The Behavior of Proteins: Enzymes Flashcards

1
Q

How much faster is a reaction with the fastest enzyme than without a catalyst?
a. About 10 times faster.
b. About 100 times faster.
c. About 1,000 times faster.
d. About 10,000 times faster.
e. About 1020 times faster.

A

e

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2
Q

As catalysts, enzymes are
a. significantly less effective than nonenzymatic catalysts
b. slightly less effective than nonenzymatic catalysts
c. significantly more effective than nonenzymatic catalysts
d. slightly more effective than nonenzymatic catalysts
e. exactly the same as nonenzymatic catalysts

A

c

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3
Q

The rate of a reaction depends on
a. the free energy change
b. the activation energy
c. the enthalpy change
d. the entropy change

A

b

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4
Q

Enzymatic activity has an optimum temperature because
a. the component amino acids have varying melting points
b. the rate of reactions is thermodynamically controlled
c. the side chains of essential residues are chemically degraded at higher temperatures
d. raising the temperature speeds up the reaction until protein denaturation sets in
e. the organism dies beyond a certain temperature

A

d

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5
Q

The main difference between a catalyzed and an uncatalyzed reaction is that
a. the activation energy of the catalyzed reaction is lower.
b. the catalyzed reaction has a more favorable free energy change.
c. the catalyzed reaction has a more favorable enthalpy change.
d. the catalyzed reaction has a more favorable entropy change.

A

a

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6
Q

Which of the following is not true?
a. In thermodynamics, spontaneous does not mean instantaneous or even fast.
b. If a reaction is spontaneous then it has a negative ΔG.
c. Speed of a reaction is a kinetic parameter, not a thermodynamic one.
d. A reaction with a positive ΔG^0 can never happen

A

d

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7
Q

What effect does a catalyst have on the ΔG° of a reaction?
a. A catalyst lowers the ΔG°.
b. A catalyst raises the ΔG°.
c. A catalyst has no effect on the ΔG°.
d. It depend on the specific catalyst.

A

c

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8
Q

Which of the following is most directly related to the speed of a reaction?
a. The temperature
b. The ΔG^0 of the reaction
c. The ΔG of the reaction
d. The ΔG^0‡ of the reaction
e. None of these is correct.

A

d

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9
Q

A rate constant is
a. the rate of a reaction at standard temperature and pressure.
b. the rate of a reaction at equilibrium.
c. a proportionality constant relating the rate of a reaction to the concentration(s) of the reactant(s).
d. a kind of transition state.

A

c

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10
Q

The rate of a reaction is always dependent on the concentration(s) of the reactant(s).
a. True
b. False

A

b

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11
Q

All catalysts work by lowering the activation energy for a reaction.
a. True
b. False

A

a

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12
Q

The amount of energy released during a reaction tells nothing about the rate at which that reaction will occur.
a. True
b. False

A

a

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13
Q

Thermodynamically favorable reactions all release energy.
a. True
b. False

A

a

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14
Q

The sign of Gibb’s Free Energy is positive (“+”) when energy is released.
a. True
b. False

A

b

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15
Q

Which of the following is true about lactate dehydrogenase (LDH)?
a. There are two types of subunits, H amd M, that combine to form 5 types of isozymes
b. An increase in H-based isozymes was once used to diagnose heart attacks
c. An increase in blood levels of LDH of any kind is indicative of some sort of problem
d. One type of LDH has only H subunits
e. All of the choices

A

e

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16
Q

The order of a reaction can be determined from the balanced equation for the reaction.
a. True
b. False

A

b

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17
Q

The kinetic order of a reaction
a. can be determined by inspection from the coefficients of the balanced equation
b. must be determined experimentally
c. always depends on the concentration of enzyme
d. never depends on concentrations of reactants

A

b

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18
Q

Given the rate law, rate = k[A][B], the overall reaction order is
a. zero
b. one
c. two
d. cannot be determined

A

c

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19
Q

First order kinetics means:
a. The rate of a reaction is independent of the amount of reactant measured.
b. The rate of the reaction varies directly with the amount of reactant measured.
c. The rate of the reaction varies with the square of the amount of the reactant measured.
d. More information is needed to answer this question.
e. None of these is correct.

