RNA virus - part 1 Flashcards
Sedoreoviridae
Classification
RNA viruses with genome of dsRNA
* Non-enveloped RNA virus
* Icosahedral symmetry
* Double stranded, linear, 10-12 segmented
* No. capsomers: 92
* Diameter: 60-80nm
Family Sedoreoviridae
genus/types species
- Seadornavirus: Bannavirus
- Rotavirus: Rotavirus A, B, C, D, F, G, H, I, J - most important causal agent of diarrhoea in different animals an man (bovine, porcine, simian, avian…, human rotavirus
-
Orbivirus:
-Arthropod vector! tropic, subtropic, south europe
-Blue tongue virus 1 (BTV) in ruminants
-African horse sickness virus
-V. epizootic hemorrhagic disease of ruminants
order: Reovirales
Spinareoviridae
Classification
RNA viruses with genome of dsRNA
* Non-enveloped RNA virus
* Icosahedral symmetry
* Double stranded, linear, 10-12 segmented
* No. capsomers: 92
* Diameter: 60-80 nm
Family Spinareoviridae
genus/type species
- Coltivirus: Colorado tick fever virus (CFTV) in humans
- Aquareovirus: Aquareovirus A, B, C, D, E, F in fish and watery animals
-
Orthoreovirus:
-Mammalian orthoreovirus
-Mammalian and avian reovirus = respiratory and gastrointestinal infections of animals/man
order: Reovirales
Birnaviridae
Classification
RNA viruses with genome of dsRNA
* Non-enveloped RNA virus
* Icosahedral symmetry
* Double stranded, linear, 2 segmented
* No. capsomers: 92
* Diameter: 60 nm
Family Birnaviridae
genus/types species
- Aquabirnavirus: Infectious pancreatic necrosis virus of salmonid fish
- Avibirnavirus: Infectious brusal disease virus (IBDV) of fowl (chickens)
order: Reovirales
Deltavirus
Classification
Defect RNA virus unassigned (order/family)
* Enveloped RNA virus
* ? symmetry
* Single stranded, (-), circular
* No. capsomers: ?
* Diameter: 36-43 (35-45) nm
Genus Deltavirus
Virus
- Hepatitis delta virus (human)
order/family: unassigned
Prions
Prions (protein PrP^SC): agents of spongiform encephalopaties
Agents of spongiform encephalopathies - prions (pathogenic protein PRP^SC):
* Scrapie prion (sheep)
* Bovine spongiform encephalopathy (BSE)
* Transmissible mink encephalopathy (TME)
* Chronic wasting disease of deer (CWD)
* In human:
-Creutzfeldt Jacobs Disease (CJD)
-New variant CJD (nv-CJD)
-Kuru
-Fatal familiar insomina (FFI)
-GSS syndrome
Picornaviridae
Classification
RNA viruses with genome of positive polarity
* Non-enveloped RNA virus
* Icosahedral symmetry
* Single stranded, (+), linear
* No. capsomers: 60
* Diameter: 28-30 nm
Family Picornaviridae
genus/type species
- Avihepatovirus: Dug hepatitis A virus
- Cardiovirus: Encephalomyocarditis virus
- Erbovirus: Equine erbovirus A
- Hepatovirus: Hepatovirus A (Hepatitis A virus)
- Kobuvirus: Virus Aichi A
- Parechovirus: Human parechovirus A
- Tremovirus: Tremovirus A (avian encehalomyelitis virus)
- Teschovirus: Tescovirus A / Porcine teschocirus (Teschen-Talfan disease) - porcine encephalomyelitis
-
Aphtovirus: Foot- and mouth disease virus (ruminants)
-Serotypes: O, A, C - Europe, SAT1, SAT2 SAT3 - Africa, Asia1 - Asia -
Enterovirus:
-Swine vesicular disease virus
-Swine, bovine and avian enterovirus
-Poliovirus - human polyomyelitis virus
-Human enterovirus C
Order: Picornavirales
Caliciviridae
Classification
RNA viruses with genome of positive polarity
* Non-enveloped RNA virus
* Icosahedral symmetry
* Single stranded, (+), linear
* No. capsomers: 32
* Diameter: 30-38 nm
Family Caliviviridae
genus/type species
- Lagovirus: rabbit hemorrhagic disease virus
-
Vesivirus
-Vesicular exanthema of swine virus
-Feline calicivirus - Respiratory infections
-Bovine calicivirus - Gastroenteritis
Causal agents of human gastroenteritis, mice, minks and pigs:
* Saporovirus: Sapporo virus
* Norovirus: Norwalk virus
Order: Unclassified
Hepeviridae
Classification
RNA viruses with genome of positive polarity
* Non-enveloped RNA virus
* Icosahedral symmetry
* Single stranded, (+), linear
* No. capsomers: 32
* Diameter: 27-34 nm
Family Hepeviridae
genus/type species
-
Orthohepevirus:
-Orthohepevirus A (hepatitis E virus of human)
-Avian hepatitis E virus
Order: Unclassified
Astroviridae
Classification
RNA viruses with genome of positive polarity
* Non-enveloped RNA virus
* Icosahedral symmetry
* Single stranded, (+), linear
* No. capsomers: 32
* Diameter: 28-30 nm
Family Astroviridae
genus/type species
- Avastrovirus: Aviastrovirus 1(turkey astrovirus)
- Mamastrovirus: Human astrovirus 1, causal agents of gastroenteritis in animals and man
Order: Unclassified
Flaviviridae
Classification
RNA viruses with genome of positive polarity
* Enveloped RNA virus
* Icosahedral symmetry
* Single stranded, (+), linear
* No. capsomers: ?
