Sara - MHC Binding, Polymorphism and Processing Flashcards
How many different Class I molecules can an individual express?
Up to 6 different types
How many different Class II molecules can an individual express?
12
Describe the peptide binding to MHC
(4)
It is not highly specific
Unlike antibodies or T cell receptors
The MHC must be able to present a huge array of antigens to T cells
MHC undergoes promiscuous binding
What is meant by promiscuous binding
The ability of MHC to bind multiple different antigens and present them to T cells
What is the ideal length of a peptide for Class I?
9 amino acids long (between 8 and 10)
What happens if a longer peptide binds to the groove of MHC Class I?
It can be cleaved in the endoplasmic reticulum by exopeptidases
Give an example of an exopeptidase
ERAp
Give an example of an exopeptidase
ERAP
What does the MHC peptide require during peptide binding?
The peptide must contain specific amino acid residues:
- at the amino and carboxy termini
- at positions 2 and or 3 and 9
What does histocompatibility determine?
Determines whether cells in a tissue are seen as self or not
What is the region that codes for MHC in mice called?
The H2 region
What does MHC class III do?
(2)
Produces TNFa
Produces heat shock proteins
How many Class I molecules can be produced from a chromosome 6?
Three class I molecules
What must be done to antigens in order for MHC to use them?
The antigens must be processed into peptides -> between 8 and 10 amino acids long for Class I
What type of peptide fragments are generally used for Class I?
Endogenous peptide fragments