Valencik Carb Metabolism Flashcards
What are the 4 things that pyruvate can turn into & how?
- Lactate; reduction
- acetyl CoA; oxidative decarboxylation
- oxaloacetate; carboxylation
- alanine; transamination
Pyruvate dehydrogenase only works under ___ conditions. Describe this step in detail.
aerobic conditions.
Pyruvate–>Acetyl CoA
requires NAD+; gives off NADH
Also produces CO2
Where does pyruvate dehydrogenase do its thing?
in the mitochondrial matrix. The pyruvate is transported across the membrane.
Pyruvate dehydrogenase is a ____ enzyme that causes a ____ reaction.
alpha ketoacid dehydrogenase
irreversible reaction
Aside from pyruvate dehydrogenase, what is another example of alpha ketoacid dehydrogenase?
alpha ketoglutarate dehdyrogenase
Oxidative decarboxylation is an ______ reaction.
irreversible
What are the 3 catalytic enzymes that make up the pyruvate dehydrogenase complex?
E1: on the outside…pyruvate dehydrogenase
E2: in the core…DLTA: dihydrolipoyl transacetylase
E3: in the core…DLDH: dihydrolipoyl dehdyrogenase
What are the 5 coenzymes that make up the pyruvate dehydrogenase complex?
TPP: thiamine pyrophosphate CoA: coenzyme A NAD+ FAD+ Lipoamide
What are the vitamins that are required for the coenzymes of pyruvate dehydrogenase to work?
TPP-- requires thiamine (B1) CoA--requires panthothenic acid (B5) NAD--requires niacin (B3) FAD--requires riboflavin (B2) Lipoamide--doesn't require anything
Beri Beri is caused by a deficiency of what? What 3 things build up in the body as a result? This can impair CNS function etc.
thiamine deficiency
pyruvate, lactate, alanine (after you eat lots of carbs)
**body can’t make acetyl CoA very easily
TPP contains what ring? It carries what 2 things? It is bound noncovalently to what?
thiazolium
pyruvate
hydroxyethyl group
apoprotein
Lipoamide is required for which enzyme that is a part of the pyruvate dehydrogenase complex?
required for E2: the outer edge: a part of DLTA
How is the lipoate attached to the E2 enzyme?
bound covalently w/ an amide linkage to the lysine
synthesized directly onto the E2 enzyme to form the lipoyl domain…never free
T/F There is free lipoic acid that is a part of the E2 enzyme.
False. B/c the lipoic component of the E2 enzyme is synthesized directly on there–>it is not ever freely hanging around.
What does lipoic acid do in the pyruvate dehdyrogenase complex?
participates in redox & carries an acetyl group
What does coenzyme A help activate? What complex is this a part of?
DLTA/E2
pyruvate dehydrogenase complex
What vitamin does coenzyme A require?
Vitamin B5; pantothenic acid
What are 2 things that are required for activation of DLDH? dihydrolipoyl dehydrogenase
NAD+ & FAD
Talking NAD+ here.... What vitamin does it require to be active? What enzyme component does it activate? Of what complex? What is its function?
VItamin B3; Niacin
DLDH
Pyruvate Dehydrogenase Complex
Hydride Transfers
With NAD & FAD…unlike CoA…??? Talk about a carbon.
The number 3 carbon in adenosine is not phosphorylated in NAD & FAD.
talking FAD here... What vitamin is required to make it active? What enzyme component does it activate? Of what complex? What is its function?
Vitamin B2; Riboflavin FAD is the active form of riboflavin DLDH Pyruvate Dehydrogenase Complex Electron transfers
Aside from the enzymes we have been talking about (the 3 special ones) what are 2 other enzymes that are attached to the pyruvate dehydrogenase complex for the purpose of their regulation?
PDH kinase (4 isoforms) PDH phosphatase (2 isoforms)
What is the purpose of PDH Kinase & PDH Phosphatase?
They regulate the activity of the pyruvate dehydrogenase complex. When the kinase does its thing & phosphorylates the complex–>it is inactive. When the phosphatase does its things & dephosphorylates it, it is active.
Called reversible covalent phosphorylation.
Overall: You start with pyruvate & end up with ____. You use the ____ _____ complex. You add in what 5 things? You get out what 3 things?
acetyl CoA pyruvate dehydrogenase complex NAD FAD TPP Lipoamide CoA You get: acetyl CoA (obviously) & NADH & CO2!!!
Talking from glucose to the TCA cycle…what requires O2 & what doesn’t? And where does everything happen?
Glycolysis doesn’t require O2.
Conversion into Acetyl CoA & TCA cycle both happen in the cytosol of the mitochondrion. They both require O2.
What nutrients turn into acetyl CoA eventuallY?
All the major ones!!! Carbs Fats Proteins Alcohol
What does acetyl CoA turn into?
