Presentations 3 and 4 Flashcards

1
Q

In the manuscript, The Mcm2-Ctf4-Polα Axis Facilitates Parental Histone H3-H4 Transfer to Lagging Strands by Gan et al., what polymerase subunit is involved in facilitating H3-H4 parental histone tetramers to the leading strand of newly synthesized chromatin:

A

Pol epsilon (a)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

In this article, what results were observed in parental histone transfer in mutant mcm2 cells with defective histone binding domains?

A

H3K4me3 showed a large reduction in parental histone transfer to the lagging strand
(C)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

Which of the following is not a characteristic of ctf4?

A
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

A mutation in which of the following proteins resulted in the greatest reduction of H3K4me parental histone transfer to the lagging strand?

A

Ctcf4
(B)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

In the manuscript, The Mcm2-Ctf4-Pola Axis Facilitates Parental Histone H3-H4 Transfer to Lagging Strands by Gan et al. (2018), researchers investigated H3-H4 histone transfer in ctf4Δ mutant cells, results of an eSPAN procedure indicated what?

A

Strong leading bias of H3K4me3 and strong lagging bias of H3K56ac
(C)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

In the manuscript, The Mcm2-Ctf4-Pola Axis Facilitates Parental Histone H3-H4 Transfer to Lagging Strands by Gan et al. (2018), four different mutant cell types were used, these included:

A

Mcm2-3A, ctf4Δ, ctf4-4E and pol1-4A cells
(D)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

In the manuscript, The Mcm2-Ctf4-Pola Axis Facilitates Parental Histone H3-H4 Transfer to Lagging Strands by Gan et al. (2018), researchers utilized the RITE system. What does ‘RITE’ stand for?

A

Recombination-Induced Tag Exchange
(B)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

In the manuscript, The Mcm2-Ctf4-Pola Axis Facilitates Parental Histone H3-H4 Transfer to Lagging Strands by Gan et al. (2018), researchers investigated H3-H4 histone transfer to the leading and lagging strands. What was the novel technique used in this study?

A
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

In the manuscript, The Mcm2-Ctf4-Pola Axis Facilitates Parental Histone H3-H4 Transfer to Lagging Strands by Gan et al., which factors were found to facilitate the transfer of H3-H4 tetramers to the leading and lagging strands during chromatin replication:

A
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

Based on the study conducted in The Mcm2-Ctf4-Pola Axis Facilitates Parental Histone H3-H4 Transfer to Lagging Strands by Gan et al., it was proposed that future studies should look into:

A

Two of the above are correct
(E)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

Histones and the post-translational modifications (PTMs) on them are inherited via:

A
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

The process of preparing chromatin (experimental rundown) to study the parental H3-H4 histone transfer involved:

A
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

______ histone (H3-H4)2 tetramers transfer to the _____ strand via Polε’s while transferring to the lagging strand via ______.

A
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

Recombination-induced tag exchange (RITE) system uses antibody tags to differentially tag parental and newly synthesized histones. This technique was used in mcm2-3A cells. Which tag represents which histone H3 modification in these mutated cells, and what is the impact of the strand bias?

A
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

It was noted through eSPAN peaks that ctf4Δ, pol1-4A, and mcm2-3A mutations all revealed similar strand bias patterns. What did Gan et al. observe when investigating the impact that the ctf4Δ, pol1-4A, and mcm2-3A mutations had on strand bias?

A
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

Select the correct answer regarding Ctf4’s role in the replication fork.

A
17
Q

What two properties of recycled H3.3 and H3.1 parental histones are important to understand for their transmission and distribution?

A
18
Q

H3.3 colocalizes with ____-replicating chromatin and H3.1 with ___-replicating chromatin.

A

1) Early Replicating
2) Late Replicating
(B)

19
Q

Which histone chaperone is depleted to induce replication stress to visualise the impaired recycling of H3 variants?

A
20
Q

Hydroxyurea Treatment and Depletion of ASF1 both have similar implications when in comes to H3 variant histone recycling. These results are:

A

All of the above (e)

21
Q

Which of the following was already known before this research took place

A
22
Q

Which is false regarding the occupancy profiles of H3 variants during replication

A
23
Q

Which statement is true regarding H3.1 conglomerates throughout S-phase

A
24
Q

Which factor plays a key role in spatial distribution of H3 variants

A
25
Q

Replication stress was induced to investigate controlled histone recycling via:

A

Two of the above are correct (e)

26
Q

Which of these is true, with respect to global distribution of H3 variants during replication:

A
27
Q

H3.3 and H3.1 Genome-wide occupancy relative to replication timing revealed that:

A
28
Q

Replication stress via hydroxyurea (HU) treatment:

A