Pulmonary Infection Flashcards
What is babesiosis and what is used to treat it ?
Babesiosis is a microscopic parasites transmitted by tick bite and results in malaria like illness with most common complication being non cardiogenic pulmonary oedema and even ARDS.
Diagnosed in peripheral blood smear which shows a tetrad or ring pattern in the RBCs and indicates babesiosis
Tx is with atovaquone and clari/azithro or a combination of clindamycin and quinine
What is Lemierre’s syndrome ?
A rare complication of bacterial pharyngitis/tonsillitis and involves an extension of the infection into the lateral pharyngeal spaces of the neck with subsequent septic thrombophlebitis of the internal jugular vein(s) with septic embolisation to the lung and subsequent cavitation /abscess . Can get empyema/ascites
Tx - Betalactamase resistant abx
What is the most common pathogenic cause of Lemierre’s ?
Fusobacterium Necrophorum
What is the CURB-65 score and what does it comprise of?
30 day mortality risk
Confusion (AMTs ≤ 8) , Urea > 7, RR ≥ 30 , BP (SBP <90 or DBP ≤ 60mmHg) ; Age ≥ 65
What are the 30 day mortality risks for each of the CURB-65 severity scores (Low, Moderate, High)?
Low Risk (0-1) : 3%
Moderate Risk (2) : 9%
High Risk (3-5): 15-40%
When should CXR and be CRP be repeated in hospital as per BTS guidelines ?
If not improving after 3/7 of treatment
Failure or CRP to fall by 50% at 4 days is useful finding suggesting failure of tx / development of lung abscess /effusion
What is the empirical abx for low severity CAP?
Amoxicillin 500mg TDS
(Alternate: Clarithromycin, Doxycycline)
(If can’t tolerate oral then IV amox or IV Ben Pen)
What is the empirical abx for moderate severity CAP?
Amoxicillin 500mg TDS (+ Clarithromycin 500mg BD)
(If can’t tolerate PO then IV amox + clari , Ben-Pen + Clari)
(Alternative: Doxycycline, Levofloxacin / Moxifloxaxin)
What is the empirical abx for high severity CAP?
Co-amoxiclav and Clari
(If pen allergic 2nd generation cephlasporin- Cefuroxime and Clari ; 3rd generation cephlasporin - Ceftriaxone and Clari)
How long do BTS/NICE recommend for abx in pneumonia
Low/ Moderate: BTS 7/7 , NICE 5/7
High: BTS/NICE: 7-10 /7
What to do if failure of empirical treatment in CAP?
Low Severity: Add macrolide
Mod Severity: Change to Doxycycline/ Fluoroquinolone
High Severity: Add Fluroquinolone
What is PVL-SA Pneumonia?
Panton Valentine Leukocidin (PVL) Staph Aureus (SA) is a rare cause of high severity pneumonia and can be associated with rapid lung cavitation and multi organ failure
If strongly suspected:
IV Linezolid 600mg BD, IV Clindamycin 1.2g QDS and Rifampicin 600mg BD
What is the preferred abx for S.Pneumoniae?
Amoxicillin 500mg- 1g TDS PO (Ben Pen 1.2g QDS IV if need IV)
Alternative: Clarithromycin or Cefuroxime, Cefotaxime, Ceftriaxone)
What is the preferred abx for M.Pneumoniae (C.Pneumoniae)?
Clarithromycin 500mg BD PO/IV
(Alternative Doxycycline or Fluoquinolone)
What is the preferred abx for C.Psittaci?
Doxycycline 200mg PO stat , then 100mg OD
(Alternate - Clari)
What is the preferred abx for Legionella ?
Fluoroquinolones PO/IV
(Alternative: Clarithromycin)
What is the preferred abx for H.Influenzae?
Non-Beta Lactamase producing: Amoxicillin
Beta Lactamase producing : Co-Amoxiclav
(Alternatives: Cefuroxime, Cefotaxime, Ceftriaxone, Fluroquinolone)
What is the preferred abx for Gram -ve enteric bacilli?
Cefuroxime, Cefotaxime, Ceftriaxone
(alternative: Fluroquinolone or Imipenem or Meropenem)
What is the preferred abx for Pseudomonas Aeruginosa?
