Unit 1: Introduction to Macromolecules Flashcards

1
Q

How do the macromolecules contribute to the cell?

A

1) Lipids: cell/organelle membranes
2) Proteins: enzymes, structure
3) Carbohydrates: structure, energy
4) Nucleic acids: DNA, RNA

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2
Q

polymer

A

a complex organic molecule made up of repeated simpler units connected by covalent bonds

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3
Q

proteins (2)

A
  • the key structural and functional molecules that do the work of the cell, providing structural support and catalyzing chemical reactions
  • the term “protein” is often used as a synonym for “polypeptide”
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4
Q

nucleic acid

A
  • polymer of nucleotides that encodes and transmits genetic information
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5
Q

carbohydrate

A
  • an organic molecule containing C, H, and O atoms that provides a source of energy for metabolism and that forms the starting point for the synthesis of all other organic molecules
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6
Q

lipids

A
  • a hydrocarbon molecule that is soluble in non-polar solvents but not water
  • lipids store energy, act as signalling molecules, and are a component of cell membranes
  • loose and diverse group of macromolecules that are based on one or more long chains of carbon and hydrogen (C–C and C–H), defining feature is their hydrophobic region (tail) connected to a hydrophilic region (head)
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7
Q

peptide bonds (2)

A
  • a covalent bond that links the carbon atom in the carboxyl group of one amino acid to the nitrogen atom in the amino group of another amino acid
  • bonds linking protein monomers together and involves the loss of a water molecule
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8
Q

phosphodiester bonds (3)

A
  • a bond that forms when a phosphate group in one nucleotide is covalently joined to the sugar unit in another nucleotide
  • relatively stable bonds and form the backbone of a DNA strand
  • bond involves the loss of a water molecule
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9
Q

glycosidic bonds

A
  • a covalent bond that attaches one monosaccharide to another between the carbon 1 of one monosaccharide and the hydroxyl group carried by a carbon atom in a different monosaccharide molecule
  • involves loss of a water molecule
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10
Q

What are the the monomers of the macromolecule polymers?

A
  • proteins are polymers of amino acids
  • nucleic acids are the polymers of nucleotides
  • carbohydrates are the polymers of simple sugars or monosaccharides
  • lipids are the polymers of fatty acids
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11
Q

What is the importance of functional groups to macromolecule polymerization and directionality?

A
  • many functional groups are polar, molecules that contain these groups–molecules that would otherwise be nonpolar–become polar (introduce directionality)
  • as a result, these molecules become soluble in cell’s aqueous environment and disperse in solution throughout the cell, and become reactive
  • reactions joining simpler molecules into polymers usually take place between functional groups
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12
Q

What is the general structure of an amino acid?

A
  • each amino acid contains a central carbon atoms, called the alpha carbon
  • the alpha carbon is covalently linked to four groups: an amino group (–NH2), a carboxyl group (–COOH), a hydrogen atom, and an R group or side chain that differs from one amino acid to the next
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13
Q

DNA

A
  • genetic material in all organisms
  • it is transmitted from parents to offspring and contains the information needed to specify the amino acid sequence of all proteins synthesized in an organism
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14
Q

RNA

A
  • multiple functions: key player in protein synthesis and the regulation of gene expression
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15
Q

What are nucleotides composed of?

A
  • a 5-carbon sugar, a nitrogen-containing compound called a base, and one or more phosphate groups
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16
Q

How do the sugars in RNA and DNA differ?

A
  • the sugar in RNA is ribose and the sugar in DNA is deoxyribose
17
Q

What are the bases of nucleotides built of and what are they?

A
  • nitrogen-containing rings
  • pyrimidine bases have a single ring and include cytosine, thymine, and uracil
  • purine bases have a double ring structure and include guanine and adenine
18
Q

What bonds exist between bases of nucleotides?

A
  • hydrogen bonds
19
Q

What is the chemical formula for a monosaccharide?

