Test 3 Flashcards
Most ancient genus of known bacteria
Aquifex
Most thermophilic of all bacteria
Aquifex
cells are surrounded by protein covering (toga)
Thermotoga
Not a thermophile, but had rRNA sequence that is similar to Aquifer, Thermotoga, and Chloroflexi
Deinococcus species
first isolated by foods sterilized by game radiation
can tolerate up to 5000 g-rays of radiation
stains gram positive due to thick peptidoglycan layer, but has an outer membrane like gram negative
Deinococcus species
large group of oxygenic phototrophs
Cyanobacteria
have thylakoids and carboxysome body and grow as filaments
Cyanobacteria
Fix N2
cyanobacteria, heliobacterium species, Azotobacter vinelandii, Rhizobium species, Prochlorococcus
have gas vesicles for buoyancy and cause nuisance blooms in freshwater
secrete many neurotoxins
cyanobacteria
survival stucture formed by Cyanobacteria
Akinetes
Smallest and most abundant photosynthetic microorganism on earth
Prochlorococcus species
3 divisions of Gram positive bacteria
Firmicutes, mollicutes, and actinobacteria
halotolerant, can be found on the skin and mucous membrane
Staphylococcus species
fermentative bacteria that produce lactic acid
Streptococcus/Lactobacillus species
can grow in very acid environments
Lactobacillus species
4 endospore formers
Clostridium, Bacillus, Sporosarcina, Heliobacterium
Strict anaerobes
Tetanus, botox, gangrene
Clostridium species
forms crystal in caterpillar’s gut (crystalline inclusion)
Bacillus thuringiensis
unique among endospore formers because cells are cocci instead of rods
common in soils
Sporosarcina species
anoxygenic phototrophs; strictly anaerobic
reside in soils and in highly alkaline environments
produce bacteriochlorophyll g
Heliobacterium species
key components of peptidoglycan are missing
Pleomorphic
pathogenic
Tenericutes/Mollicutes
example of mollicutes
Mycoplasma species
“low GC”
Firmicutes
“High GC”
Actinobacteria
produce mycelium analogous to mycelium of fungi
reproductive structures called conidia
primarily in soil microorganisms, responsible for earthy odor soils
Streptomyces species
produce over 500 distinct antibiotics including ahminoglycosides, tetracyclines, daptomycin, platensimycin
Streptomyces species
rod-shaped
acid fast due to mycolic acids
many are slow growers due to waxy/hydrophobic outer later
mycobacterium species
Largest and most metabolic group of bacteria
Proteobacteria
involved in a mutualistic relationship
alpha proteobacteria
fix nitrogen for the plants; plants provide photosynthesis products (can be oxidized to generate energy)
Rhizobium species
deficient in most metabolic functions, must get metabolites from host
Rickettsias species
very diverse in their degradation capacities
Beta proteobacteria
rods and curved rods
most inhibit aquatic environments
vibrio species (vibrio cholerae)
aerobic rod shaped bacteria with polar flagella
Major biofilm former
Pseudomonas species (pseudomonas aeruginosa)
colonize human intestinal tract
possess relatively simple nutritional requirements
Enteric Bacteria
example of mix-acid fermenters
Escherichia coli
example of butanediol fermenter
Enterobacter aerogenes
universal inhabitants of intestinal tract of humans and warm-blooded animals
synthesize vitamins for host
Escherichia coli
food poisoning (pathogenicity island)
Salmonella species
Shingellosis (dysentery)
Shingella species
free-living, aerobic
large, obligately aerobic rods
can form resting structures (cysts)
produce extensive capsules or slime layers
Azotobacter vinelandii
Gliding bacteria, twitching motility
lifestyle includes consumption of dead organic matter or other bacterial cells
Myxococcus species
Parasitic to other bacteria
grows in periplasm of host, feeding on the biopolymers
Bdellovibrio species
Common host and end result of Bdellovibrio species
E. coli
lysis of host cells
smallest group of proteobacteria
abundant in toxic and anoxic interfaces in sulfur-rich environments
Epsilon proteobacteria
cause stomach ulcers
burrows below protective mucous layer
Heliobacter pylori
30% of weight of human fecal material is made of this
Bacteroides species
synthesize sphingolipids
Bacteroides species
contain chlorosomes
filamentous anoxygenic phototrophs
Chloroflexus species
unusual membrane lipids (cell wall is composed of protein and lacks peptidoglycan
Thermomicrobrobium species
green sulfur bacteria
utilize H2S as an electron donor
found at greatest depths of any phototropic organism
Chlorobium species
Coiled shaped bacteria usually found in aquatic environment
motile and possess endoflagella
Spirochetes
anaerobic host-associated spirochetes that are commensal or parasites of humans
Treponema species
causes syphyilis
Treponema pallidum
cause lyme disease
has a linear chromosome
Borrelia burgdorferi
poor metabolic capacity
