Skildum- HIV Flashcards
HIV classification:
genome
capsid
envelope
two copies of + ssRNA
icosahedral
Yes, gp120, gp41
What is the tropism for HIV?
CD4 T cells (also CD4 monocytes and macrophages)
What are the three enzymes that the virus particle contains?
Reverse transcriptase
Integrase
Protease
What are the main genes in the HIV genome?
gag
pol
env
LTR
What does gag encode for?
capsid proteins
p24
What does pol encode for?
RT
protease
integrase
What does env encode for?
envelope glycoproteins
gp120
gp41
What are LTRs?
integration sites
bind to host TFs (NFkB, Sp-1, TBP)
Integrase recognizes thses sites and cuts host genome here to insert viral genome
strong promoters act as NfkB regulated promoters
Here’s a doosey.
describe the infection cycle
- Protein at surface of viral particle interacts w/ protein of host cell
Gp120:CD4
Gp41:CCR5/CXCR4
CSCR4: SDF-1 - virus enters cell and uncoats
- Genomic RNA is dumped into cytoplasm w/ RT, integrase and protease
- RT copies genome into dsDNA
- I ntegrase inserts dsDNA into host genome (provirus)
- Once inserted you get expression of viral genes (turns on trxn and trln material to make viral particle and trxn of viral genome)
- Unprocessed genomic RNA is released
- Virus buds out through pm to infect other cells
What is the difference between spliced and unspliced RNA?
Early in infection–spliced
Splicing of genome> rev, nef, tat> machinery to make viruses (doesn’t end up in particle)
Later in infection- unspliced
Unspliced RNA is translated to make:
1. structural and enzymatic proteins of viral particle
2. viral genome
What is the normal function of CD4 T cells in cellular immunity?
IL-2 response: Th1, activates CTLs (CD8+ T cells)
Fights off opportunistic infections
IL-4,5,6 response: Th2, activates B cells to become plasma cells
Parasitic infection
What is the consequence of losing CD4 T cells?
You can’t fight off infections
What are common opportunistic infections?
Viral:
Kaposi sarcoma virus (KSV, HHV-8)- almost exclusively found in immunocompromised
Cytomegalovirus (CMV, HHV-4)- Mono in person w/ normal immune system, in pt w/ advanced ageà systemic infection
Fungal:
Candida- yeast infection
Protozoa:
Cryptococcus
Pneumocystis
How do you diagnose HIV?
ELISA confirmed by western blot
How do you monitor pts w/ HIV?
CD4 T cell enumeration by flow cytometry
PCR: viral RNA orDNA