quiz Flashcards
molecules separate due to differences in…
charge
mass (length)
shape
electrophoresis is carried out in a buffer that provides some or all of the following properties
maintains pH
electrical conductance
protects from degradation
maintains molecules in denatured state
two types of gel matrix
agrose
polyacrylamide
when to use agrose gel matrix?
preferred matrix and large sized DNA
when to use polyacrylamide gel matrix?
used for very small sized DNA
buffer for DNA gels
TAE or TBE
buffer for RNA gels
MESA or others (may contain formaldehyde to denature RNA)
agrose concentration for BP range between 500-5000
1%
a sample loading buffer (dye) contains?
ficoll (high density agent)
EDTA (for preservation)
dyes
what is used to visualize the DNA/RNA
***ethidium bromide
other dyes/stains
radioactive/flurescent tags
for linear molecules… distance migrated is ___ related to…
inversely; length
general properties of plasmids
small DNA molecules
circular
extra chromosomal
self replicating
have only non-essential genes
often carry genes that give resistance to antibiotics
TA cloning vector
convenient method for cloning PCR products