A
  • C6H1206
20
Q

What are monosaccharides?

A
  • carbons that arent carrying groups carry one hydroxyl (–OH) group and one hydrogen atom
  • monosaccharides are unbranched carbon chains with either an aldehyde (HC double bonded to O) or a ketone group (C double bonded to O)
  • monosaccharides with an aldehyde group are called aldoses and and those with a ketone group are called ketoses
21
Q

How do monosaccharides form rings?

A
  • one end of the chain bonds to another part of the chain: the carbon in the aldehyde or ketone group forms a covalent bond with the oxygen of a hydroxyl group carried by another carbon in the same molecule
  • when the ring is formed, the aldehyde oxygen becomes a hydroxyl group
22
Q

What makes monosaccharides highly soluble in water?

A
  • the presence of the polar hydroxyl groups through the sugar ring
23
Q

How do lipids differ from proteins, nucleic acids, and carbohydrates?

A
  • proteins, nucleic acids, and carbohydrates are all polymers made up of smaller, repeating units with a defined structure
  • lipids are not defined by a chemical structure, instead they share a particular property: lipids are all hydrophobic
  • because lipids share a property rather than a structure, lipids are a chemically diverse group of molecules
24
Q

fatty acids

A
  • long chain of carbon atoms attached to a carboxyl group (–COOH) at one end
  • glycerol is a 3-carbon molecule with OH groups attached to each carbon
  • carboxyl end of each fatty acid chain attaches to the glycerol at one of the OH groups, releasing a water molecule to form a triacylglycerol
25
Q

saturated fatty acid (3)

A
  • fatty acids that do not contain double bonds
  • maximum hydrogen atoms attached to each carbon atom, so all the carbon atoms are “saturated” with hydrogen atoms
  • chains are straight
26
Q

unsaturated fatty acids

A
  • fatty acids that contain carbon-carbon double bonds

- chains have a kink at each double bond

27
Q

Why are triacylglycerols extremely hydrophobic?

A
  • electrons are distributed uniformly over the whole molecule, so the whole molecule is uncharged
28
Q
  • What kind of interactions occur between fatty acid molecules?
A
  • constant motion of elections lead to regions of slight positive and slight negative charges
  • these charges either attract or repel electrons in neighbouring molecules, inducing charges in the other molecule
  • temporary charges weakly bind to one another when near to one another and many of them acting together can help stabilize molecules
29
Q

What affects the melting point of fatty acids

A
  • dependent on the length and level of saturation of the fatty acid
  • as length of hydrocarbon chain increases, the number of interactions between the chain also increases: the melting temperature increases because more energy is required to break a greater number of bonds
  • kinks from double bonds reduce tightness of molecular packing which decrease the number of interactions: as a result, the malting temperature is lowered
30
Q

What bonds are used to turn monomers into macromolecules

A
  • covalent bonds for polymerization

- non covalent interactions (mostly) for macromolecular assembly

31
Q

polarity

A
  • the two ends of the macromolecule chain are distinct from each other chemically (molecule is asymmetric with 2 chemically distinct ends)
32
Q

directionality

A
  • you (and cells) can determine which end you are moving towards by observing the polarity of the units as you move past them
33
Q

What do lipids use to hold fatty acids in place?

A
  • ester linkages
34
Q

What is the N-terminus and the C-terminus?

A
  • the N-terminus is the end with the nitrogen group in a amino acid
  • the C-terminus is the end with the carbon group in a amino acid
35
Q

What is proteins monomer name and covalent bond name?

A
  • amino acid

- peptide bond

36
Q

What is nucleic acids monomer name and covalent bond name?

A
  • nucleotide

- phosphodiester bond

37
Q

What is carbohydrates monomer name and covalent bond name?

A
  • monosaccharide

- glycosidic bond

38
Q

What is lipids monomer name and covalent bond name?

A
  • fatty acid

- ester linkage