Sanjna - BIO - Flashcards

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1
Q

One cancer cell line doesn’t mean all cell lines; be careful with extreme questions and answer choices

A

One cancer cell line doesn’t mean all cell lines; be careful with extreme questions and answer choices

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2
Q

What are the steps of oncogenesis?

A

Metastasis happens after cancer so it can’t be prevented after cancer starts; cancer causing mutations can be repaired before being passed on

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3
Q

Explain eukaryotic and prokaryotic transcription and translation?

A

In eukaryotes, each gene has their own transcription start site; don’t confuse transcription and translation

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4
Q

What is RNA polymerization?

A

hybridization is the opposite of denaturation and it can have gene silencing effects when a small RNA binds to mRNA and prevents translation

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5
Q

astericks and horizontal lines above data points signify statistical significance

A

astericks and horizontal lines above data points signify statistical significance

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6
Q

What would lead to an anionic protein?

A

A protein can contain many fewer basic residues than uncharged and still be catatonic (bc uncharged doesn’t contribute anything); you need to consider the amount of acidic residues to basic residues

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7
Q

What category does eosinophil fall under?

A

Eosinophil has DNA and membrane bound nucleus but erythrocyte does not

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8
Q

What is the differenc bw downregulates and upregulates and what does internalization of a protein mean? What activates PKA?

A

pick the answer choice that is all correct over one that “sounds”correct.

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9
Q

What are two disinfecting agents?

A

autoclave (extreme heat and pressure) is best way to sterilize

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10
Q

What are the differences between meiosis and mitosis?

A

mitosis = growing cell cultues = cyclical = results in diploid ; meiosis = transmission to offspring = non cyclical = results in haploid

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11
Q

Draw out single and double cross over

A

double crossoveers can affect segments in the middle of chromosome arms; single crossovers only affect the ends

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12
Q

What are the differences and similarities bw these three types of muscle

A

Troponin is required for muscle contraction in skeletal and cardiac muscle but not smooth muscle

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13
Q

when analyzing data, look for simple things that are right; don’t get confused by confounding variables; if the number is higher than baseline even by a little it is considered elevated

A

when analyzing data, look for simple things that are right; don’t get confused by confounding variables; if the number is higher than baseline even by a little it is considered elevated

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14
Q

What dissossociates peptide bonds?

A

peptide bonds = stable, normally found in trans, partial doube bond character and resonance stablization

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15
Q

When they tell you that FAD2+ and NAD + have been reduced, it means the fatty acid has been oxidized; and vice versa

A

When they tell you that FAD2+ and NAD + have been reduced, it means the fatty acid has been oxidized; and vice versa

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16
Q

if fatty acid catabolism doesn’t occur = great abundance of fatty acids in body and less energy availible = glucose more heavily relied upon = decrease glucose levels ; hyperglycemia is increase in glucose levels

A

if fatty acid catabolism doesn’t occur = great abundance of fatty acids in body and less energy availible = glucose more heavily relied upon = decrease glucose levels ; hyperglycemia is increase in glucose levels

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17
Q

G pairs with C (3 H bonds), A pairs with T in DNA and with U in RNA (2 H bonds); G and A are purines, C,T and U are pyramidines, In double stranded DNA percentage of C equals percentage of C and percentage of A equals percentage of T, this doesn’t have to be the case in ssDNA.

A

G pairs with C (3 H bonds), A pairs with T in DNA and with U in RNA (2 H bonds); G and A are purines, C,T and U are pyramidines, In double stranded DNA percentage of C equals percentage of C and percentage of A equals percentage of T, this doesn’t have to be the case in ssDNA.

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18
Q

Glycolysis = glucose

A

Glycolysis = glucose

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19
Q

aromatic structure doesn’t imply an obstacle, but the aromatic rings being non polar implies an obstacle of flowing thru solvents such as blood and cytosol bc made of water

A

aromatic structure doesn’t imply an obstacle, but the aromatic rings being non polar implies an obstacle of flowing thru solvents such as blood and cytosol bc made of water

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20
Q

on a graph, all of the data points should support the answer choice for it to be right; don’t jump to conslusions

A

on a graph, all of the data points should support the answer choice for it to be right; don’t jump to conslusions

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21
Q

what is difference between prokarotes and eukaryotes

A

bacteria = ecoli and archaea = prokaryotes

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22
Q

What is henderson hassalbach equation

A

Plasma precipitating out is very dangerous; amino acid residue side chains can act as buffers and maintain PH levels

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23
Q

give an example of each

A

homologous = different functions now but from same evolutionary history ; analogous = evolved independtly but same function

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24
Q

What kind of pressure drives inhalation?

