Unit II Week 1 Flashcards
Positive vs. negative energy balance
Positive energy balance: following meal ingestion when nutrients are being distributed between tissues and stored for later use (nutrient excess, fed state)
Negative energy balance: previously stored nutrients are mobilized to provide energy and substrates for metabolic process (fasted state, illness, exercise)
Components of Total Energy Expenditure (TEE) (3)
1) Resting metabolic rate (RMR)
2) Thermic Effect of Food (TEF)
3) Energy Expended in Physical Activity (EEPA)
(including Non-Exercise activity thermogenesis (NEAT))
Resting metabolic rate (RMR)
accounts for 75% of total energy expenditure in sedentary people
Primary determinant of RMR is fat free mass (lean body mass)
Measuring/estimating RMR
Measured by:
-indirect calorimetry: measures respiratory gas composition and flow rates to estimate O2 consumption and CO2 production → rate of oxygen consumption at rest is indirect measure of energy expenditure
Estimated from: age, sex, height, weight
Thermic Effect of Food (TEF)
What is it?
________ has the highest TEF
_______ has the lowest TEF
accounts for about 8% of total energy expenditure
Energy cost of digesting and distributing nutrients from the diet to tissues of the body
Types of nutrients and TEF:
- Protein = highest TEF (highest energy cost of digestion)
- Carbs then fat = lowest TEF
Energy Expended in Physical Activity (EEPA)
most variable - can account for 30-40% of total daily expenditure for highly active people
Non-Exercise activity thermogenesis (NEAT)
component of EEPA, energy expended in a movement that is “unconscious” or unplanned (e.g. fidgeting)
TEE can be measured most accurately by using method called _________ - measure O2 consumption in free living individuals over weeks
“doubly labeled water”
Energy intake = _________ if ________ is stable
EI = TEE if weight is stable → a measure of total energy expenditure accurately predicts energy intake if weight is stable
Pool sizes of stored
Fat
Carbs
Protein
Fat - contain greatest amount of stored energy (roughly 120,000 kcal, 9 kcal/g)
Carbohydrate - 2,000 kcal (4 kcal/g) - mostly stored as glycogen in muscle/liver
Protein - protein does not have a readily accessible storage pool
If person is on protein balance, and fat/carbs are overfed then …
carbohydrate will be oxidized and fat will be stored
→ individual in positive energy balance will accumulate body fat
Anabolic vs. Catabolic Processes
Anabolic process = synthesize complex molecules from simpler ones
Catabolic process = process of breaking down complex molecules to simpler ones
Glycolysis overview
glucose present in excess in blood relative to intracellular concentration (e.g after eating) → glucose tends to enter cell and move down pathway of glycolysis
Linked enzyme pathway
Located in cytoplasm
Breaks down six-carbon parent molecule → two three carbon molecules of pyruvate + ATP + NADH
If there is no O2 or mitochondria then pyruvate → lactate (anaerobic metabolism)
TCA cycle overview
in presence of O2 and mitochondria
Pyruvate → Acetyl CoA –> CO2, GTP (ATP), NADH, and FADH2
Occurs in mitochondrial matrix
Starts with one acetyl group (2C) (acetyl CoA) and 2 CO2 leave
Oxaloacetate regenerated at end, no net removal of oxaloacetate
Important for converting intermediates
Electron transport overview
proteins in inner membrane of mitochondria that take NADH and FADH2 produced in TCA cycle to produce ATP from ADP
Consumes O2, produce H2O
aka Oxidative phosphorylation
Gluconeogenesis overview
new glucose production using carbon skeletons from other tissues (lactate, amino acids, glycerol) for use in brain during fasting
Occurs in liver (and some in kidneys)
Glycogen
stores glucose available in excess, polymer of glucose
Most stored in liver and skeletal muscle
Important immediately available energy source
Pentose Phosphate Pathway (Hexose Monophosphate shunt) overview
Detour from path of glycolysis
Activated when glucose present in excess or there is need for molecules the pathway produces
Generates NADPH and ribose (5 carbon) sugars
NADPH → energy for synthesis of fatty acids and steroid hormones and important for defending cells against oxidative stress
Ribose → key for RNA and DNA
Triacylglycerol (triglyceride) Synthesis (De Novo Lipogenesis) overview
