step 1 study deck 3 Flashcards
where is heme made
in both the cytosol and the mitochondria of RBCs
maturing RBCs lose their ability to synthesize heme when they lose their mitochondria (needed for the first step and the last 3 steps)
heme is synthesized in virtually every organ but the main ones are RBC precursors in the bone marrow and hepatocytes using the CYP450 system
how can atrophic gastritis cause anemia (loss of gastric cells, replaced by fibrosis)
causes profound hyper- HCl secretion
inadequate IF production
vit B12 def
elevated methylmalonic acid levels (B12)
causes pernicuous anemia
reticulocyte count increases dramatically once B12 treatment is initiated but hemoglobin and RBC count take up to 8 weeks to normalize
what is the most common brain tumor in children
pilocytic astrocytoma
arise in the cerebellum
unlike medulloblastoma (the most common MALIGNANT childhood brain tumor which is solid only and causes hydrocephalus), pilocytic astrocytoma has both cystic and solid components on imaging
what are the histology features of: ependymoma GBM medulloblastoma oligodendroglioma pilocytic astrocytoma
ependymoma= perivasc psuedorosettes
GBM= pseudopalisading pleomorphic cells with areas of necrosis… GFAP positive
medulloblastoma= homer wright rosettes (cells around a neuropil)
oligodendroglioma= calcified “fried egg” appearance surrounded by a “chicken wire” pattern
pilocytic astrocytoma= GFAP positive hairlike processes with rosenthal fibers (eosinophilic intracytoplasmic inclusions)
describe alternative splicing
single gene can code for various proteins by including or excluding exons to make mRNA
this is used by cancer cells to spice out an exon that codes for a transmembrane domain (like Fas- R) converting the protein to a soluble form not expressed on the cell surface and thus allows cells to evade apoptosis
describe the blood flow through lung zones 1, 2, and 3
1= doesnt really exist but theoretically there is no blood flow because the high alveolar pressure collapses capillaries… this is the alveolar dead space… but can occur when there is low arterial pressure like in hemorrhage or high alveolar pressure like in positive pressure ventilation
2= pulsatile because venous pressure rises above alveolar pressure during systole which allows to blood to move through
3=continuous blood flow (when a patient is lying supine then technically the whole lung is type 3!)
both V and Q increase from apex to base but perfusion (Q) does so to a greater degree and thus the V/Q ration decreases from apex to base
what is impaired that causes megaloblastic anemia
the underlying biochemical feature of megaloblastic anemia is defective DNA synthesis
(“diminished THYMIDINE synthesis”)
in this patient he has anemia (MCV>100), epigastric pain, fatigue, and pancreatic calcifications (we are assuming this is chronic pancreatitis caused by alcohol abuse even though alcohol was not mentioned which causes folic acid def [months] and B12 def [years])
folic acid is needed as a single carbon donor to make purines and pyrimidines and put them in DNA… pancreatic insuff can also lead to B12 def because the pancreatic enzymes are needed to cleave R factor from B12 so it can bind IF and be absorbed
where do you see impaired pyruvate decarboxylation
pyruvate dehydrogenase (oxidatively) decarboxylates pyruvate into acetyl coA which then goes into the citric acid cycle
the pyruvate dehydrogenase complex requires thiamine pyrophosphate (TTP) to work
(thiamine=B1)
alcoholics suffer from B1 def and thus impaired pyruvate decarboxylation
where do you see intracellular transamination reactions
the first step of AA breakdown is transaminases or aminotransferases
they both require the coenzyme form of vit B6 (pyridoxine) because it is the carrier of the amino group
B6 def causes a hypochromic, microcytic, and sideroblastic anemia
result= you will see low rate of intracellular transamination reactions
what is the difference between a localized carcinoid tumor and a metastatic carcinoid tumor
local= would not cause the symptoms seen in carcinoid syndrome because the localized tumor would be behind the liver and the liver has MAO which breaks down the serotonin released by the tumor before getting into systemic circulation (aka its metabolized by first pass metabolism)… the lungs also have MAO and thats why carcinoid problems dont affect the left heart
metastatic= extra-intestinal metastasis are required to produce symptoms
symptoms: flushing, diarrhea, bronchospasm
dx: elevated urine 5HIAA
tx: octreotide for symptomatic patients and surgery for liver mets
carcinoid tumors come from enterochromaffin (endocrine) cells in the small intestine, they produce SEROTONIN, bradykinin, and prostaglandins,…
an enveloped RNA virus from animals can now infect humans, which virally encoded protein mutated?