A

lungs cannot sponteously collapse ; residual volume is that the lungs are at minimum volume under maximum intrapleural pressure

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25
Q

What stage does nondisjunction occur in?

A

if you gain a chromomome it becomes 47 but if two fuse together you lose a chromosome

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26
Q

What direction are aa’s synthesized in?

A

Earlier amino acids will be closest to N terminus than C terminus

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27
Q

psysiological pH both neg and positive charges will exist on COO- and NH3 + with neutral charge of 0; at high pH, both deprot, at low pH both prot

A

psysiological pH both neg and positive charges will exist on COO- and NH3 + with neutral charge of 0; at high pH, both deprot, at low pH both prot

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28
Q

eicosanoids - derived from arachidonic acid: prostaglandins, thromboxanes, leukotrienes type of phospholipids

A

eicosanoids - derived from arachidonic acid: prostaglandins, thromboxanes, leukotrienes type of phospholipids

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29
Q

don’t pick the more extreme choice unless there is ample evidence

A

don’t pick the more extreme choice unless there is ample evidence

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30
Q

What is noncompetitive inhibiton? What is uncompetitive inhibiton?

A

irreversible inhibitor = chemically alters enzyme; competitive inhibitor = preferentiaal compared to actual enzyme

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31
Q

hydronium ion and hydroxide ion neutralize each other

A

hydronium ion and hydroxide ion neutralize each other

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32
Q

What is the period cycle?

A

reproduction probably upregulated in younger species

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33
Q

What is an integrin protein? What is occludin?

A

cytoskeleton of one to the cytoskeleton of another connects gap junctions

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34
Q

What does the heaviest aa weigh?

A

amino acids weight less than nucleotides or other molecules; trypotphan is heaviest aa weighs 204 Da.

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35
Q

Where are gap junctions found?

A

gap junctions = speed = reflex neurons

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36
Q

Where do neurotransmitters bind?

A

chemical synapses have a longer time that the neurotransmitter has to move between intracellular space = slower

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37
Q

What does siRNA do?

A

siRNA inteferes during post transcriptional control and prevents mRNA from being translated

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38
Q

What results in ketone bodies in urine?

A

proteins in urine are a result of damage to glomerulus, not hyperglycemia whitch results in ketone bodies and glucose in urine

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39
Q

What is western blot measure? Southern blot? Northern blot?

A

RT-PCR= amount of RNA expressed; western blot = amount of protein expressed; northern blot = identify RNA sequences; southern blot = identify specific DNA sequences

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40
Q

What are the purines?

A

adenosine = nucleoside = nitrogenous base and five carbon sugar

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41
Q

What type of molecule is co2?

A

hormones are large, CO2 is small and non polar

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42
Q

non polar = lipid soluble; lysing something destroys its structure and therefore its effects

A

non polar = lipid soluble; lysing something destroys its structure and therefore its effects

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43
Q

look for connections and look at all the figures/passage when lost

A

look for connections and look at all the figures/passage when lost

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44
Q

What complex is NADH dehydrogenase?

A

cytochrome c = highly soluble unlike other cytochromes

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45
Q

What are characteristics of hyperventilation?

A

hypoxia = oxygen deprivation; hyperventilation = too much o2 and too less co2 = too less co2 = increase in ph and increase in hb affinity for 02

46
Q

What kind of aa is arginine?

A

read carefully, arg168 is diff than other arg’s

47
Q

What does a higher KM mean for affinity?

A

km can’t be changed by changes in substrate or enzyme concentrations

48
Q

pay attention to which amino acid or tricky thing the question is asking for;

A

pay attention to which amino acid or tricky thing the question is asking for;

49
Q

What is fungi? (prokaryote or eukaryote?)

A

viruses are often described as non living ; fungi viruses and bacteria can replicate inside a host

50
Q

Disregulation in what process causes cancer?