energy consuming process that converts glucose → fat for storage
Glucose present in excess within liver cell or adipocyte → rise in acetyl-CoA within mitochondria
Acetyl-CoA can be used to make fatty acids derived from glucose for storage
3 fatty acids + 3 carbon alcohol glycerol → triglyceride (fat stored in adipose, and secreted from liver in triglyceride rich lipoproteins/VLDL)
Triacylglycerol Degradation, Beta-Oxidation and Ketogenesis
body in negative energy balance, and stored fat used for energy to oxidizing tissues as an alternative to glucose
Frees glucose up for the brain which cannot oxidize fat directly
Fasting state - general overview
insulin is low, glucagon is high
body relies on previously stored nutrients
Stored nutrients broken down into component building blocks (glucose, fatty acids, amino acids) and moved to energy requiring tissues to meet energy needs
Building blocks enter relevant tissue and are catabolized by linked enzymatic pathways → chemical modification (oxidation) → stored potential energy released and converted into usable form (ATP or NADPH)
Fed state - general overview
Insulin is high, glucagon is low, task of body is to assimilate ingested nutrients
Oxidation
transfer of electrons from reduced molecule to acceptor molecule
Km
concentration at which reaction is half max
Low Km → substrates have strong affinity for enzyme and reaction will go at low substrate concentrations
Vmax
maximum rate of reaction
High Vmax → reaction that can produce lots of product over short time
Pyruvate fate in presence of O2
Pyruvate is an important hub/branch point for related pathways
In presence of O2: mitochondria, and right metabolic environment
→ enter TCA cycle to be completely oxidized to CO2 and H2O
OR synthesized into fatty acids
In Mitochondria: Pyruvate → Acetyl-CoA (2 carbon compound) → TCA cycle → electron transport
Fate of pyruvate in absence or O2 or mitochondria
pyruvate → lactate and exported from call
Regenerates NAD from NADH → allows glycolysis to continue
TCA cycle as a flexible process
In setting of energy surplus, acetyl CoA from glycolysis can enter TCA cycle and leave without being oxidized to be used in fatty acid synthesis
Pyruvate from AA metabolism or lactate can enter TCA cycle as oxaloacetate and leave mitochondria to begin synthesis of glucose via gluconeogenesis
Regulation of flux through a pathway: (5 main things)
1) Amount of substrate available
2) Levels/amount of key enzyme available
3) Allosteric regulation
4) Covalent modification of a key enzyme
5) Hormonal regulation (insulin, and counter-regulatory hormones glucagon, catecholamine, growth hormone, cortisol)
Fed State:
_____ high ______ low
________ and ________ pathways are active allowing glucose to be ________________
_______ and _______ pathways are inactive
Insulin acts to __________ enzymes
high insulin, counterregulatory hormones low
Glycolysis and glycogen synthesis are ACTIVE, glucose assimilated by peripheral tissues
Gluconeogenesis and glycogen breakdown are reduced
Insulin dephosphorylates enzymes
Fasting state
_____ high ______ low
________ and ________ pathways are active
Counterregulatory hormones act to ___________ enzymes
low insulin, high counterregulatory hormones
Gluconeogenesis and glycogen breakdown increased
Counterregulatory hormones phosphorylate enzymes
Glu4 transporter
present on tissues that respond to insulin (aka insulin sensitive tissues → skeletal muscle and adipose tissue)
Increases glucose transport into cell with insulin exposure
Glu2 transporter
present in liver, no response to insulin (insulin independent)
3 important reactions of glycolysis, enzymes responsible, and why they are important
1) activation of glucose (glucose –> G-6-P) (via hexokinase or glucokinase)
- input of ATP, traps glucose inside cell
2) Fructose-6-P + ATP → Fructose 1,6-bisphosphate + ADP (via PFK1)
- 2nd input of ATP
3) Phosphoenol pyruvate + ADP –> pyruvate + ATP (via pyruvate kinase)
- synthesis of ATP by substrate level phosphorylation
hexokinase
Not very selective
Present in all cells
Low Km (0.1mM) for sugars
Inhibited by G-6-P
glucokinase
Selective for glucose - the more glucose in blood, the more it takes up
Liver, pancreatic B-cells
High Km (10mM) for glucose
Inhibited by fructose-6-P
Why is it good we have hexokinase and glucokinase in different tissues?
