Viral Diseases Flashcards
HIV Size and Shape
Sphere-shaped enveloped retrovirus Gp120/gp41 protein complex anchored into the envelope
HIV Genetics
Two identical copies of ssRNA, Codes 3 enzymes
- gag (p24, p40, p55): precursor for structural proteins
- pol (p51 reverse transcriptase, p66): Rt and replictaion enzymes (integrase and protease)
- env (gp41): glycoproteins in envelope for fuiosn and attachment
Mechanism of HIV infection
- Targets of HIV: T cells, monocytes, macrophages, NKC, dendritic cells of lymph nodes and organs such as microglial cells of brain
- Adsorption of gp120 onto CD4 receptor; requires CXCR4 co-receptor for entry into T-cell, and CCR5 & CCR2 co-receptors for entry into macrophages
- After entry, viral RNA transrcibed into DNA which integrates with host DNA
- Active infection by viral replication and budding of virions
- Alternatively, HIV remains hidden as provirus in latent infection
- Evades immune system by cell-cell fusion, latent virions in vacuoles inside the cell etc.
Course of HIV Infection
- Acute (Early): high biral replication, flu/mono-like symptoms about 3-6 wks after exposure
- Latent phase: low viral levels as it cleared from circulation, with no apparent symptoms, lasts up to 10 years, CD4 cells gradually destroyed
- Clinical AIDS stage: profound immunosuppression, high virla replication, absolute Th count of <200/µL
Laboratory Results of HIV
Initial viral replication results in increased levels of p24 antigen and viral RNA in host’s blood Decreased CD4 T cell population
HIV Laboratory Monitoring
Four types of tests used in diagnosis and monitoring of HIV infection:
- CD4 Tcell enumeration
- HIV antibody detection
- HIV antigen detection
- HIV nucleic acid detection
CD4 T cell enumeration
- Reported as percentage, absolute cell count, or ratio of CD4:CD8 cells
- If cell count falls below 200/µL, patient is classified as having AIDS (normal range 500-1300/µL)
- Decrease in CD4 count results in an inverted ratio of less than 1:1 for CD4 to CD8 cells (normal is 2:1)
HIV Antibody Detection
- Standard screening method is ELISA
- Standard confirmatory method is Western blot
- Other tests include agglutination tests, dot-blot test, home test kits etc.
HIV Antigen Detection
p24 antigen testing by a solid-phase antigen capture enzyme immunoassay (EIA) P24 antigen becomes undetectable as host produces antibodies, hence can’t be used as screening test like ELISA
HIV Nucleic Acid Detection
Viral load testing by RT-PCR, branced chain DNA assay (bDNA), and nucleic acid sequence based amplification (NASBA) Standard RT-PCR detects 400-750,000 copies of HIV RNA per ml of plasma.
HIV Screening with ELISA
Detects HIV antibody in serum to viral antigens coated onto a solid support
Types of ELISAs:
- 1st generation: detects Abs to HIV-1 only
- 2nd generation: detects Abs to both HIV-1 and HIV-2
- 3rd generation: sandwich method, Abs in serum bind to recombinant HIV-1 and HIV-2 proteins coated onto wells, after washing enzyme-labelled HIV 1 and 2 antigens added which bind to already bound HIV-specific Abs
- 4th generation: simultaneously detects HIV-1 and HIV-2 Abs plus p24 antigen
Problems with ELISA Screening in HIV
False-negative: Serum tested too early, immunosuppressive therapy, hypogammaglobulinemia, Improper handling of kits/reagents
False-positive: Repeated freeze-thawing of specimens, autoreactive antibodies, Multiple pregnancies, Severe hepatic disease, Malignancies, Passive immunoglobulin therapy
Positive HIV Confirmations
When any serum sample comes ELISA positive for HIV, repeat the ELISA for a second time for presence of HIV-antibodies in patient’s serum.
Second-time positive cases are confirmed by Western blot/HIVD
Immunoassay for separated HIV antigens (p24, p31, and gp41 or gp120) treated with patient serum. Western blot is considered positive when at least two out of three possible antibodies are detected in patient’s serum.