A

disregulation in mitosis = over cell growth; disregulation in apoptosis = too much cell death

51
Q

need to practice synthesizing info from passage with question and graph and be more careful in what the question is asking

A

need to practice synthesizing info from passage with question and graph and be more careful in what the question is asking

52
Q

Where will membrane bound enzymes attach to in mitochondria?

A

innermembrane space not where membrane bound enzymes will attach

53
Q

be more careful and dont rush if you dont need to

A

be more careful and dont rush if you dont need to

54
Q

Why is ribose heavier than deoxyribose?

A

ribose heavier than deoxyribose because deoxy lacks a 2 prime oh group present on ribose

55
Q

READ CAREFULLY

A

READ CAREFULLY

56
Q

Do SN1 or SN2 reactions use polar protic solvents?

A

SN2 = polar aprotic solvents (ex. acetone); SN1 = polar protic solvents (O-H or N-H bonds) that can stabilize carbocation

57
Q

What travels farther in SDS page?

A

SDS page: smaller moleculs travel farther, large bands are probably more inact

58
Q

What is the anitsense strand? What is the template strand?

A

coding strand = DNA

59
Q

What is transformation vs transduction vs conjugation?

A

DNA and proteins are different

60
Q

What is angiogenesis?

A

angiogenesis = formation of new blood vessels; when it is pathalogical it can have a role in cancer

61
Q

What kind of hormone is insulin and what is it secreted by?

A

insulin does not act directly on glucose, it acts to reduce blood glucose levels by promoting uptake of glucose into cells; insulin receptors activate glucose transporters

62
Q

does expanding study design make it a better experiment?

A

p value above .05 means not statistically significant

63
Q

What are the negatively and positively charged amino acids?

A

if residue binds to a positively charged domain it needs to have neg charged amino acids; asp = aspartic acid

64
Q

What is an antibiotic?

A

a mutation usually means all cell lines are affected

65
Q

What does human cells being diploid mean for removing function of tumor suppressor gene vs in oncogenes?

A

Human cells are diploid, and therefore to remove the function of a tumor suppressor protein such as p53 both copies of the allele would have to be mutated. (This is in contrast to mutations in oncogenes, where a single gain of function mutation can lead to an overactive protein product). Despite having one mutated copy of p53, therefore, CRC200 would still be expressing WT p53 proteins and as a result transfection with an additional copy of WT p53 would not significantly alter cell growth. Of the options, only D fits this description.

66
Q

What is transduction?

A

genes are highly conserved across species

67
Q

What would cause an acid to disassociate more?

A

increasing pka decreases strength of an acid which causes it to disassociate less; removing H plus will cause acid to disassoicate more

68
Q

What is keto enol tautomerization?

A

for keto enol taut, you need hydrogrens on the alpha carbon availible

69
Q

If more metabolism is needed does that mean it is more vascularized?

A

vasculairzation has to do with enzyme acitivity and metabolism

70
Q

What constitutes a more acidic proton?

A

-

71
Q

What does adaptive immune system do?

A

when a foreign antigen enters human body, adaptive immune system will work to create antibodies against it- so an antibody that works for an animal might not work for a human

72
Q

What are x linked recessive disorders?

A

x linked disorders: a mother with disease will always pass to her son; a father without disease will not pass to her daughter

73
Q

Where does transcription/translation occur in prokaryotes vs eukaryotes

A

bacteria lack method for splicing and mRNA processing

74
Q

What are the different complexes and how do they transfer electrons in oxidative phosphorylation?

A

cytochrome c (complex 3) can only carry one electron at a time

75
Q

what are distinct features on the amino acids?

A

threonine and serine have polar -oh groups; glutamine and asparagine and tryptophan have nh2 polar groups; tryptophan, phenylalanine and tyrosine have aromatic ring

76
Q

What is insulin and how is it produced?

A

insulin = proinsulin; more insulin is more glucose uptake

77
Q

What is BAT?

A

BAT = specilaized adipose tissue that has a lot of mitochondria generated during thermoregualtion

78
Q

What causes entropic pentalty and how do you decrease it?

A

entropic pentalty = not energetically favorable

79
Q

What constitutes a more acidic proton?

A

80
Q

What does adaptive immune system do?

A

when a foreign antigen enters human body, adaptive immune system will work to create antibodies against it- so an antibody that works for an animal might not work for a human

81
Q

What are x linked recessive disorders?