what happens when blood glucose is high?
what happens when blood glucose is low?
Blood glucose high → excess blood glucose transported into hepatocytes where glucokinase converts it to G-6-P
Blood glucose low → glucokinase activity lower, reduces “trapping” of glucose in liver, and increases delivery of glucose to peripheral tissues containing hexokinase
*Prevents active glycogen synthesis in liver when blood glucose is low, and allows delivery of glucose to peripheral tissues
What happens when you add a phosphate to glucose (glucose –> G-6-P) (3)
1) Trapped in cell
2) Conserves metabolic energy (from ATP)
3) Phosphate group binds active site of next enzyme → lower activation energy and increase specificity of next reaction
Glycolysis:
Step 2
G-6-P –> ____________
Fructose-6-P
phosphofructokinase 1 (PFK1)
catalyzes what reaction?
why is it important?
Fructose-6-P + ATP → Fructose 1,6-bisphosphate + ADP
-Allosteric enzyme (ATP/citrate inhibits, AMP stimulates)
MAJOR point of regulation
Rate limiting step, committed step, irreversible
Phosphofructokinase 2 (PFK2)
catalyzes Fructose-6-P + ATP → fructose 2,6-bisphosphate (potent activator of PFK1)
kinase (add P) or phosphatase (remove P, back to F-6-P)
fructose 2,6-bisphosphate
Inhibits _____________
Activates __________
INHIBITS F-1,6-bisphosphatase (enzyme of gluconeogenesis)
ACTIVATES PFK1
PFK2 activity (and Fructose-2,6-BP) is high during the _______ state and low during the _______ state
high during FED state –> increase rate of glycolysis
low during FASTING state
How does starvation reduce the activity of PFK2?
Starvation…low insulin, high glucagon
→ cAMP-dependent protein kinase A (PKA) phosphorylates PFK-2
→ F2,6BP converted back to F6P → inhibit glycolysis and promote gluconeogenesis
NADH is generated during what step of glycolysis?
what is the significance of this?
cleavage step –> two 3-Carbon compounds
2 Glyceraldehyde-3-phosphate + 2 NAD+Pi ← → 2 1,3-bisphosphoglycerate + 2 NADH + 2H+
NADH must be reoxidized to NAD+ for glycolysis to continue
pyruvate kinase
catalyzes what reaction?
why is it important?