Vaccine Models
- Recombinant Protein Vaccine: HIV gp120 protein vaccine, marketed as AIDSVAX is in Phase III trials
- Safer to use Attenuated Viral Vaccine: Can trigger both humoral and cellular IR
- Risk of reversion DNA Vaccine: Plasmid based DNA vaccine IR produced not protective enough
- Prime Boost Strategy: Marketed as “DNA plus MVA” vaccine candidate contains genetically engineered plasmid plus modified vaccinia Ankarastrain virus
Current HIV Treatment
- Highly Active Anti-retroviral Therapy (HAART)
- Reverse transcriptase inhibitors
- Protease inhibitors
- Integrase inhibitors
- Fusion inhibitors
Liver Function Tests (Hepatitis)
- Bilirubin
- Alanine Aminotransferase (ALT)
- Aspartate Aminotransferase (AST)
Serum levels are elevated in proportion to the amount of liver damage (enzymes are contained within the hepatocytes, inflammation causes their release; Bilirubin rises as liver damage continues)
Acute Viral Hepatitis Tests
- anti-HAV: an IgM antibody directed against Hepatitis A (HAV)
- HBsAg (hepatitis B surface antigen),
- anti-HBc: an IgM antibody directed against the hepatitis B core antigen
- anti-HCV: antibody to Hepatitis C (HCV)
Hepatitis A
- Route of Transmission: Fecal-oral
- Chronic Infection: No (acute)
- Prevention: pre/post exposure immunization
- Member of the picornavirus family; various serotypes include rhinoviruses (common cold)
- Non-enveloped – strand RNA packaged within capsids with icosahedral symmetry
- Only hepatitis virus that can be propagated in tissue culture
Hepatitis B
- Route of Transmission: Percutaneous, Permucosal
- Chronic Infection: Yes
- Prevention: pre/post exposure immunization
- Long incubation period
Hepatitis C
- Route of Transmission: Percutaneous, Permucosal
- Chronic Infection: Yes
- Prevention: Blood Donor Screening, Behavior Modification
- Longer incubation than A but shorter than B
- Typically asymptomatic but high rate of progression to cirrhosis and HPC (Hepatic Cancer)
Hepatitis D
- Route of Transmission: Percutaneous, Permucosal
- Chronic Infection: yes, low risk with coinfection
- Prevention: pre/post exposure immunization, behavior modification
- Coinfection needed with Hepatitis B
Hepatitis E
- Route of Transmission: Fecal-oral
- Chronic Infection: No (acute)
- Prevention: Ensure safe drinking water
- Average incubation: Average 40 days, Range 15-60 days
Causes of Hepatitis A Infection
From close personal contact, child care, nursing homes, contaminated food, water HAV infects cells of the intestinal mucosa and, following replication, gains access to blood, then is delivered to Liver cells to replicate, the viral progeny accumulate in bile fluid and are delivered back to the GI tract
ALT
Alanine aminotransferase, is a hepatocyte-specific activity that is released into circulation following hepatocellular necrosis
Used as marker for disease progression
Hepatitis B Panel
This panel consists of four hepatitis B markers:
- HBsAg
- HBeAg
- anti-HBe
- anti-HBs
- IgM antibody to the core antigen (anti-HBc IgM) may also be included
Markers for Chronic Hepatitis Infections
- Three markers are used to determine the stage of chronic infection: HBsAg, HBeAg, and anti-HBc total
- HBsAg and anti-HBc total will almost always be present
- Depending on the stage of the disease, HBeAg may or may not be present,
- Chronically infected individuals with HBeAg typically have higher viral loads
HBV Vaccinations
- 1st generation HBV vaccine: surface antigen purified from chronically-infected individuals and inactivated by a variety of techniques. Still used in many third world countries
- Current vaccine: HBsAg subunit vaccine produced in yeast
Immunity Testing in HBV
- Anti-HBs (antibody to the surface antigen) is the only marker for determining immunity to a HBV
- Anti-HBs appears early and the titer may eventually decline.
Percutaneous Transmission of HCV
- Injecting drug use
- Clotting factors before viral inactivation
- Transfusion, transplant from infected donor
- Therapeutic (contaminated equipment, unsafe injection practices)
- Occupational (needlestick)
Perinatal Transmission of HCV
Transmission only from women HCV-RNA positive at delivery
No association with:
- Delivery method
- Breastfeeding
Mononucleosis Facts
- Widely disseminated, ubiquitous
- 95% of the world’s population is exposed to this virus
- Adults: usually have protective antibodies to EBV