Second Messengers and Intracellular Signal Transduction Pathways Flashcards

1
Q

How is the presence of a ligand sensed by a cell

A

When a receptor is bound it activates a pathway

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2
Q

How is information transmitted further into the cell from the receptor

A

Through a signal transduction pathway:
conformational changes
protein-protein interactions
generation of second messengers
post-translational modifications

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3
Q

What do G-protein conformational changes activate

A

Heterotrimeric G-protein subunits activate

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4
Q

Which G-protein subunit dissociates when bound by GTP

A

Alpha

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5
Q

What causes the alpha subunit to return to the receptor

A

GTP hydrolysis to GDP

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6
Q

What type of receptor dimerizes when bound by a receptor

A

Enzyme-coupled

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7
Q

What phosphorylates CDKs

A

CDK activating kinases (CAKs)

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8
Q

What happens to CDKs when phosphorylated

A

A conformational change allows full activation of the CDK allowing a closer fit with cyclin

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9
Q

Which kinase has inhibiting phosphorylation that stops CDKs

A

Wee-1

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10
Q

What is a signal cascade

A

Each event directly leads to the activation of the next downstream event. Linear/hierarchal

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11
Q

Protein kinase A is complex of what

A

regulatory proteins and catalytic subunits

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12
Q

What activates PKA

A

cAMP binding to R subunits

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13
Q

What does PKA regulate and what does each target cause

A

Ca2+ handling proteins - muscle contraction/ relaxation
Metabolic enzymes - release of glucose
transcription factors - transcription (CREB)

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14
Q

What activates CREB and where does CREB bind

A

PKA
CREB regulatory elements in target genes

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15
Q

What does the phosphorylation of CREB allow

A

Binding of CREB binding protein (CBP) which can then promote transcription

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16
Q

How does IP3 enter the cell and where does it bind

A

Passive diffusion
smooth ER Ca2+ channel receptors

17
Q

What happens when IP3 binds its intracellular target

A

activation of calcium-regulated signalling proteins including membrane calcium channels
h=greater increase of Ca2+ levels

18
Q

Explain the MAPK pathway

A

GTP-bound Ras binds MAP kinase kinase kinase (Raf)
Which phosphorylates MAP kinase kinase (MEK)
Which phosphorylates MAP kinases (Erk1 and Erk2)
Activated MAPKs enter the nucleus and activate transcription factors

19
Q

How are signalling cascades organised in 3D space

A

scaffolding proteins enhance specificity and proximity of proteins

20
Q

Why do signals need to be amplified

A

random fluctuations (noise) are filtered out
minimise cell function occurring by chance

21
Q

How do you amplify or limit the activity of a signalling pathway

A

changing ligand concentration
changing receptor concentration
using signal amplification eg enzyme cascades

22
Q

Explain a positive feedback loop

A

when a molecule has a stimulating effect on a molecule upstream of it

23
Q

Explain a negative feedback loop

A

when a molecule has an inhibitory effect on a molecule upstream of it