A

b

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20
Q

The active site of an enzyme
a. is frequently located in a cleft in the enzyme.
b. is the portion of the enzyme to which the substrate binds.
c. contains the reactive groups that catalyze the reaction.
d. all of these are correct

A

d

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21
Q

The substrate will only bind to the enzyme when the shapes fit together rigidly.
a. True
b. False

A

b

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22
Q

In the induced-fit model of substrate binding to enzymes
a. the substrate changes its conformation to fit the active site
b. the active site changes its conformation to fit the substrate
c. there is a conformational change in the enzyme when the substrate binds
d. there is aggregation of several enzyme molecules when the substrate binds

A

c

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23
Q

The E-S complex often shows as a slight depression in the energy profile for the reaction.
a. True
b. False

A

a

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24
Q

The active site of an enzyme is the place where the following happens:
a. The enzyme substrate complex forms here.
b. The catalytic reaction happens here.
c. Allosteric regulation of enzyme rate occurs here.
d. The enzyme-substrate complex forms and the reaction occurs at the active site.
e. All of these are correct

A

d

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25
Q

Which of the following is implied by induced fit between the enzyme’s active site and the substrate?
a. The enzyme is a flexible molecule.
b. An enzyme will work equally well with different substrates.
c. An active site can bind to different substrates.
d. The enzyme is a flexible molecule so different substrates can bind.
e. All of these are correct

A

e

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26
Q

Which of the following is true?
a. The E-S complex often dissociates with no reaction taking place.
b. The E-S complex must form before a reaction can take place
c. Once the E-S complex forms, it can go on to form product or dissociate to E + S
d. All of these are correct

A

d

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27
Q

Which of the following is true about the enzyme chymotrypsin?
a. The enzyme can cleave peptides.
b. The enzyme can cleave esters.
c. The enzyme only binds to aromatic substrates.
d. The enzyme can cleave substrates which are not naturally occurring.
e. All of these are correct

A

e

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28
Q

The reaction catalyzed by aspartate transcarbamoylase is
a. the first step in the synthesis of amino acids.
b. the first step in the synthesis of fatty acids.
c. the first step in the synthesis of CTP and UTP.
d. is part of glycolysis.

A

c

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29
Q

In the reaction catalyzed by chymotrypsin, a graph in which the rate is plotted against the concentration of substrate
a. is sigmoidal, characteristic of an allosteric enzyme
b. shows that cooperative kinetics are observed
c. shows that the reaction is zero order
d. is hyperbolic, characteristic of a nonallosteric enzyme

A

d

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30
Q

In the reaction catalyzed by aspartate transcarbamoylase, a graph in which the rate is plotted against the concentration
of substrate
a. is sigmoidal, characteristic of an allosteric enzyme
b. shows that noncooperative kinetics are observed
c. shows that the reaction is zero order
d. is hyperbolic, characteristic of a nonallosteric enzyme

A

a

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31
Q

The Michaelis-Menten approach to describing the kinetics of an enzyme-catalyzed reaction makes which of the
following assumptions about the conversion of product into substrate?
a. The product binds reversibly to the enzyme in order to be converted into the substrate.
b. The product is not converted to substrate to any appreciable extent.
c. The product is converted to substrate following simple first order kinetics.
d. The product is converted to substrate following simple second order kinetics.

A

b

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32
Q

The initial rate of an enzymatic reaction is usually determined in order to assure that
a. the enzyme is active
b. there is no reverse reaction of product to the enzyme-substrate complex
c. the substrate is not used up
d. the experiment can be completed quickly

A

b

33
Q

According to the steady-state assumption
a. the product concentration does not change significantly
b. the substrate concentration is large and does not change significantly
c. the concentration of enzyme-substrate complex remains constant with time
d. the free enzyme concentration is always in great excess to the concentration of enzyme-substrate complex

A

c

34
Q

Most enzyme reactions display first order kinetics for the individual substrates when the substrate concentration is
low.
a. True
b. False

A

a

35
Q

When the substrate concentration is low, an enzyme reaction
a. will display zero-order kinetics.
b. will display first-order kinetics.
c. will display second-order kinetics.
d. will denature and cease to function.

