Phylogeny (Exam 1) Flashcards

1
Q

Analogous Structure

A

Characteristics that is similar because of convergent evolution, not homology

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2
Q

Analogy

A

Similarity of function/superficial resemblance that have different origins

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3
Q

Animalia

A

Kingdom that constitutes all animals, the largest kingdom (Multicellular eukaryotes, no chlorophyll or cell wall, heterotrophs)

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4
Q

Archaea

A

Group of micro-organisms that are similar to bacteria, have tRNAs, rRNAs, no peptidoglycan

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5
Q

Bacteria

A

Small single celled organisms

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6
Q

Basal Taxon

A

Specified group of organisms, evolutionary lineage diverged early in the history of the group (Not outgroup)

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7
Q

Binomial Nomenclature

A

2 part, latinized format for naming species, consisting of the genus and specific epithet

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8
Q

Branch Point

A

The representation on a phylogenetic tree of the divergence of 2+ taxa from a common ancestor

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9
Q

Clade

A

A branch on a phylogenetic tree that’s monophyletic

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10
Q

Cladistics

A

Approach to systematics where organisms are placed into groups called clades based on primarily common descent

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11
Q

Class

A

Taxonomic rank for the scientific classification of organisms below phylum, above order

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12
Q

Domain

A

A taxonomic level consisting of bacteria, archaea, and eukarya

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13
Q

Eukarya

A

Domain that contains eukaryotes or organisms with a true nucleus

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14
Q

Eukaryote

A

Organism composed of cells that have membrane bound nucleus and several other membrane bound compartments

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15
Q

Eukaryote-First Hypothesis

A

Theory that eukaryotes arose by fusing archaean cells and bacteria where archaea engulfed an aerobic bacteria cell

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16
Q

Family

A

Taxonomic rank between order and genus

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17
Q

Fungi

A

Type of eukaryotic organism that doesn’t have chlorophyll, non vascular, and has sexual and asexual reproduction

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18
Q

Gene Transfer Agent

A

DNA containing virus particles that are produced by some bacteria and archaea (Mediate horizontal gene transfer)

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19
Q

Genome Fusion

A

Gene made by joining parts of 2 different genes, part of chromosome A moves to chromosome B

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20
Q

Genus

A

Taxonomic rank, group marked by similarities across the group

21
Q

Homologous Structure

A

Structures in different species that are similar because of common ancestry

22
Q

Homology

A

Similar structures/anatomical position across groups, but not always function

23
Q

Horizontal Gene Transfer

A

The transfer of genes from 1 genome to another through mechanisms such as transposable elements, plasmid exchange, viral activity, and fusion of different organisms

24
Q

Kingdom

A

Taxonomic rank composed of smaller groups, general taxon in classifying organisms

25
Maximum Parsimony
Principle that states that when considering multiple explanations for an observation, one should first investigate the simplest explanation that is consistent with the facts
26
Mitochondria-First Hypothesis
Proposes that mitochondria were first established in a prokaryotic host, got a nucleus to be the first eukaryotic cell
27
Molecular Systematics
Technique using molecular evidence to identify phylogenetic relationships
28
Monophyletic
A group of taxa that consists of a common ancestor and all of its descendants
29
Nucleus-First Hypothesis
Proposes that the nucleus evolved in prokaryotes first, followed by fusing this new eukaryote with bacteria, that then became mitochondria
30
Order
Taxonomic rank by nomenclature codes
31
Orthologous Genes
Homologous genes found in different taxa as a result of a speciation event
32
Outgroup
Distantly related taxon that possesses the ancestral state for all characters
33
Paraphyletic
A group of taxa that consists of a common ancestor and some, not all, of its descendants
34
Phylogenetic Tree
A branching diagram that represents a hypothesis about the evolutionary history of a group of organisms
35
Phylogeny
The evolutionary history of a species/group of related species
36
Phylum
Taxonomic rank, many of these relationships are unclear/disrupted
37
Plantae
Includes all plants, eukaryotic, multicellular, autotrophic organisms that have a cell wall
38
Polyphyletic
A group of taxa that includes distantly related organisms but doesn't include the most recent common ancestor
39
Polytomy
Term for an internal node of a cladogram that has more than 2 immediate descendants
40
Prokaryote
Unicellular organism that lacks a nucleus or any other membrane bound organelle
41
Rooted
A phylogenetic tree containing the branch point representing the most recent common ancestor of all taxa in the tree
42
Shared Ancestral Character
A character, shared by members of a clade, that originated in an ancestor that is not a member of the clade
43
Shared Derived Character
An evolutionary novelty that is unique to a particular clade
44
Sister Taxa
Groups of organisms that share an immediate common ancestor and hence are each other's closest relatives
45
Species
Group of populations that interbreed and produce fertile offspring
46
Systematics
Branch of biology that classifies organisms with nomenclature and taxonomy
47
Taxon
Group of 1 or more populations of an organism
48
Taxonomy
A scientific discipline concerned with naming and classifying the diverse forms of life