Ceftazidine 2g TDS plus Gentamicin /Tobramycin
(alternate : Ciprofloxacin 400mg BD IV or Piperacillin 4g TDS plus Gent/Tobra
What is the preferred abx for S.aureus?
Non MRSA: Flucloxacillin 1-2g IV QDS +/- Rifampicin
MRSA: Vancomycin or Linezolid or Teicoplanin +/- Rifampicin
What is the preferred abx for Aspiration?
Co- Amoxiclav
What micro tests needed in different severity CAP?
Low Severity: None unless complicated, co-morbid or failing to improve
Moderate Severity: BC , Sputum (if expectorating and no prev abx; but only gram stain if complicated), Strep Pneumoniae urinary antigen , Legionella antigens (BTS - no, NICE - yes) , Mycoplasma if outbreak
High severity: BC, Sputum culture + gram stain, S.Pneumoniae antigen , Legionella antigen , Mycoplasma, Chlamydophillia
NICE recommends stopping abx treatments for pneumonia after 5 days unless evidence for need of longer course, which is provided by what?
Fever in the past 48 hours (>37.8)
HR>100, RR> 24, BP <90 , Sats <90
What do we need to be aware of with prescribing fluroquinolones ?
Stop if any sign of adverse features (tendonitis) , prescribe with caution over 60 yo and try to avoid co-administration with steroids
Aortic aneurysm and dissection
What is the preferred macrolide in pregnancy?
Erythromycin
What is the main bacterial infection causing CAP?
S.Pneumoniae
(M.Pneumoniae occurs in outbreaks every 4 years)
(NB bacteria most common cause of CAP but viral accounts for 13%)
Does testing for pneumococcal and legionella in moderate to high severity CAP make a difference?
In moderate to high severity CAP abx prescribing guided by Pneumococcal /Legionella antigen testing was not significantly different to a strategy that used broad spectrum abx without antigen testing for outcomes of mortality, clinical response and hospital admission
Why avoid doxycycline in pregnancy?
Avoid in pregnancy and breast feeding as deposits in growing bone/teeth
What is the strongest independent risk factor for invasive pneumococcal disease in immunocompetent patients ?
Smoking
What are common bacteria causing CAP in COPD?
H.Influenzae and M. catarrhalis
What causes hypoxia in pneumonia?
VQ mismatch
Outline S.Pneumoniae
Commonest cause of bacterial CAP
High fever and pleuritic chest pain in young adults, in the elderly can be atypical
Austrian Syndrome: Meningitis , Endocarditis and Pneumonia caused by S.Pneumoniae (now very rare but mortality 60%)
What are the main viral causes of CAP?
Human Rhinovirus
Influenza A/B
Outline Legionnaire’s Disease
Legionnaire’s is Pneumonia is caused by Legionella pneumophilia .
Increased risk if: increased age, male, smoking, EtOH XS, immunosuppression, HIV, exposure to contaminated water (hot tubs, air con units)
Often associated with: altered mental state, neuro/GI sx, abnormal LFTs, high CK and low sodium
Tx: 10-14 days Fluoroquinolones (Cipro +/- Azitrhom) inform HPU
Pontiac Syndrome: self limiting , non pneumonic form of Legionnaires assoc with fever
Outline features associated with M.Pneumoniae
Affects younger patients
Prominent extra pulmonary involvement:
- haemolysis
- cold agglutins
- hepatitis
- skin
- joint problems
May cause primary small airways involvement : tree in bud on CT
Outline Staph Aureus
More common in winter months often recent/concurrent influenza
Risk of MRSA (if hospital or abx last 90/7 recent influenza, hemodialysis. c previous MRSA, CCF)
PVL SA: necrosis , cavitation and multi organ failure ; tx Linezolid + Clindamycin + Rifampicin
Outline Coxiella Burnetti (Q fever)
Dry cough, fever , headache , animal sources (sheeps/goats)
Tx: 14 days Doxycycline /Clarithromycin
What is VAP and what causes it?
