1. Genetic Material Flashcards
Purines
Adenine or guanine, double ringed nitrogenous bases
Pyrimidines
Cytosine or Thymine, single ringed nitrogenous bases
Nucleotide (components)
nitrogenous base, pentose sugar, phosphate group
Nucleoside (components)
Nitrogenous base, pentose sugar, linked by phosphodiester bond
positively supercoilied
twists in DNA that are introduced in the same direction as the winding of the double helix
Negatively supercoiled
twists in DNA that are introduced in the opposite direction as the winding of the double helix
topoisomerase
an enzyme that catalyzes the relaxing of supercoiled DNA
Topo 1 (action)
cleaves one strand
Topo 2 (action)
cleaves two strands
camptothecin
anti-cancer drug that inactivates Topo 1
m-AMSA
anti-cancer drug that inhibits Topo 2
Doxorubicin
anti-cancer drug that inhibits Topo 2 by an indirect mechanism
Z-DNA
left handed DNA, not present in vivo
DNA bending
common with adenine repeats, useful for connecting distant pieces of DNA
Beta-globin Gene Cluster
an example of a gene family group, located on chromosome 11
examples of junk DNA
SINES, LINES, Proviruses, psuedogenes, satellites
pseudogenes
sequences that are very closely related to functional genes but no longer code for gene products
Processed pseudogenes
DNA copies of RNA transcripts that are inserted back into an organisms genome by reverse transcription
proviruses
DNA copies of retroviruses inserted into a genome by reverse transcription
transposable elements
SINES and LINES, sequences capable of inserting copies of themselves into new genomic locations
SINEs
small, interspersed repeat elements, example: ALU sequence
LINEs
long, interspersed repeat elements, at least 50 nucleotides, the full sequence encodes a reverse transcriptase
microsatellites
short nucleotide repeats, repeats are highly polymorphic
minisatellites
SSRs with longer sequence repeats
SSRs
simple sequence repeats, for example micro and minisatellites
polymorphism
any site in the genome where there is variation if it is common
satellite sequences
highly repetitive short DNA sequences, usually at centromeres or telomeres
telomeres
at the end of human chromosomes, repeating sequence of TTAGGG