2 phosphoenolpyruvate + 2 ADP → 2 pyruvate + 2 ATP
Irreversible reaction
2nd substrate level phosphorylation
What activates pyruvate kinase? (1)
What inhibits pyruvate kinase? (3)
F-1,6-BP ACTIVATES pyruvate kinase
ATP, alanine, and protein kinase A (PKA) INHIBIT pyruvate kinase → promote of gluconeogenesis, inhibit glycolysis when sufficient energy substrate for gluconeogenesis and increased glucagon
Pyruvate kinase deficiency
2nd most common cause of enzyme deficiency linked hemolytic anemia (after G6PD deficiency)
Pyruvate dehydrogenase (PDH)
multienzyme complex located in mitochondrial matrix - pyruvate → acetyl CoA
uses coenzymes and vitamins (Essential to cofactors)
Made up of both a kinase and a phosphatase
Coenzymes of PDH (5)
Coenzyme A
Thiamine pyrophosphate (TPP)
Flavin adenine dinucleotide (FAD)
Nicotinamide adenine dinucleotide (NAD)
Lipoate
Vitamins essential to cofactors of PDH:
________ –> Thiamine pyrophosphate
________ –> FAD
__________ –> NAD
__________–> Coenzyme A
Thiamine (B12) → TPP
Riboflavin (B2) → FAD
Niacin → NAD
Pantothenate → coenzyme A
Thiamine deficiency
Wernicke’s encephalopathy, inability to oxidize pyruvate (fuel for brain)
Diagnosed by high levels of pyruvate in blood
Mutation in PDH subunit
similar consequence as thiamine deficiency, can also present as heart failure (Beriberi) (glucose important for heart)
Allosteric regulation of PDH
Activated by… (3)
Inhibited by…(4)
ATP, acetyl coA, NADH, and fatty acids → inhibit
AMP, CoA, NAD+ → activate
PDH activity during fasting state
Fasting = PDH inactive in phosphorylated state
-Kinase part of PDH complex does this
Fasting → liver inhibits PDH, prevent pyruvate from producing acetyl CoA, and redirect to gluconeogenesis
Kinase activity of PDH is activated by ________ and inhibited by _________
Phosphatase activity of PDH is stimulated by ________
Kinase stimulated by ATP, inhibited by pyruvate
Ca2+ stimulates phosphatase
Activity of PDH during fed state
Fed → PDH active in de-phospho state (insulin high, ADP high)
Phosphatase in PDH complex removes P, activates complex
Lactate dehydrogenase
catalyzes what reaction?
Pyruvate lactic acid
bidirectional
Fed vs. fasting fates of pyruvate
Fed: pyruvate –> _______ for ________ and ________ for __________
Fasting: pyruvate → ___________ for _________
Fed: pyruvate →
- Alanine (AA used for protein synthesis), requires addition of Nitrogen
- Acetyl CoA for fatty acid synthesis
Fasting: pyruvate →
Oxaloacetate (by pyruvate carboxylase) for gluconeogenesis
Key Reactions of TCA cycle:
Reaction 1: condensation of acetyl CoA (2C) + _________ (4C) → ________ (6C)
Catalyzed by ___________
Key Reactions of TCA cycle:
Reaction 1: condensation of acetyl CoA (2C) + Oxaloacetate (4C) → Citrate (6C)
Catalyzed by citrate synthase
Key Reactions of TCA cycle:
Citrate –> ________ –> ___________
Citrate –> isocitrate –> a-ketoglutarate
Key Reactions of TCA cycle:
___________ catalyzes conversion of isocitrate → a-ketoglutarate
This reaction produces ________ and _________
isocitrate dehydrogenase
First CO2 produced, first NADH produced
Key Reactions of TCA cycle:
a-ketoglutarate –> __________
catalyzed by _____________
This reaction produces ________ and _________
a-ketoglutarate → succinyl CoA
Catalyzed by a-ketoglutarate dehydrogenase
Second CO2 and NADH formed
Key Reactions of TCA cycle:
succinyl-CoA –> _________
catalyzed by ___________
succinate → fumarate
Catalyzed by succinate dehydrogenase
Succinate dehydrogenase
why is it special?