Ventilator Associated Pneumonia , occurs in ICU patients who have received mechanical ventilation for >48 hours
EARLY VAP (before 5/7) :
Strep Pneumoniae
H. Influenzae
Methicillin Sensitive Staph Aureus
LATE VAP (after 5/7);
Pseudomonas Aeuroginosa
Acinetobacter Baumanii
MRSA
Gram -ve Bacilli
Who is at high risk of developing MDR pathogens in HAP/VAP?
- Admitted to unit with high rates of MDR pathogens
- Prior abx use
- Recent prolonged hospitalization >5 days
- Previous colonization of MDR pathogen
What is a HAP?
Hospital Acquired Pneumonia, new radiographic infiltrates with evidence of infection and >48 after hospital admission. Accounts for 15% of hospital infections.
Caused by aspiration of infected upper airway secretions from the inhalation of bacteria from infected equipment or haemotogenous spread
What are the different organisms commonly causing HAP?
S.Pneumoniae/H.Influenzae : following trauma
S.Aureus: incr in ventilated neurosurgical patients
P.Aeruginosa: I&V > 8days , COPD, prolonged abx
Acinetobacter: I&V and previous broad spectrum abx
Anaerobic bacteria: Recent abdominal surgery
Is CURB-65 validated in HAP?
No
In VAP undergoing bronchs what are the significant cut offs for bacteria?
Protected Specimen Brush (PSB) : >1000 cfu/ml
BAL >10,000 cfu/ml
What are the stages of aspiration pneumonia ?
Chemical Pneumonitis: occurs within 1-2 hours, low grade fever and CXR changes with 2 hours ; need abx as acid damaged lung high risk
Bacterial infection
Mechanical obstruction
What causes lung abscess ?
Bacterial inoculum reaches the lung parenchyma (often dependent area) , pneumonitis , followed by necrosis over 7-14 days. Cavitation occurs when the parenchymal necrosis leads to communication with the bronchi’s and entry of air and expectoration of necrotic material leads to air-fluid level. Bronchial obstruction leads to atelectasis with stasis and subsequent infection which can predispose to abscess formation
How do we normally treat lung abscess ?
Co-Amox and Clindamycin (commonly
IV for 1-2 weeks, followed by PO for 4-6 weeks)
Rarely beed surgery , but more likely if:
- large diameter >6cm
- resistant organism
- haemorrhage
- recurrent disease
Describe key points for Nocardia
Clinical/ Imaging: Lobar consolidation (cavities in 30%), CNS (5-40%) and skin abscess (10%)
Who: Immunocompromised (often post transplant)
Micro: Gram +ve , Acid fast, filamentous rod
Tx: 6 MONTHS Septrin , Amikacin, 3rd generation cephalsporin (Ceph)
Describe key point for actinomyces
Clinical/ Imaging: Patchy consolidation may mimic TB/Cancer as also involves LN; suspect if lung and soft tissue infection of H&N
Who:Dental work /aspiration . Immunocompromised or COPD w poor dental hygeine
Micro: Gram +ve filamentous bacteria with yellowish sulphar granules
Tx: Penicillin for 6 months
Describe key points for anthrax
Clinical/ Imaging: Flu like illness cutaneous oedema and necrotic ulceration. Meningitis (fatal), hemorrhagic pleural effusion
Who: Inhalational (worse prognosis) vs cutaneous
Micro: Gram +ve spore forming bacillus
Tx: Cipro + Clinda +/- anti toxin +/- IVIG
Inform ID and public health
Describe key points for tularaemia
Clinical/ Imaging: fever and dry cough , tender ulcer and regional lymphadenopathy - ulceroglandular tularaemia
Who: Type A worse than B; rural - farmer/hunter
Micro: Gram -ve
Tx: 10-14 days Cipro ; Streptomycin / Gentamicin
Describe key points for meliodosis
Clinical/ Imaging: Cavitstion/empyema /nodular consolidation
Who: Returning travelers from Asia/Australasia with CAP/ subacute chronic TB like picture
Micro: Gram -ve bacillus
Tx: 3 months treatment : IV Ceftazidine/ IV meropenem /IV Imipenem (Septrin)
Outline leptospirosis
Clinical/ Imaging: Asymptomatic > multi organ failure, Weil’s disease is fever, myalgia , conjunctival haemorrhage , rash, jaundice /hepatic failure , renal failure , cosgulopathy and thrombocytopenia , shock , myocarditis / cardiac arrhythmias
Who: Vets/farmers/sewage workers
Micro: zoonosis
Tx: 7 days Penicillin/Ceftriaxone / doxycycline
What is the definition of MDR TB?