A

b

36
Q

When an enzyme is saturated with substrates,
a. it will display zero-order kinetics.
b. it will display first-order kinetics.
c. it will display second-order kinetics.
d. it will denature and cease to function.

A

a

37
Q

The Michaelis constant is
a. related to the molecular weight of the enzyme
b. a measure of the resistance of the enzyme to denaturation
c. a reflection of the percentage of polar amino acids in the enzyme
d. a rough measure of the affinity of the enzyme for the substrate

A

d

38
Q

The KM expression is equal to
a. (k1 + k2) / k−1
b. (k−1 + k2) / k1
c. (k1 + k−1) / k2
d. k−1 / k1

A

b

39
Q

Which of the following are related for a given enzyme?
a. Vmax, KM, and percentage of α-helix
b. Vmax, kcat, and percentage of β-sheet
c. Vmax, kcat, and turnover number
d. Vmax, KM, and molecular weight
e. None of these are related in any way

A

c

40
Q

The Michaelis constant is
a. the rate constant for the formation of the substrate-enzyme (E-S) complex.
b. the rate constant for the breakdown of the substrate-enzyme (E-S) complex to form free enzyme and substrate.
c. the rate constant for the breakdown of the substrate-enzyme (E-S) complex to form free enzyme and product.
d. a compilation of several rate constants for the reaction.

A

d

41
Q

The drug acetazolamide:
a. Is used to help fight altitude sickness
b. Was found to ruin the taste of carbonated beverages
c. Does not affect the taste of non-carbonated liquors
d. Causes its effect on taste by inhibiting carbonic anhydrase 4
e. All of these

A

e

42
Q

The substrate-enzyme (E-S) complex
a. always proceeds to form the products rapidly.
b. always breaks down to form free enzyme and substrate.
c. always breaks down to form free enzyme and product.
d. may break down to form free enzyme and substrate, or free enzyme and product.

A

d

43
Q

When an enzyme-catalyzed reaction has two substrates and substrate A must bind before substrate B, the mechanism
is called
a. a ping-pong mechanism
b. a random mechanism
c. an ordered mechanism
d. a suicide mechanism
e. none of these is true

A

c

44
Q

Which of the following is true concerning a ping-pong mechanism?
a. Either substrate can bind first
b. Either product can leave first
c. One product leaves before the second substrate binds
d. One product leaves before either substrate has bound
e. none of these are true

A

c

45
Q

A Lineweaver-Burk plot is useful in the analysis of enzymatic reactions because
a. it is easier to see whether points deviate from a straight line than from a curve
b. it is not affected by the presence of inhibitors
c. it can be used whether or not the enzyme displays Michaelis-Menten kinetics
d. all of the above

A

a

46
Q

The steady state of an enzyme reaction is the following:
a. The rate observed just after mixing the enzyme and substrate.
b. The rate observed and Vmax.
c. The rate of product formation.
d. The state which exists when E-S complex is forming as fast as it is breaking down.
e. The state which exists when substrate concentration equals KM.

A

d

47
Q

If the y-intercept of a Lineweaver-Burk plot = 1.91 (sec/millimole) and the slope = 75.3 L/sec, Vmax equals:
a. 0.0254 millimoles per second.
b. 0.523 millimoles per second.
c. 5.23 millimoles per second.
d. 39.4 millimoles per second.
e. 75.3 millimoles per second.

A

b

48
Q

If the y-intercept of a Lineweaver-Burk plot = 1.91 (sec/millimole) and the slope = 75.3 L/sec, KM equals:
a. 0.0254 millimolar (mM).
b. 0.523 millimolar (mM).
c. 5.23 millimolar (mM).
d. 39.4 millimolar (mM).
e. 75.3 millimolar (mM).

