Proteins and Enzymes Flashcards

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1
Q

what are proteins?

A

large polymers (polypeptide chain) made up of amino acids

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2
Q

where are proteins made?

A
  • created in the ribosome
  • folded and modified in the golgi apparatus
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3
Q

what’s the first structure that forms to make a protein?

A

polypeptide chain

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4
Q

what is the primary structure of a protein?

A

the sequence of amino acids in a polypeptide chain

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5
Q

what does DNA determine in the polypeptide chain?

A

the order of amino acids
- this will alter how the protein folds and bonds

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6
Q

how many different amino acids are there?

A

20

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7
Q

how is the polypeptide chain created?

A

condensation reactions between amino acids

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8
Q

what is the secondary structure of a protein?

A

the sequence of amino acids cause parts of the protein to being bent into a helix or folded into b pleated sheets

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9
Q

what bonds hold the secondary structure of a protein in place?

A

Hydrogen bonds between the carboxyl group (COOH) and the amine group (NH2)

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10
Q

why are hydrogen bonds strong in the secondary structure?

A

because even though H bonds are weak there’s lots of them that provide collective strength

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11
Q

what is a tertiary structure?

A

when the secondary structure is bent and folded further to form a precise 3D shape

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12
Q

what bonds hold the tertiary and quaternary structure in place?

A

hydrogen, ionic and disulphide bonds

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13
Q

what do disulphide bonds form between?

A

the R-groups of 2 amino acids that contain sulfur

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14
Q

what is a quaternary structure?

A

a protein made up of 1 or more polypeptide chains

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15
Q

what is the group called attached to a protein but not made up of amino acids?

A

prosthetic group

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16
Q

what is a protein with a prosthetic group called?

A

a conjugated protein

17
Q

what are the properties of fibrous proteins?

A
  • polypeptide chains form long twisted strands linked together
  • stable structure
  • insoluble in water
  • strength gives structural function
18
Q

what shape do fibrous proteins form when folded?

A

long, rope-like shapes

19
Q

what are the properties of a globular protein?

A
  • quite unstable structure
  • soluble
  • metabolic functions
20
Q

what shape do globular proteins form when folded?

A

spherical

21
Q

what forms fibrous and globular proteins?

A

the 3D folding in tertiary and quaternary proteins

22
Q

what is an enzyme?

A

a biological catalyst
- speed up a reaction without being used up

23
Q

how is the active site of an enzyme specific in shape?

A

unique in shape due to the specific folding and bonding in the tertiary structure of the protein

24
Q

are enzymes globular or fibrous?

A

globular

25
Q

how is the lock-and-key method different to the induced fit one?

A
  • induced fit model suggests that the active site changes shape to be complementary to the substrate
  • lock and key suggests enzymes are a fixed shape and the active site doesn’t change
26
Q

how does temperature affect enzyme activity?

A
  • too low - not enough kinetic energy for successful collisions
  • too high - enzymes denature so the active site changes shape so the enzyme substrate complexes can’t form
27
Q

how does pH affect enzyme activity?

A

the pH will interfere with the charges in the amino acids in the active site causing the enzyme to denature

28
Q

how can concentration affect enzyme activity?

A
  • not enough substrate - fewer collisions so slower reaction
  • not enough enzyme - active site will become saturated with the substrate and unable to work any faster
29
Q

what are competitive inhibitors?

A
  • same shape as the substrate so can bind to the active site
  • prevents substrate from binding and reaction occurring
30
Q

what are non-competitive inhibitors?

A
  • bind to the enzyme away from the active site , allosteric site
  • changes the shape of the active site
  • substrate can no longer bind