RNA metabolism Flashcards

1
Q

RNA is the only molecule that acts as a ____ and a ____

A

catalyst and a genetic transmitter

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2
Q

purines are

A

Adenine and Guanine ( two ringed)

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3
Q

Pyrimidines are _______

A

cytosine and thymine and Uracil ( one ringed)

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4
Q

which pair has 3 H-bonds

A

Guanine and cytosine

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5
Q

what is required for the syntheses of RNA

A

DNA templete strand all 4 ribonucleosides (ATP, GTP, UTP and CTP) which are the precursors for the nucleotides for RNA and MG2+

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6
Q

which way does it build the RNA strand

A

5 prime -3 prime

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7
Q

is a primer required for RNA polymerase

A

no

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8
Q

what initiates transcription

A

sigma factor and RNA polymerase

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9
Q

What is NUS A

A

protien that helps RNA pol to move further down the gene, used for elongation

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10
Q

explain the sigma or transcription cycle

A

RNA and sigma factor come together to bind at the promotor, sigma leaves, NUs A comes in and helps RNA poly move down the gene, elongation, nus a and RNA poly leave and termination

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11
Q

describe the 3 types of RNA polymerases

A

poly 1: syntheses of rRNA
poly 2: mRNA
poly 3: tRNA

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12
Q

how many subunits is poly 2 made of in humans

A

12

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13
Q

explain 5’ cap

A

a residue of 7-methylguanosine linked to the 5’-terminal residue through an unusual 5’-5’-triphosphate linkage

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14
Q

how is 5’ cap formed

A

condensation of a molecule of GTP

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15
Q

which genes do not have introns

A

histones

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16
Q

self splicing

A

no ATP- in mitochondria and nucleus genome

17
Q

what identifies the 5’ end of an intron that can undergo splicing

A

U-A

18
Q

what identifies the 3’ end of an intron that can undergo splicing

A

G-U

19
Q

the what on the GTP acts as a nucleophile and attacks the 5’ end of U-A?

A

OH

20
Q

the OH on GTP attacks the what bond on the 5’ end on an intron?

A

U-A

21
Q

snRNAs

A

small nuclear RNAs

22
Q

the large protein complex that does the splicing

A

splicomere

23
Q

which of the 5 spurps are missing

A

U3

24
Q

whats unique about group 1 and 2 introns ( there asre four groups )

A

no enzymes required

25
Q

what is CTD

A

components of spliceosomes bound to them

26
Q

three things that identify and intron to undergo spliceing

A

1) GU at donner site
2) branching site - A
3) AG- end site (3’ end)

27
Q

Doner site

A

GU

28
Q

branching site

A

A

29
Q

accepting site

A

AG

30
Q

U1 binds to?

A

doner site (ATP)

31
Q

U2 binds to?

A

branching site (ATP)

32
Q

U4,U6 come in a U5 binds to?

A

doner site

33
Q

U1 and U4 leave and doner site and branching site come together to form?

A

lairent and intron is released

34
Q

what is cleavage signal?

A

AAUAAA (poly transcribs beyond this )