A

d

49
Q

The Michaelis constant determines the Vmax of an enzymatic reaction.
a. True
b. False

A

b

50
Q

It is important that at physiological conditions, enzymes work at Vmax.
a. True
b. False

A

b

51
Q

Which of the following statements regarding the Michaelis constant is false?
a. It is similar to the affinity constant between the enzyme and substrate.
b. The dimension for the Michaelis constant is concentration, such as molarity.
c. The Michaelis constant determines the Vmax.
d. It is the substrate concentration necessary to reach 1/2 Vmax.

A

c

52
Q

To study the nature of an enzyme, Vmax is not as good a measurement as the catalytic rate constant kcat because:
a. The Vmax is not a true constant since it depends on the concentration of enzyme
b. The Vmax cannot be measured
c. The Vmax is only valid for allosteric enzymes
d. none of these

A

a

53
Q

The KM of hexokinase for glucose = 0.15 mM and for fructose, KM = 1.5 mM. Which is the preferred substrate?
a. Glucose.
b. Fructose.
c. Neither substrate is preferred over the other.
d. You cannot tell from the data given.
e. None of these answers is correct.

A

a

54
Q

Competitive inhibitors have this effect:
a. Modifying the KM value.
b. Changing the value for Vmax.
c. Interfering with substrate binding.
d. This type of inhibitor both changes the KM and interferes with substrate binding.
e. All of these are correct.

A

d

55
Q

Which of the following inhibitors binds to the enzyme at a site other than the active site?
a. competitive inhibitor
b. noncompetitive inhibitor
c. irreversible inhibitor
d. all of these
e. none of these

A

b

56
Q

Inhibitors can have the following effects on enzyme kinetics:
a. Modifying the KM value.
b. Changing the value for Vmax.
c. Interfering with substrate binding.
d. An inhibitor can change the KM and interfere with substrate binding.
e. All of these are correct.

A

e

57
Q

The value of Vmax changes in
a. competitive inhibition
b. noncompetitive inhibition
c. both forms of inhibition
d. neither form of inhibition

A

b

58
Q

The fundamental difference between competitive and noncompetitive inhibition is
a. the degree of cooperativity of the reaction
b. the size of the active site of the enzyme
c. the manner of binding of substrate to the enzyme
d. the manner of binding of inhibitor to the enzyme

A

d

59
Q

Which of the following is more likely to inhibit regulatory subunits of an allosteric enzyme?
a. A competitive inhibitor
b. A non-competitive inhibitor
c. An irreversible inhibitor
d. All of these are equally likely to inhibit a regulatory subunit

A

b

60
Q

For competitive inhibition
a. the value of KM decreases
b. the value of Vmax decreases
c. it is possible to overcome the effect of the inhibitor by increasing the concentration of substrate
d. none of the above

A

c

61
Q

Irreversible inhibitors of enzymatic reactions
a. bind to the enzyme only at low temperatures.
b. affect only serine side chains.
c. react with the enzyme to produce a protein that is not enzymatically active and from which the original
enzyme cannot be regenerated.
d. are bound to the enzyme by the lock-and-key mechanism.

A

c

62
Q

A noncompetitive inhibitor
a. binds to the enzyme at a site other than the active site
b. is structurally related to the substrate
c. does not affect the value of Vmax
d. decreases the value of KM

A

a

63
Q

What effect is seen on a Lineweaver-Burk graph when a competitive inhibitor is added?
a. The y-intercept is changed, but not change the slope of the line.
b. The slope of the line is changed, but not the y-intercept.
c. Both the y-intercept and the slope of the line are changed.
d. Neither the y-intercept not the slope of the line is changed.

A

b

64
Q

What effect is seen on a Lineweaver-Burk graph when a mixed-type inhibitor is added?
a. The y-intercept is changed, but not change the slope of the line.
b. The slope of the line is changed, but not the y-intercept.
c. Both the y-intercept and the slope of the line are changed.
d. Neither the y-intercept not the slope of the line is changed.

