobalamin.
What is the methyl trap hypothesis?
Cobalamin deficiency results in functional folate deficiency because all the folate gets “trapped” as 5-methyltetrahydrofolate.
What is glycogen?
- polymer of glucose
- glucose storage molecule for most cell types
What tissues is glycogen most important in and why?
- Heart and Skeletal Muscle
- Serves as a buffer for glucose-6-phosphatase for use within the cell.
- Liver
- serves as a glucose buffer for the blood
How do defects in glycogen metabolism often present?
Fasting hypoglycemia
and
Muscle pain during exercise
What are the two types of carbon-carbon bonds in glycogen?
1-4 bonds: Bonds between the 1 and 4 carbons (make linear chains)
1-6 bonds: Bonds between the 1 and 6 carbons (make branch points)
Bonds between what carbons make linear chains in glycogen?
1-4 bonds
Bonds between what carbons make branch points in glycogen?
1-6 bonds
How does glucose get trapped in the cell?
By phosphorylation.
Hexokinase converts glucose –> G6P which can’t leave the cell.
What is UDP-glucose?
A “charged up” form of glucose that can be broken and recovered to make new carbon-carbon bonds.
- glucose >> G6P
- hexokinase & ATP
- G6P >> G1P
- phosphoglucomutase
- G1P >> UDP-glucose
- UDP glucose pyrophosphorlase & UDP
What molecule makes the first bond to glucose to begin the glycogen chain?
Glycogenin
What protein does insulin signal to dephosphorylate glycogen synthase (which activates the enzyme to start glycogen synthesis)?
Protein phosphatase-1
In the absence of insulin, what molecule is active and phosphorylates glycogen synthase (inactivating the enzyme and inhibiting glycogen synthesis)?
Glycogen Synthase Kinase-3
What enzyme adds UDP-glucose to the growing glycogen chain?
Glycogen synthase
In what direction does elongation of the glycogen chain occur?
The direction of elongation is towards the #4 carbon.
Elongation continues linking glucose in 1-4 bonds undtil the chain is about 11 units long.
Branching enzyme (glycosyl 4 → 6 transferase) cleaves a piece of the glycogen chain off and attaches it to what #carbon?
Branching enzyme attaches the piece of glycogen to the #6 carbon creating 1-6 glycosidic linkage branches.
What are the key enzymes in glycogen synthesis?
Glycogen synthase & Branching enzyme (a.k.a. 4:6 transferase)
A mutation in what enzyme leads to GSD 0, and the subsequent failure to make any glycogen?
Glycogen synthase
A mutation in what enzyme leads to GSD IV, Anderson disease?
Branching enzyme (4:6 transferase)
What advantages does the branching of glucose provide?
- Many opportunities to access glucose
- Makes more active ends so glycogenolysis and glycogenesis can happen VERY rapidly
- does not rely on the expression of new genes
- increases solubility
What are the key enzymes in glycogen degradation (glycogenolysis)?
Glycogen phosphorylase
&
Debranching enzyme complex
(4:4 transferase & alpha-1,6-glucosidase)
What does glycogen phosphorylase do?
Cleaves units of glucose from glycogen chains and adds inorganic phosphate to make G1P.