Resistance to at least Isoniazid and Rifampicin
Or
Rifampicin
What is the definition of pre-extensively drug resistant TB?
Resistance to isoniazid and Rifampicin and either a Fluroquinolone or second line injectable agent but not both
What is the definition of extensively drug resistant TB - XDR-TB?
Resistance to isoniazid and Rifampicin and Fluoroquinolone and any one of the remaining first line drugs for MDR-TB
What is the risk of an aspergilloma forming in a cavity >2cm in diameter?
15-20%
What are the discharge criteria for patients with pneumonia ?
Patients should not have more than one of the following:
T>37.8
HR>100
RR>24
Sats <90%
BP <90
Poor oral intake
Abnormal mental state
What are features of mucomycosis and how do we treat ?
Black lesions in mouth and CT demonstrating bilateral nodular lesions and cavitations. Seen post COVID . Tx with Amphotericin
What respiratory support do we offer patients with COVID not responding to FiO2 40% ?
CPAP
Do not routinely offer HFNO, unless unable to tolerate CPAP etc
What therapeutics can we give to patients with COVID-19 who do not need supplemental O2 but high risk of progressing ?
Nirmatrelvir/ritonavir (PO)
Molnupiravir (within 5/7 , can have 5/7 treatment , not for preggos, PO)
Sotrovimab (if >40kg, if Nirmatrelvir/ritonavir unsuitable)
Who gets Remdesevir in COVID-19?
Consider course (upto 5/7) in those who have COVID-19 and are in hospital needing low flow supplemental O2
(Don’t use on those req HFNO/CPAP/NIV / I&V)
What course of steroids do patients receive with COVID?
Dexamethasone 6mg PO OD for upto 10 days (unless discharged)
For those who need supplemental
O2 (nb can also be Pred 40mg and Hydrocortisone 50mg TDS)
Who gets Toculizumab in COVID-19?
Can have if having systemic steroids and needing supplemental O2
Who gets Barcitinib in COVID 19?
Need O2 and having /have completed steroids and no evidence of infection (NB c/I in pregnancy and breast feeding) . May be considered in ppl that can’t have Toci or if clinical deterioration despite Toci
What are the complications of COVID and how do we combat them?
AKI - can be common associated with increased mortality, monitor ppl with CKD for at least 2 years after AKI
Acute MI- increased Trop and BNP, ECG changes
VTE- prophylactic LMWH req low flow/high flow O2. Continue with prophylactic dose for 7 days including after discharge . Tx dose if on CPAP /HFNO/I&V
What are the signs of failure of CPAP/HFNO/NIV
Limited response within 6 hours
Lack of improvement in 3/7
Unchanged /increased work of breathing
Not tolerating CPAP /NIV
Remember days on CPAP impact on suitability for ECMO
What are the considerations for pregnant women with COVID-19?
- Can prone up until 28 weeks (with appropriate padding)
- Can use Tocilizumab /Sarulimab in those with CRP>75 or admitted to ICU (can use Ronapreve IV or Sotrovimab) ONLY give remdesevir if worsening
- Steroids ;
- if req for pre term delivery Dex 12mg x2 in 24 hours then Pred
- if not req for Pre term delivery Pred 40mg OD and then hydrocortisone
What is Aspergillus?
Ubiquitous fungus causing variety of clinical syndromes.
Aspergillus Fumigatus is the most common species in pulmonary syndromes
Aspergillus Flavus more common cause of allergic rhinosinusitis , post operative aspergillosis and fungal keratosis
Aspergillus Terreus: common cause of IA in some places and Amphotericin B resistant
Aspergillus Niger: occ causes IA/aspergillus bronchitis but more common colonises respiratory tract