surface glycoprotein
who a virus can infect is based on viral surface proteins and if they can mind host plasma receptors
a mutation in the viral encoded envelope glycoprotein can dramatically affect the range of host cells the virus can attach to or infect
ex= hemagluttanin mut in influenza A that confers a new binding affinity for the neuraminic acid containing glycoprotein on the surface of human nose epithelial cells and can now infect humans
give a couple examples of DNA methylation and diseases
DNA methylation changes gene expression without altering genetic code
methylation of:
cytosine guanine dinucleotide repeats (CpGs) in the promotor regions = silencing of those genes by not transcribing them
Fragile X= X linked dominant disorder of increased CGG trinucleotide repeats on the fragile X mental retardation 1 gene (FMR1) leading to hypermethylation of cytosine residues and FMR1 inactivation
(CGG= Congenital Giant Gonads… also large jaw and large ears)
Cytosine methylation is also used in genetic imprinting
(PWS and Angelmans)
methylation= silencing
what is epistasis and pleiotropy
epistasis= the allele of one gene affects the phenotypic expression of alleles in another gene
pleiotropy= single gene influences multiple phenotypic traits
what are the pulm function test results for COPD
TLC increased
(vvv)FEV1/(v)FVC is decreased
FVC decreased
RV is increased
in COPD you would also expect to see increased erythropoietin production (EPO) due to hypoxia that stimulates the cortical cells of the kidney
what does this patient have?
1 yo African American boy
severe swelling and tenderness to hands and feet (very painful)
older brother died of pneumococcal sepsis at age 6yo
he has sickle cell disease (SCD)
AR
you know this because:
1. hemolysis (intravasc and extravasc)- you will detect increased indirect unconj bilirubin, lactate, and decreased haptoglobin (binds free hgb)
- vasoocclusion (patient’s dactylitis- hand foot syndrome- which results from small infarctions in the bones of the extremities) this is common in SCD patients in the first few years of life since the affected bones still contain hematopoietic bone marrlow
pain crises/acute chest/leg
ulceration/priaprism(painful erections)/autosplenectomy/and stroke occurs in older kids and adults
- infections (infections with encapsulated organisms, aka strep pneumo, which killed his brother because of his brother’s functional asplenia)
what causes hereditary angioedema
rare AD disorder
causes painless swelling to the lips, face, larynx, and extremities
caused by a C1 inhibitor def
what causes a left or right shift in the oxygen hemoglobin dissociation curve
left= (increased affinity to oxygen and thus less oxygen being unloaded to tissues)
decreased H+ (aka increased pH)
decreased 2,3 BPG
decreased temp (hypothermia)
right=
increased H+ (aka decreased pH)
increased 2,3 BPG
increased temp
what is familial erythrocytosis
high RBC mass
due to mutation in the beta globin
causes reduced binding of 2,3 BPG (similar to how fetal hemoglobin doesnt bind 2,3BPG well because of its serine residue instead of histadine)
2,3 BPG normally forms ionic bonds with the beta subunits of deoxygenated Hgb A facilitating oxygen release to tissues
mutations that lose this binding pocket’s positive charge causes Hgb A to look like HgF which binds oxygen with a higher affinity because it cant interact with 2,3 BPG
what are beta globin tetramers and gamma globin tetramers called
beta tetramer= Hgb H
gamma tetramers= Barts
these are alpha thalassemia findings and have extremely high oxygen affinity (resembling myoglobin) and are ineffective at delivering oxygen to tissues
what is the differences between prokaryotic and eukaryotic DNA replication
prok=
3 major DNA pol (1,2,3)
circular DNA
single origin of replication
euk=
5 major DNA pol (alpha, beta, gamma, delta, epsilon)
larger more complex genome
introns and extrons
linear DNA
multiple origins of replication (allows for quick replication)
why do you give vit A to kids with measles
measles= fever, cough, congestion, conjunctivitis, and maculopapular rash "koplik spots" (face/hairline --> neck/trunk-->extremities) highly contagious paramyxovirus spread via resp droplets or contact vaccine preventable (*child in question was unvaccinated)
supplement with vit A (esp if def) because measles depletes the vit A stores [and can cause keratitis (corneal inflamm) and corneal ulceration] and vit A supplement can help prevent these complications
vit A also decreases risk of other comorbidities (like pnu, encephalitis), recovery time, and length of hospital stay
what are caused by def in:
vit B6 (pyridoxine) vit B12 (cobalamin) vit D vit E vit K
vit B6 def= oral findings (stomatitis-oral ulcers, cheilosis-cracks at the corners of the mouth)… B6 can be given theraputically to decrease ADRs of isoniazid and to decrease homocysteine levels)
B12 def= macrocytic anemia, hypersegmented neutrophils, neurologic signs (paresthesias)… found only in animal products, vegans are at risk
D def= bone problems (rickets-bone softening, osteomalacia-bone softening)
E def= hemolytic anemia and neurologic abnormalities (ataxia)
K def= easy bleeding
what do these surface markers correlate to? CD4 CD7 CD8 CD14 CD20
CD4= T helper cells
CD7= (multi chain complex) T cell marker
CD8= cytotoxic T cells
CD14= monocyte macrophage cell
CD20= B cell marker…. monoclonal ab’s against CD-20 (aka rituximag) have been successful in treating lymphomas
Describe SCID
defective T cells (development ) and B cells (dysfunction)
x linked or AR
infections with viruses, fungi, and opportunistic infections (PJ pnu) = T cell loss
sinopulmonary and bacterial infections like pnu and otitis media = B cell dysf due to no Th cells
SCID babies get infections, chronic diarrhea, and failure to thrive
its on the newborn screen
labs= low lymphocytes, low immunoglobulins
tx= stem cell transplant
differential dx= HIV infection