QUIZ FINALS CRAM Flashcards
Evidence of past infection
Viral DNA
Parts of ribosomes
rRNA genes
Connect mRNA codons to amino acids
tRNA genes
Largest constrictions in chromosomes, providing attachments points for spindle fibers
centromeres
protect chromosome tips
telomeres
control translation of many genes
MicroRNAs
Inactivates one X chromosomes in cells of females
Xist RNA
Two gamma + two alpha HbF
fetus
two beta + two alpha HbA
adult
two alpha chains is encoded on
chromosome 11
two beta chains is encoded on
chromosome 16
Two nucleotide primers
forward and reverse
3 steps of PCR reaction
denaturation, annealing, extension
94°C The Heat strongly separate, or denature, the DNA strands.
denaturation
temp. is decreased to 50-60°C which allows
primers to attach to complementary sequences
annealing
temp. is raised at 72-74°C just below the
optimum of Taq polymerase
extension
developed to increase sensitivity and specificity of PCR
nested pcr
transcriptase enzyme is converted to cDNA molecule and then
utilized as template sequence for following PCR reaction
reverse pcr
utilized multiple primer sets in a single PCR reaction to produce amplicons with different
sizes
multiplex pcr
is accomplished by capturing or isolating each individual nucleic acid molecule present in
a sample within many chambers, zones, or regions that can localize and concentrate the
amplification product to detectable levels
digital pcr
fluorophore-linked probes for specific PCR product detection
fluorescent dye-based real-time pcr
small fragments
faster and farther
large fragment
slowly
supercoiled circular DNA, relaxed circular DNA and linear DNA of the same
molecular weight will migrate at different rates through the gel
DNA conformation
Rate of migration is proportional to the voltage applied ↑voltage ↑rate of migration
voltage applied
Composition and ionic strength affects DNA mobility
electrophoresis buffer
for rapid recovery of DNA from gel
Gels @35 oC; Melts @ 65 oC
DNA fragments ranging 1kb to 25kb
Gels @ 35-38 oC; Mets @ 90-95 oC
steps of genome sequencing
DNA shearing, DNA bar-coding, Whole genome sequencing, Data analysis
a sample population of purified DNA is digested with one or more restriction endonucleases,
generating fragments that are several hundred to thousands of base pairs in length.
southern blot
is a variant of Southern blotting in which the samples contain undigested RNA instead of DNA.
northern blot
he molecule of interest is a protein and the probe is typically an antibody raised against that particular protein.
western blot