TCA or... Acetylated Products Cholesterol Ketone Bodies Fatty Acids
So…what is Danielle’s amazing phrase for TCA & what does each stand for?
Can: Citrate I: Isocitrate Keep: alpha ketoglutarate Selling: Succinyl CoA Sex: Succinate For: Fumarate Money: Malate Officer: Oxaloacetate
Show the math. 1 glucose molecule…how much energy from TCA??
1 glucose 2 pyruvate 2 acetyl CoA 4 CO2 6 NADH=18 ATP 2 FADH2=4 ATP 2 GTP=2ATP Overall: 1 glucose (from TCA) = 24 ATP
What is the efficiency of glucose oxidation?
40%
How does glucose travel in the blood?
attached to albumin
What are the 3 sources of blood glucose?
food
glycogen degradation
gluconeogenesis
How long is food good for as a source of blood glucose?
a few hours after a meal
The _____ stores ____ of glycogen & supplies it for up to a ____ period of time.
liver stores 100 g of glycogen & supplies it for up to 24 hours
How much energy is consumed in degrading glycogen to put it into the blood? Is this process slow or fast?
no energy consumed–>free process
Fast!!!!
In the process of gluconeogenesis, what 2 organs start the process? What 3 things do they use to do it?
Liver & Kidneys amino acids lactate glycerol the 3 things listed above are all non-carbohydrate substrates
Is the liver or the kidneys a greater source of glucose for the blood?
The liver–by far!! 90% of the source!!
What is the only source of glucose for the blood after prolonged fasting?
the liver!! thru gluconeogenesis
What are 2 cycles that depend on the liver’s gluconeogenesis & then the delivery of that glucose to other tissues?
Cori Cycle (glucose-lactate cycle) Alanine Cycle (glucose-alanine cycle)
In gluconeogenesis, most of the enzymes are the same as glycolysis (just in reverse) except for which steps? Why?
the 3 irreversible energy waterfall steps.
These require different enzymes
Steps 1, 3, 10
Which enzymes replace steps 1, 3, & 10 in gluconeogenesis?
Step 1: glucose 6 phosphatase
Step 3: fructose 16 bisphosphatase
Step 10: Part 1: Pyruvate–>OAA (pyruvate carboxylase)
Part 2: OAA–>PEP (PEP carboxykinase)
What is the function of glucose 6 phosphatase? What process is it involved in?
Where is this enzyme found?
G6P–>Glucose
Gluconeogenesis
Endoplasmic Reticulum
What is the function of fructose 16 bisphosphatase? What process is this involved in? Where is this enzyme found?
Fructose 16 BP–>Fructose 6P
Gluconeogenesis
Cytoplasm
What is the function of PEP carboxykinase?
What process is this involved in? Where is this enzyme found?
OAA–>PEP
gluconeogenesis
Cytoplasm or mitochondria
What is the function of pyruvate carboxylase?
What process is this involved in? Where is this enzyme found?
Pyruvate–>OAA
gluconeogenesis
mitochondria
Which enzyme involved in gluconeogenesis is biotin dependent?
pyruvate carboxylase
Explain the bypass process in gluconeogenesis.
Need to convert pyruvate–>PEP.
Transport pyruvate across the mitochondrial membrane.
Convert to OAA thru pyruvate carboxylase (ATP dependent)
Either:
Stay in the mitochondrion.
Or leave the mitochondrion via malate or aspartate.
Convert OAA to PEP via PEP carboxykinase (GTP dependent)
What is the net cost of the bypass of gluconeogenesis?
1 ATP & 1 GTP per pyruvate
What is the driving force for the bypass in gluconeogenesis?
The fact that there is so much ATP & GTP & Pyruvate in the cell.
So…if the glucose 6 phosphatase enzyme is found on the luminal membrane of the ER….how does that help with gluconeogenesis???!!!
Well…there is a G6P transporter into the ER.
The G6Pase is on the luminal surface of the ER. It converts the G6P into Glucose & Pi.
There is a transporter to get the glucose & Pi out of the ER.
What is von Gierke’s Disease?
it is a disease caused by a defect in either the G6P transporter into the ER or the G6Pase. Sad.
What are 2 efficient feed-ins for gluconeogenesis b/c they are readily converted to pyruvate? What converts them?
Lactate (lactate dehydrogenase)
Alanine (a transaminase)
What is totally awesome about the conversion of lactate to pyruvate?
You don’t get any loss of NADH, b/c it generates NADH thru this conversion.
What do the cori & alanine cycles have in common?
They both convert into pyruvate & are then shuttled into the mitochondria to become OAA. Then they are shuttled back out to become glucose.
How many times must the Cori or alanine cycle be run in order to generate a glucose molecules?
TWICE!!!