Phylogenetics Flashcards

1
Q

What are hybrid zones?

A

Areas or regions where different species with incomplete reproductive barriers mate and produce hybrids.

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2
Q

What are the three possible outcomes of hybrid zones?

A
  1. Reinforcement
  2. Fusion
  3. Stability
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3
Q

What happens in reinforcement?

A

The barriers for reproduction become stronger and the differences between the species are reinforced.

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4
Q

What happens in fusion?

A

The barriers for reproduction are weakened and the differences between the species are also weakened.

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5
Q

What happens in stability?

A

The barriers for reproduction remain intact.

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6
Q

What does the biological species concept emphasize?

A

Reproductive isolation

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7
Q

What is cladistics?

A

A way of organizing information according to similarities. In biology, it is used to assess what organisms are more similar to one another (we then assume this correlates with ancestry).

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8
Q

How are evolutionary relationships determined in the absence of DNA?

A

Through morphology: outward appearance (shape, structure, color, pattern) of an organism or taxon and its component parts.

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9
Q

What do cladistics reveal about evolution?

A

It identifies convergent evolution, allowing us to examine what happened in the fossil record.

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10
Q

What is a phylogenetic tree?

A

The mathematical structure used to depict the evolutionary history of a group of organisms or genes.

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11
Q

Do phylogenetic trees show similarities between organisms or historical relationships?

A

Historical relationships.

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12
Q

What is systematics?

A

The discipline that focuses on inferring the phylogenetic relationships of organisms and creating classifications based on their evolutionary histories.

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13
Q

What is homology?

A

Similarity arising from common ancestry.

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14
Q

What are homologous characters?

A

Characters present in a group of species due to shared ancestry.

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15
Q

What are analogous/homoplastic characters?

A

Characters present in certain species that have evolved independently. (convergent evolution)

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16
Q

In a phylogenetic tree, what is a branch point?

A

A branch point is where lineages diverge.

17
Q

What is a polytomy?

A

An unresolved pattern of divergence.

18
Q

What are shared ancestral characters?

A

Characters shared beyond the taxon we are trying to define.

19
Q

What are shared derived characters?

A

Evolutionary novelties unique to a particular clade.

20
Q

What are phylogenetic trees built from?

A

Characters (or sites); can be morphological, behavioral, physiological, or molecular.

21
Q

What are the two important assumptions about phylogenetic characters?

A
  1. They are homologous
  2. They are evolving independently from each other.
22
Q

What does a monophyletic group (clade) consist of?

A

An ancestral species and all of its descendants.

23
Q

What does a paraphyletic group consist of?

A

An ancestral species and some of its descendants.

24
Q

What does a polyphyletic group consist of?

A

A group of species that does not include their common ancestor.