The Structure and Function of Large Biological Molecules Flashcards
4 Classes of Biological Molecules
Carbohydrates, Lipids, Proteins, Nucleic Acids
Macromolecules
built from polymers (long molecules with similar or identical blocks linked by covalent bonds) - Carbohydrates, Lipids, Proteins
Monomers
small building blocks that make polymers
Enzymes
specialized molecules that speed up chemical reactions (facilitate the synthesis and breakdown of polymers)
Dehydration reaction
links 2 monomers together, removes hydroxyl group from one side and H from another (H2O)
Hydrolysis
disassembles polymer, breaks bond between monomers and adds hydroxyl group to one side and H to another (adds H2O)
Monosaccharides
simple sugars, build complex polymers, come in multiples of CH2O (ie: C6H12O6, glucose)
Classification
aldose or ketose, size of carbon skeleton (triose - 3, pentose - 5, hexoes - 6)
Glucose structure
is a hexoes, has 6 carbon ring labeled in clockwise order (ie: 1 prime, 2 prime, etc.)
Disaccharide
2 monosaccharides joined by a glycosidic linkage (dehydration reaction)
Polysaccharides
macromolecules with many monosaccharides joined together
Lipids
are all hydrophobic, consist mostly of hydrocarbon regions
Types of Lipids
fats, phospholipids, steroids
Fats
constructed from glycerol and fatty acids
Fatty acids
long carbon skeleton (16 or 18 atoms) with carboxyl group and hydrocarbon chain
Fat/Triglyceride
3 fatty acids + glycerol joined by a ester bond (glycerol gives H from hydroxyl group and fatty acid gives HO from carboxyl group) - dehydration reaction
Saturated fatty acid
has no double bond in hydrocarbon
Unsaturated fatty acid
has double bond in hydrocarbon
Phospholipids
2 fatty acids + glycerol + phosphate group, Hydrocarbon tail (hydrophobic), phosphate group and attachments (hydrophilic), are arranged in a bilayer with hydrophobic tail protected (forms boundary between cell membrane and internal and external aqueous solutions)
Proteins
are all constructed from 20 amino acids, linked by polymers -> polypeptide, made of 1+ polypeptides in a 3d structure
Amino Acid
Amino Acid - amino group + carboxyl group + side chain (R) + alpha carbon + H
Classification
based on biological properties in side chains (Non-polar R - hydrophobic, Polar R - hydrophilic, Acidic R - negative, Basic R - positive)
Protein Dehydration Reaction
left amino acid gives OH from carboxyl, right amino acid gives H from amino group (Dehydration reaction)
4 Levels of Protein Structure
Primary Structure, Secondary Structure, Tertiary Structure, Quaternary Structure
Primary Structure
linear chain of amino acids
Secondary Structure
coils and folds in polypeptide backbone because of hydrogen bonds
Tertiary Structure
structure of polypeptide because of side chain interactions, hydrophobic side chains avoid contact with water by hiding in core of protein, hydrogen bonds bind positive and negative side chains
Quaternary Structure (some proteins)
association of multiple polypeptides (collagen, hemoglobin)