succinate + FAD → fumarate + FADH2
Enzyme bound to inner mitochondrial membrane with FAD
Electrons from FADH2 directly passed to coenzyme Q in electron transport chain
Part of TCA cycle and electron transport system
Key Reactions of TCA cycle:
fumarate –> _________
catalyzed by _________
Fumarate → Malate
Enzyme = fumarase
Key Reactions of TCA cycle:
Malate –> _________
catalyzed by _________
this reaction generates _______
malate → oxaloacetate
Enzyme = malate dehydrogenase
3rd NADH
Main intermediates of the TCA cycle (5)
1) Citrate
2) A-ketoglutarate
3) Succinyl CoA
4) Fumarate
5) Oxaloacetate and Malate
Citrate
where fatty acid synthesis begins
Acts as feedback inhibitor of PFK1
A-ketoglutarate
entrance point for number of AAs that contribute to gluconeogenesis
Succinyl CoA
entrance point for AAs and breakdown products of fatty acids
Fumarate
entrance point for AAs and by product of urea cycle
Oxaloacetate and Malate are intermediates of the TCA cycle that are both involved in __________
involved in gluconeogenesis
Oxidative Phosphorylation
Couples ATP production to stepwise flow of electrons from NADH and FADH2 to O2 in the electron transport chain
Protein gradient created across inner mitochondrial membrane drives ATP formation (chemiosmotic coupling)
Electron Transport Chain Complexes I, III, IV
Complexes located on inner mitochondrial membrane
NADH → NAD+ in complex I → coenzyme Q transports e-
→ complex III → cyto C
→ complex IV → O2 e- acceptor
e- flow through successive complexes generating H+ gradient across inner mitochondrial membrane → generate ATP via ATP synthase (ADP → ATP)
Inherent proton leak in electron transport chain
Some inherent proton leak → accounts for consumption of oxygen at rest = Basal Metabolic Rate
Electron Transport Chain Complex II
part of TCA cycle also, converts (succinate → fumarate, generates FADH2)
Substrates (5) and products (4) of oxidative phosphorylation
Substrates = NADH, FADH2, O2, Pi, ADP
Products = NAD, FAD, H2O, ATP
Respiratory control
O2 consumption depends on availability of ADP, prevents excess generation of free radicals (high ADP, high O2 use)
Oligomycin
drug that prevents ATP synthesis, causes NADH and FADH2 to build up → inhibit TCA cycle → cell relies on glycolysis for energy → increase serum lactate levels
Carbon monoxide poisoning
Hgb cannot release O2 → inhibit electron transport chain
Uncoupling protein
dissipates H+ gradient across inner mitochondrial membrane without ATP generation, lost as heat
Used in brown adipose tissues
Proliferator-activated receptor gamma coactivator 1 alpha (PGC1a)
key molecular mediator of mitochondrial proliferation
Mitochondrial number/function found critical for health and metabolic diseases
Source of carbons for gluconeogenesis (3)
1) Lactate
2) Amino Acids
- Especially alanine and glutamine (converted to pyruvate and a-ketoglutarate)
- Can also enter via oxaloacetate
3) Glycerol (generated from hydrolysis of triglycerides)
Cori cycle:
Glucose –> ___________ formed in ________ and _________
–> diffuses into ________ and taken up in the ________
once there, what happens?
Glucose → lactate formed in RBCs (no mitochondria) and skeletal muscle (vigorous exercise or limited O2)
→ diffuses into BLOOD → taken up in LIVER
Lactate → pyruvate in liver → used for gluconeogenesis
Gluconeogenesis occurs during (3)
1) Fasting, vigorous exercise, low carb/high protein diet
2) Under conditions of stress when counter regulatory hormones are high
3) In states of insulin resistance and type 2 diabetes
Glycogen reserves last ________ days, after this, glucose must be…
Glycogen reserves only last 1-2 days, after this, glucose must be synthesized to maintain normal blood glucose and cell function
First main step of gluconeogenesis (5 steps)
OVERALL: Pyruvate –> PEP
Pyruvate → OAA → Malate –> OAA –> Phosphoenolpyruvate
Key steps of gluconeogenesis:
Pyruvate → oxaloacetate
Pyruvate is transported into the _________ and acted on by ___________ enzyme
this reaction requires ______ and _______
mitochondria
pyruvate carboxylase
requires ATP and coenxyme biotin
Allosteric regulation of pyruvate carboxylase
Pyruvate → oxaloacetate
Acetyl-CoA in mitochondria activates pyruvate carboxylase (indicating we don’t need energy)
When acetyl-CoA low → oxaloacetate oxidized by PDH to acetyl-CoA and put into TCA cycle
biotin deficiency
biotin deficiency → build up pyruvate (cannot activate pyruvate carboxylase to convert pyruvate –> OAA)
Pyruvate → lactic acid → lactic acidosis
Key steps of gluconeogenesis
Oxaloacetate → Malate
why does this step need to happen?