* Diameter: 45-60 nm
Family Flaviviridae
genus/type species
- Hepacivirus: Hepacivirus C - hepatitis C virus (HCV), human disease
-
Pestivirus:
-Intrauterine life long persistent infections
-Classical (european) swine fever virus (CSFV)
-Pestivirus A - bovine viral diarrhoea virus 1 (BVDV)
-Borader disease virus (BDV) in sheep -
Flavivirus:
-viruses with arthropod vector! (ARBO - arthropod born). Zoonoses –> meningitis, hemorrhagic fevers:
-Yellow fever virus
-Tick born encephalitis virus
-West nile virus
-Wesselsbron´s disease virus
-Dengue virus
-V. Japanese encephalitis virus
Order: Unclassified
Togaviridae
Classification
RNA viruses with genome of positive polarity
* Enveloped RNA virus
* Icosahedral symmetry
* Single stranded, (+), linear
* No. capsomers: 60
* Diameter: 50-90 nm
Family Togaviridae
genus/type species
Viruses with arthropod vector (ARBO)
* Alphavirus:
-Sindbis virus
-Equine encephalitic viruses - zoonoses:
– Eastern equine encephalitis(EEE) virus
– Western equine encephalitis(WEE) virus
– Venezuelan equine encephalitis(VEE) virus
Order: Unclassified
Matonaviridae
Classification
RNA viruses with genome of positive polarity
* Enveloped RNA virus
* Icosahedral symmetry
* Single stranded, (+), linear
* No. capsomers: 60
* Diameter: 70 nm
Family Matonaviridae
subfamily/genus/type species
Subfamily: Mammantavirinae
* Rubivirus: Rubella virus = serious intrauterine infection of human embryo
Order: Unclassified
Arteriviridae
Classification
RNA viruses with genome of positive polarity
* Enveloped RNA virus
* Icosahedral symmetry
* Single stranded, (+), linear
* No. capsomers: ?
* Diameter: 50-70 (45-60) nm
Family Arteriviridae
genus/type species
Subfamily: Equarterivirinae
* Alphaarterivirus:
-Equine alphaarteritis virus (EAV) = infectious arteritis of horses
-Porcine respiratory and reproductive syndrome virus (PRRSV)
Order: Nidovirales
Coronaviridae
Classification
RNA viruses with genome of positive polarity
* Enveloped RNA virus
* Helical symmetry
* Single stranded, (+), linear
* No. capsomers: -
* Diameter: 80-220 (80-200) nm
Family Coronaviridae
genus/type species
Subfamily: Orthocoronavirinae
Coronaviruses = gastroenteritis and respiratory infections
* Alphacoronavirus: Alphacoronavirus 1
-= Feline coronaviruses - feline enteric coronavirus (FECV), feline infectious peritonitis virus (FIPV)
-= Transmissible gastroenteritis virus (TGEV) in pigs, bovine and canine coronavirus, v. epidemic diarrhoea of pigs
* Betacoronavirus:
-Murine coronavirus
-Betacoronavirus 1
– = porcine haemagglutinating encephalomyelitis virus
– = bovine coronavirs
* Gammacoronavirus: Avian coronavirus - infectious bronchitis virus (chicken)
* Deltacoronavirus:
-Turkey, bovine and canine coronavirus = gastroenteritis
-Bulbul coronavirus HKU II
Order: Nidovirales
Tobaniviridae
Classification
RNA viruses with genome of positive polarity
* Enveloped RNA virus
* Helical symmetry
* Single stranded, (+), linear
* No. capsomers: -
* Diameter: 100-140 nm
Family Tobaniviridae
genus/type species
Subfamily: Torovirinae
* Torovirus
-Equine torovirus (Berne virus)
-Bovine torovirus (Breda virus)
-Porcine torovirus
Order: Nidovirales