RNA Synthesis Flashcards
transcription
the process of transferring genetic information from DNA to RNA
RNA Polymerase I
located in the nucleolus, synthesizes 18S, 5.8S, and 28S ribosomal RNA (rRNA)
RNA Polymerase II
carries out the transcription of genes responsible for various cellular proteins (pre-mRNA)
RNA Polymerase II
transcribes DNA that codes for small RNA, tRNA, and the 5S rRNA
sensitivity of RNA polymerases to alpha-amanitin (most sensitive to least)
pol II -> pol III -> pol I
rRNA transcription unit
transcribed as a single RNA chain, transcribes primary transcript for rRNA
Transcription factors B and S
promote binding of RNA pol I
snRNPs
small nuclear ribonucleoproteins, combine to form the spliceosome
TFIIIA, TFIIIB, TFIIIC
Transcription factors for RNA polymerase III, A and C bind to DNA and recruit B
promoter
region of DNA crucial to the accuracy and rate of transcription initiation, upstream of gene
enhancer
sequence that can up-regulate transcription of genes, can be over long distances, any orientation, upstream or downstream
TATA box
highly conserved region for binding of TBP to begin transcription
TBP
TATA Binding Protein - binds to the TATA box to initiate transcription
basal transcription factors
set of transcription factors required for the initiation of transcription
activators
bind specifically to enhancers to help regulate transcription
7 methylguanylate (m7G)
5’ cap added to the end of mRNA, help prevents degradation and is important for translation
CPSF
cleavage and poly-adenylation specificity factor, recognizes AAUAAA sequence and recruits proteins for cleaving DNA for poly A tail
Poly A polymerase
Adds A residues to the 3’ end of mRNA
introns
RNA sequence that is spliced out during processing of mRNA
exon
RNA sequence which will ultimately be spliced into functional mRNA
splicesome
a highly organized structure that splices the mRNA, contain snRNPS
alpha and beta thalassemia
disorder characterized by defective synthesis of hemoglobin chains, 25% of mutations are in sequences required for correct splicing
alternative splicing
mRNA can be spliced differently depending on the location of the cell, example: IgM antibodies and alpha-tropomyosin
Rifampicin
blocks initiation of bacterial RNA synthesis
Actinomycin D
binds to double-helical DNA and prevents if from being used as template for RNA synthesis