The roles of ATP in living cells and mechanisms of production part 2 Flashcards

1
Q

what is the role of pyruvate in metabolism

A

lactate (lactate dehydrogenase)
oxaloacetate (pyruvate carboxylase)
Acetyl-CoA (pyruvate dehydrogenase complex)
Alanine (alanine aminotransferases)

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2
Q

what happens to pyruvate under aerobic conditions

A

Under aerobic conditions, conversion to acetyl-CoA for oxidation and complete degradation
Occurs in mitochondria
Inner mitochondrial membrane highly selectively permeable

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3
Q

where does glycolysis occur

A

Glycolysis occurs in cytosol (can proceed in presence and absence of O2) – pyruvate transported into mitochondria for complete oxidation

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4
Q

how is pyruvate transported into the mitochondria

A

Occurs via specific carrier protein embedded in mitochondrial membrane in aerobic conditions

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5
Q

how is pyruvate converted to Acetyl-CoA

A

Pyruvate undergoes oxidative decarboxylation by pyruvate dehydrogenase complex to form Acetyl-CoA
pyruvate+CoA+NAD+>Acetyl-CoA+CO2+NADH+H+
Reaction is irreversible and link between glycolysis and citric acid cycle
Catalysed by PDH complex – 3 enzymes and 5 coenzymes

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6
Q

What is the tricarboxylate acid cycle

A

Aka citric acid or krebs cycle
Final common pathway for oxidation of fuel molecules
Acetyl residues (CH3-CO-) are oxidised to co2
Reducing equivalents transferred to NAD+ or FAD to form NADH and FADH2

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7
Q

what is an overview of the TCA cycle

A

4CU condenses with 2CU
Eventually 2 carbons leave cycle as CO2 and the 4CU regenerated
C2
C6-(NADH CO2)-C5-(NADH CO2)-C4-(GTP FADH2 NADH)-C4-START
Involves 4 oxidation-reduction reactions (NADH and FADH2 production) and one ATP is produced for each round

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8
Q

What are the 8 intermediates in the TCA cycle

A
acetyl-coa
citrate
isocitrate
a-ketoglutarate
succinyl-CoA
succinate
fumarate
L-malate
oxaloacetate
After class I keep some specific factors more or-less
A certificate in karma sutra should further my orgasm
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9
Q

what are the important enzymes of the TCA cycle

A

citrate synthase - condensation

isocitrate dehydrogenase and a-ketoglutarate dehydrogenase - oxidative decarboxylation

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10
Q

how is the TCA cycle regulated

A

Flow of carbon atoms from pyruvate into and through the TCA cycle is tightly regulated at 2 levels
1 conversion of pyruvate to acetyl-CoA (PDH reaction)
2 entry of acetyl-CoA into TCA cycle (citrate synthase reaction)
Also regulated at isocitrate dehydrogenase and a-ketoglutarate dehydrogenase reactionsIrreversible reactions are main regulatory points

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11
Q

what alters the TCA cycle

A

High ATP, acetyl-CoA, NADH, fatty acids inhibit cycle

High AMP, CoA, NAD+, Ca2+ increase rate of cycle

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12
Q

what other compounds feed into the TCA cycle

A

Fatty acids and some amino acids can be a source of Acetyl-CoA

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13
Q

how are the components of the TCA cycle important

A

important biosynthetic intermediates
Replenished by anaplerotic reactions
Conc of TCA intermediates in dynamic balance

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14
Q

what are the products of the TCA cycle

A
Products of TCA cycle 
3 NADH, 1 FADH2, 1 GTP (ATP)
2 CO2 also 
Glucose – 2 pyruvate – 2 acetyl-CoA
glycolysis -pyruvate and NADH
NADH and FADH2 oxidised by mitochondrial ETC
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15
Q

What is the issue of NADH and the mitochondrial membrane

A

Inner mitochondrial membrane impermeable to NADH and no carrier in membrane
Electrons from NADH enter
2 shuttles
The glycerol-3-phosphate – esp in brain and muscles
The malate-aspartate – in liver and heart
Act to regenerate NAD+ to make 1.5 to 2.5 moles of ATP

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16
Q

what is the glycerol-3-phosphate shuttle

A
NADH+H+-NAD+
DHAP-Glyercol-3-P
via G3P dehydrogenase 
G3P to mitochondria to DHAP and out
G3P DH FAD-FADH2 to ETC to 1.5 ATP using NADH e-
17
Q

what is the malate aspartate shuttle

A

Aspartate-oxaloacetate-malate (NADH + H+ to NAD+)
malate into mitochondria same as above NADH+H+ to ETC
a-KG via decarboxylate carrier to glutamate via clx-asx carrier