Tricarboxylic Acid Cycle Flashcards

1
Q

Names of the Tricarboxylic Acid Cycle

A

TCA Cycle, Krebs Cycle, Citric acid cycle

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2
Q

TCA is the final pathway where the ___________ of __________, ________, and ________ converge and their carbon skeletons being converted to _____.

A

Catabolism, carbohydrates, amino acids, fatty acids, CO2

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3
Q

Catabolic Pathways of TCA

A

Breakdown of some amino acids provides certain TCA cycle intermediates

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4
Q

Anabolic Pathways of TCA

A

Some TCA cycle intermediates feed into biosynthetic pathways, such as the synthesis of certain amino acids

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5
Q

What two molecules provide most of the energy, due to the terminal oxidation of all biomolecules?

A

NADH & FADH2

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6
Q

What is the TCA cycle coupled with? Mainly referring to the oxidative phosphorylation of the reduced carriers (NADH and FADH2)

A

Production of ATP in the ETC

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7
Q

where is the TCA cycle located?

A

The mitochondrial matrix (close to the ETC)

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8
Q

Linear Metabolic Pathway

A

Starts with 1 metabolite and ends up with a different one (glycolysis)

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9
Q

Cycle

A

starts with a certain metabolite that undergoes multiple steps forming different intermediates…but in the end the same initial metabolite is regenerated.

No net loss, no net gain.

Aka why it’s a CYCLE

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10
Q

Reaction required prior to TCA

A

Oxidative phosphorylation of pyruvate

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11
Q

steps of Oxidative Phosphorylation of Pyruvate

A
  1. Transported into the mitochondria
    - by a mitochondrial pyruvate carrier or limited simple diffusion
  2. Converted into Acetyl CoA by Pyruvate dehydrogenase complex
    - often called PDH
  3. CO2 must be released and NADH must be produced
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12
Q

What transports Pyruvate into the mitochondria?

A

Mitochondrial Pyruvate carrier

Or

Limited simple diffusion

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13
Q

What enzyme converts Pyruvate into Acetyl CoA?

A

Pyruvate Dehydrogenase (complex) or PDH

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14
Q

PDH

A

Protein aggregate of 3 separate enzymes:

E1: P-carboxylase
E2: dihydrolipoyl transacetylase
E3: dihydrolipoyl dehydrogenase

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15
Q

Cofactors of PDH

A
Thiamine pyrophosphate, TPP
Lipoma idle
Coenzyme A (CoA)
FAD
NAD+
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16
Q

Regulation of PDH

A

phosphorylation DEACTIVATES PDH

Dephosphorylation ACTIVATED PDH

Subject to substrate activation

Subject to product inhibition

17
Q

Is PDH a reversible step?

A

NOPE DEF IRREVERSIBLE

18
Q

PDH can be activated by:

A
Pyruvate
NAD+
ADP
Ca2+ (muscle)
CoA
19
Q

PDH can be deactivated by:

A

Acetyl CoA
NADH
ATP

20
Q

Steps of TCA Cycle

A
  1. Synthesis of citrate from Acetyl CoA and oxaloacetate
  2. Isomerization of citrate
  3. Oxidative decarboxylation of isocitrate
  4. Oxidative decarboxylation of alpha-ketoglutarate
  5. Cleavage of succinyl CoA
  6. Oxidation of succinate to fumarate
  7. Hydration of fumarate
  8. Oxidation of malate to oxaloacetate
21
Q

Citrate is a precursor for _________ and an inhibitor for ________

A

fatty acid synthesis, PFK1

22
Q

What is suicide inhibition?

A

When the Isomerization of Citrate is potently inhibited by fluoroacetate which results in citrate accumulation

23
Q

What are the irreversible steps of TCA?

A

Citrate synthesis, Oxidative decarboxylation of isocitrate, and Oxidative decarboxylation of alpha-ketoglutarate

Steps 1, 3 and 4

24
Q

What is the rate limiting step of TCA?

A

Oxidative decarboxylation of isocitrate

25
Q

Which steps of TCA yield NADH?

A

Steps 3, 4, 8

Oxidative decarboxylation of isocitrate, oxidative decarboxylation of alpha-ketoglutarate, and oxidation of malate

26
Q

Which steps release CO2?

A

Steps 3, 4

ox Decarboxylation of isocitrate, and ox decarboxylation of alpha-ketoglutarate

27
Q

Which step yields FADH2?

A

6

Oxidation of succinate to fumarate

2 h-atoms are transferred to FAD

28
Q

Summary of TCA cycle:

A
2 C-atoms enter the cycle
2 CO2 released
3 NADH produced
1 FADH2 produced
1 GTP produced
29
Q

Which step yields GTP? Significance?

A

5

Cleavage of succinyl CoA

It is readily converted to ATP

Due to substrate level phosphorylation

30
Q

How much total ATP is produced via TCA by one glucose molecule?

A

12 ATP

9 by NADH
2 by FADH2
1 by GTP

31
Q

ATP production in TCA may be reduced if…

A

The ETC is not working efficiently (net yield will be lower)

32
Q

What is the total ATP per glucose thus far?

A

38 ATP

33
Q

What is the net consumption/production of OAA?

A

No net consumption/production of oxaloacetate. Or any other intermediate.