Translation Flashcards
Where are the proteins synthesised?
In cytoplasm on ribosomes
How are amino acids join together?
Via condensation reactions which joins the COOH to NH2
What order is the series of residues in the proteins?
Nitrogen to Carboxl
What direction does RNA read in?
5 prime to 3 prime
How many tRNA sites are on a ribosome abs what are they?
3 sites
E P A SITE
What is the role of the ribosomes?
Reads mRNA and translates it to an amino acid sequence and assembled the amino acids into a linear polymer
Name 3 types or RNA and their roles
mRNA codes for proteins
rRNA
tRNA- adapter molecules carries amino acids in activated forms to the ribosome for protein synthesis
What did Brenner and Crick discover in relation to the codons?
Codons contain 3 bases and non overlapping reading frame.
How many tRNA bind to a ribosome at one time?
2 bind at a time
Name the 3 sites on a ribosome and their roles
P (Peptidly) site - other tRNA
A (aminoacyl) site - where initiator tRNA binds carrying amino acid
E(exit) site
Describe the DNA sequence/ how it is read.
Triplet Code
Degenerate
Non-overlapping
No punctuation
What is the 3 letter code of the initiation codon and what does it code for?
AUG (also known as fMet)
Methionine
Describe base pair wobbling
There are more possible codons than tRNAs hence the codons dont have perfect base pairing
There are how many codons?
And how many tRNAs?
64 possible codons and 45 tRNA
Name the 4 types of base pairing involved in base pairing
Cognate- perfect base pairing and wobble in 3rd base
Near cognate- wobble in first base
Non-cognate - no base pairing
What is the importance of inosine?
Inosines on tRNA gives greater wobble in 3rd position
Which nucleotide of the anticodon loop needs to be ‘good enough’ for translation?
3rd nucleotide
State the equation that shows how amino acids are activated
ATP + amino acid -> Aminoacyl adenylate + PPi
State the equation for the formation of Aminoacyl-tRNA
Aminoacyl adenylate +tRNA –> Aminoacyl-tRNA + AMP
Describe elongation
fMet addition 2nd tRNA in A-site Peptidyl reaction ( 23S rRNA) rachet from P-site to E-site 3rd tRNA in A site
Name the 3 stages of translation
Initiation
Elongation
Termination
How is the relationship between transcription and translation differ in bacteria and eukaryotes?
Transcription and translation are coupled in bacteria but not in Euk.
Name the 3 stop codons
UAA
UAG
UGA
Describe termination
Stop codon is read and release factor is recruited to A-site and chain is released
Name the 4 examples of errors in the coding
Missense (same charge)
Silent (diff. protein same aa
nonsense (stop codon)
Frameshift/base deletion
Which types of ribosomes do antibiotics work on
70S not 80S