no peptidoglycan
currently on of the leading sexually transmitted diseases
Chlamydia species
most common sexually transmitted bacteria in the US
Venereal disease
epidemic in birds that can cause blindness in humans
Psiltacosis
leading cause of blindness in humans
Conjuctivitis or trachoma
survives outside of host
similar in function to endospore
small elementary bodies
grows within cells
does not survive outside host
large reticulate body
primary aquatic bacteria that reproduce by budding
possess protein stalks for attachment
S layer protein cell wall
Planctomycetes
wrinkled microbes
form cytoplasmic extensions called protheca
contain tubulin
Verrucomicrobia
require at least 9% NaCl for growth
Extreme Halophiles
prevent water loss in hypertonic environment
Halobacterium salinarium
very diverse habitats : from marshes to landfills to termite gut
Very diverse cell wall: from pseudomurein to protein/glycoprotein to glycoproteins to S-layer
Methanogens
lack cell walls (2)
Thermoplasmatales, Crenarchaeota, Mycoplasma species
most strains have been isolated from self-heating coal refuse piles
Thermoplasmatales
Unique cytoplasmic membrane structure to tolerate high temperatures and low pH levels
membrane contains lipoglycan consisting of tetra ether lipid monolayer with mannose and glucose
Thermoplasma species
Membrane contains glycoproteins but not sterols
Thermoplasma species
Grow optimally at 100 degrees C
highly motile
Hyperthermophiles
Example of Hyperthermophile
Pyrococcus species : “fireball”
irregular in shape
no cell wall
unique lipid: crenarchaeol
use sulfur containing compounds as electron acceptor
Crenarchaeota
one of the smallest cellular organisms
Nanoarchaeota
found in Obsidian Pool at Yellowstone
No pure cultures exist
Korarchaeota
Grows chemolithrophically by aerobically oxidizing ammonia
capable of using CO2 as a carbon source
Thaumarchaeota
Which domain has the greatest diversity of size?
Eukaryotes
what are fungi cell walls made of
chitin
non-motile, most grow hyphae
Fungi
unicellular fungi
reproduce via budding
Yeast
One of the most beneficial yeasts (associated with winemaking, making and brewing)
Saccharomyces cervisiae
common in habitats where sugars are present
Saccharomyces cervisiae
form motile reproductive zoospores, symbiont in bovine rumen
Chytrids
frog pathogen
Chytrids
non-motile sporangiospores (gametes)
fuse to form zygospore
Zygomycetes
Zygomycete primarily known for food spoilage
Rhizopus species
Produce spores called basidiospore
basidiomycetes
true mushrooms
basidiomycetes
Three groups of algae
Phytoplankton, Chlorophyta, Rhodophyta
Four groups of Fungi
yeast, chytrids, zygomycetes, basidiomycetes
paired flagella
stores energy as starch
Phytoplankton
Green algae (chlorophyll a)
Chlorophyta
red algae (phycoerythrin)
Rhodophyta
grow near top of the water
multiple life forms
Green Algae
allows growth in deeper waters
sulfated sugar polymers: agar (agarose)
Phycoerythrin
amorphous shape, move and absorb food using pseudopods
Ameobozoa
parasites of verebrates and invertebrates
Entamoeba species
Protist that causes severe stomach illness
Entamoeba histolytica
Brain eating bacteria, enters through the nose, forms cyst
Naegleria fowleri
aggregate to form fruiting body
slime molds
shelled ameobas
cercozoa
needle-like pseudopods, shells have holes for pseudopods to project from and are made of silica
Radiolarians
shells made of calcium carbonate
indicators of petroleum deposits
Foraminiferans
may function to help maintain osmotic balance
Alveoli
have extrusomes, microtubules, and multiple cilia or flagella
Alveoli
contractile vacuole to maintain osmotic balance
possess two nuclei
Ciliates
two long flagella carotenoids extrusomes endosymbionts biolumenescent
Dingoflagellates
Red tide
Dingoflagellates
when endosymbionts leave the coral
coral bleaching
large group of parasitic protists
NO CILIA
Apicomplexans
cause malaria, most important parasitic disease world wide, infects liver and red blood cells
Plasmodium species (P. falciparum)
possess kinetoplast: a mass of DNA present in their single, large mitochondria
Trypanosomes species
carried by tsete fly, causes African sleeping sickness
Trypanosoma brucei
carried by “kissing” bug, causes Chaga’s Disease (enlargement of the heart)
Trypanosoma cruzi
have two nuclei
lack mitochondria, possess mitosome
Giardia species
causes gastroenteristis (2)
Giardia lamblia, Vibrio cholerae
Lack mitochondria but have hydrogenosomes
Genomes lack introns
Trichomonas species
4 Groups of Euryarchaeota
Extreme halophiles, Methanogens, Thermoplasmatales, and Hyperthermophiles
located in hydrothermal vents and hot springs
Nanoarchaeota
species responsible for bread mold
Rhizopus species
unicellular form of chlorophyta that have flagella
Chlamydomonas species