A

x linked disorders: a mother with disease will always pass to her son; a father without disease will not pass to her daughter

82
Q

Where does transcription/translation occur in prokaryotes vs eukaryotes

A

bacteria lack method for splicing and mRNA processing

83
Q

What are the different complexes and how do they transfer electrons in oxidative phosphorylation?

A

cytochrome c (complex 3) can only carry one electron at a time

84
Q

what are distinct features on the amino acids?

A

threonine and serine have polar -oh groups; glutamine and asparagine and tryptophan have nh2 polar groups; tryptophan, phenylalanine and tyrosine have aromatic ring

85
Q

what is insulin?

A

insulin = proinsulin; more insulin is more glucose uptake

86
Q

What is BAT?

A

BAT = specilaized adipose tissue that has a lot of mitochondria generated during thermoregualtion

87
Q

What causes entropic pentalty and how do you decrease it?

A

entropic pentalty = not energetically favorable

88
Q

What constitutes a more acidic proton?

A

-

89
Q

What does adaptive immune system do?

A

when a foreign antigen enters human body, adaptive immune system will work to create antibodies against it- so an antibody that works for an animal might not work for a human

90
Q

What are x linked recessive disorders?

A

x linked disorders: a mother with disease will always pass to her son; a father without disease will not pass to her daughter

91
Q

Where does transcription/translation occur in prokaryotes vs eukaryotes

A

bacteria lack method for splicing and mRNA processing

92
Q

What are the different complexes and how do they transfer electrons in oxidative phosphorylation?

A

cytochrome c (complex 3) can only carry one electron at a time

93
Q

what are distinct features on the amino acids?

A

threonine and serine have polar -oh groups; glutamine and asparagine and tryptophan have nh2 polar groups; tryptophan, phenylalanine and tyrosine have aromatic ring

94
Q

What is insulin and how is it produced?

A

insulin = proinsulin; more insulin is more glucose uptake

95
Q

What is BAT?

A

BAT = specilaized adipose tissue that has a lot of mitochondria generated during thermoregualtion

96
Q

What causes entropic pentalty and how do you decrease it?

A

entropic pentalty = not energetically favorable

97
Q

What is a signal sequence?

A

signal sequence = used for transmembrane proteins; transmembrane proteins will prob not use nuclear localization signals

98
Q

What is the difference between catalyst and cofactor?

A

enzymes are catalysts; cofactors are attached to proteins (Ex. metal ions) ; apoenzyme is an inactive enzyme, activation of the enzyme occurs upon binding of an organic or inorganic cofactor. Holoenzyme- An apoenzyme together with its cofactor. A holoenzyme is complete and catalytically active.

99
Q

Why won’t drowsiness be felt initially by the alchoholic?

A

inducible

100
Q

What is a nucleotide bond between?

A

nucleotide bond is between phosphate and sugar

101
Q

What happens when a structure is not functioning properly in terms of hormone regulation?

A

when something is destroyed (ex. adrenal cortex) the hromone will be secreted more in an attempt to stimulate it

102
Q

What are consequences of diabetes?

A

diabetes can result in weight loss

103
Q

what is semiconservative replication?

A

semiconservative replication: after one round - mix of light and heavy and one light; after second round- only light

104
Q

What is the difference between purine and pyrimidine?

A

purine = G and A; two fused rings; pyrimidine = C and T; 1 ring

105
Q

How much ATP does glycolysis produce and where does it occur?

A

when something affects the ETC thorugh disruptiing the mitochondria, citric acid cycle is also probably disturbed. Glycolysis produces 2 ATP

106
Q

what is ubiquination?

A

ubiquination = targets a protein by degradation by a proteosome

107
Q

Where does vasopressin work?

A

vasopressin inserts aquaporinsn into collecting duct

108
Q

Where does blood from small intestine go first?

A

blood from small intestine is transported first to the liver

109
Q

amplification calculation: divide the new by the old

A

amplification calculation: divide the new by the old

110
Q

How does estrogen affect LH levels normally?

A

an increase in FSH causes increase in estrogen (neg feedback) which causes LH levels to rise and progrestoreone to increase (neg feedback)

111
Q

What do proteases do?

A

proteases function to degreade proteins into smaller fragments (break peptide bonds)

112
Q

How do lysosomes work?

A

lysosomes function at low pH; they are membrane bound organelles that contain enzymes