what enzyme is responsible and where is it located?
OAA must be converted to Malate to leave mitochondria
Via Malate Dehydrogenase (mitochondria)
Key steps of gluconeogenesis
Malate → oxaloacetate
why does this reaction happen?
what enzyme does this?
Needed to convert to malate so it could be transported out of mitochondria
Once malate is in CYTOSOL it needs to be converted back to OAA so it can eventually become PEP
Via malate dehydrogenase (cytosol)
Key steps of gluconeogenesis:
OAA –> Phosphoenolpyruvate
what else is required for this reaction?
what important enzyme does this and where is it located in the cell?
OAA + GTP → Phosphoenolpyruvate + CO2 + GDP
**Requires energy input (GTP)
Via Phosphoenol pyruvate carboxykinase (PEPCK)* in cytosol
Phosphoenol pyruvate carboxykinase (PEPCK)
what reaction does it catalyze
OAA + GTP → Phosphoenolpyruvate + CO2 + GDP
Where do the 1 ATP and 1 GTP used to go from pyruvate –> PEP come from?
Source of ATP is oxidation of fat
3 main bypass reactions of gluconeogenesis:
1) Pyruvate → OAA → Phosphoenolpyruvate
2) Fructose 1,6 Bisphosphate → Fructose 6 Phosphate
3) Glucose-6-Phosphate → Glucose
Fructose 1,6 Bisphosphatase
what reaction does it catalyze?
Fructose 1,6 Bisphosphate → Fructose 6 Phosphate
main bypass reaction #2 for gluconeogenesis
Regulation of Fructose 1,6 Bisphosphatase
Regulated opposite to PFK1
Allosteric regulation: AMP and Fructose 2,6 BP inhibit Fructose 1,6 Bisphosphatase
Hormonal regulation: Insulin low, glucagon high → promote gluconeogenesis
Glucose-6-Phosphatase
catalyzes what reaction?
Glucose-6-Phosphate → Glucose
3rd main bypass step in gluconeogenesis
Where is Glucose-6-Phosphatase located
where in cell?
what type of cells?
located in membrane of endoplasmic reticulum of hepatocytes and kidney cells ONLY
NOT in brain, muscle, or other tissues
G-6-P transported into ER → glucose → transported out of cell
Von Gierke’s Disease
AR deficiency of G-6-Phosphatase in liver
Normal glycogen but have severe fasting hypoglycemia, ketosis, lactic acidosis, enlarged liver and kidneys
Location of gluconeogenesis
Mostly occurs in cytosol
Pyruvate carboxylase and Malate dehydrogenase located in mitochondria
Fatty acids and gluconeogenesis
NO net conversion of fatty acids to glucose in mammals
2 carbons that enter TCA cycle as acetyl CoA (via Beta-oxidation) leave as CO2 → no net carbon contribution to glucose synthesis
BUT fatty acids DO provide ENERGY for gluconeogenesis via their oxidation
Role of kidney and liver in gluconeogenesis
Liver: primary site for gluconeogenesis
-Glucose leaves liver → other tissues to supply needed energy
Kidney: capacity for gluconeogenesis, responsible for 20% of whole body glucose production during prolonged starvation
Structure of glycogen
why is this structure important?
highly branched polymer of glucose monomers
Ideal for rapid mobilization of glucose for blood glucose and energy
Depleted in 12-24 hours