A

c

65
Q

Generally speaking, a competitive inhibitor and the substrate cannot both bind to the enzyme at the same time.
a. True
b. False

A

a

66
Q

What effect is seen on a Lineweaver-Burk graph when a non-competitive inhibitor is added?
a. The y-intercept is changed, but not change the slope of the line.
b. The slope of the line is changed, but not the y-intercept.
c. Both the y-intercept and the slope of the line are changed.
d. Neither the y-intercept not the slope of the line is changed.

A

a

67
Q

Non-competitive inhibitors have this effect:
a. Modifying the KM value.
b. Changing the value for Vmax.
c. Interfering with substrate binding.
d. This type of inhibitor both changes the Vmax and interferes with substrate binding.
e. All of these are correct

A

b

68
Q

If an inhibitor changes the slope of the Lineweaver-Burk graph, but not the y-intercept, it is this type of inhibition:
a. Competitive.
b. Non-competitive.
c. Mixed Inhibition (uncompetitive inhibition).
d. You cannot tell from the data given.
e. More than one answer is correct.

A

a

69
Q

If an inhibitor changes the slope of the Lineweaver-Burk graph, but not the x-intercept, it is this type of inhibition:
a. Competitive.
b. Non-competitive.
c. Mixed Inhibition (uncompetitive inhibition).
d. You cannot tell from the data given.
e. More than one answer is correct.

A

b

70
Q

Which of the following diseases has not been successfully treated using the principles of enzyme inhibition?
a. AIDS.
b. Lactose intolerance
c. Virus infection
d. Neither AIDS nor virus infection.
e. All of these have been successfully treated using enzyme inhibitors.

A

b

71
Q

Which of the following is true about a mixed type inhibition?
a. A Lineweaver-Burk plot will give parallel lines
b. The KM will change but not the Vmax
c. The lines of a Lineweaver-Burk graph will cross in the top left quadrant
d. None of these is true

A

c

72
Q

Pure noncompetitive inhibition is a limiting case of
a. Competitive inhibition
b. Uncompetitive inhibition
c. Irreversible inhibition
d. Mixed inhibition
e. None of these is true

A

d

73
Q

Which of the following is the most unique about an uncompetitive inhibitor?
a. It affects the KM of the enzyme
b. It affects the Vmax of the enzyme
c. It can be identified by a Lineweaver-Burk plot
d. The inhibitor can bind to ES but not to free E
e. None of these is particularly unique to an uncompetitive inhibitor

A

d

74
Q

Which of the following is not related to the others?
a. Suicide Substrate
b. Irreversible Inhibitor
c. Trojan Horse substrate
d. Competitive Inhibitor
e. All of these are related

A

d

75
Q

Nonenzymatic catalysts enhance the rate of a reaction by factors of _____.
a. 10^5 to 10^9
b. 10^2 to 10^4
c. 10^15 to 10^20
d. 10^22 to 10^24

A

b

76
Q

Identify a true statement about the enzyme creatine kinase (CK).
a. Creatine kinase (CK) is found only in brain and skeletal muscles.
b. After a heart attack, creatine kinase (CK) shows up more rapidly in blood than lactate dehydrogenase (LDH).
c. Creatine kinase (CK) is an isozyme as it can exist in five different forms.
d. A high level of creatine kinase (CK) in brain indicates normal functioning of the brain.

A

b

77
Q

The rate of the reaction of glycogenn with inorganic phosphate, Pi
, to form glucose-1-phosphate and glycogenn-1 is
_____.
a. rate = k[Glycogen]^1[Pi]^1
b. rate = k[Glycogen]^0[Pi]^1
c. rate =
k[Glucose-1-phosphate]^1 [Pi]^1
d. rate =
k[Glucose-1-phosphate]^0[Pi]^1

A

a

78
Q

The rate of a zero-order reaction depends on the _____.
a. total number of reactants
b. concentration of products
c. concentration of reactants
d. presence of catalysts

A

d

79
Q

Explain the mechanism of the lock-and-key model of enzyme-substrate binding

A

The lock-and-key model assumes a high degree of similarity between the shape of the substrate and
the geometry of the binding site on the enzyme. The substrate binds to a site whose shape
complements its own shape, like a key in a lock or the correct piece in a three-dimensional jigsaw
puzzle.