Pharmacogenomics Flashcards
- What is pharmacogenetics❓
2. What is pharmagenomics❓
- Study of individual gene-drug interactions
- Study of genomic influence on drug response
The human genome project was a research program for mapping and understanding of all the genes in human beings.
When did it begin❓
When was it completed❓
How many genes were discovered❓
1984
2003
20,500 genes
If humans are 99.9% identical at the DNA level, what influences the differences in appearance/behavior/response to medications❓
The 0.1% difference is responsible about 3,000,000 specific DNA differences btwn pple
What are mutations❓
What is the normal codon for:
- Methionine
- Valine
- Leucine
- Serine
- Proline
- Tyrosine
Changes in DNA
- ATG
- GTG
- CTG
- TCT
- CCT
- ACT
What would you observe with administration of suxamethonium to a patient deficient in serum pseudocholinesterase❓
What is the rate of prevalence of this deficiency❓
Prolonged respiratory paralysis
1 in 2000 caucasians
What would you observe with administration of an anti-malaria to a patient deficient in G6PD❓
What is the rate of prevalence of this deficiency❓
Hemolysis of RBC (anemia)
1 in 100 African American
What enzyme is probably deficient in a pt that presents with bone marrow toxicity from administration of thiopurine/mercaptopurine❓
Thiopurine methyl transferase (TPMT)
- 70% -High expression
- 20% -Medium
- 2% -Low
- A deficiency in N-acetylase (NAT2) transferase will lead to a slow inactivation of which drugs❓
- What is the rate of prevalence of this deficiency….
a) Caucasians
b) Africans
- Isoniazid
Dapsone
2.
a. 45-65%
b. 10-15%
ADRs rank as the fourth leading cause of death (40,000-100,000 per year)
True or false
True
Drugs have a patent life of about 20 years
True or false❓
True
Cytochrome P450 is a family of isozymes that bio transform several drugs.
How many genes code for it❓
Divided among how families❓
Which are responsible for metabolizing most clinically important drugs❓
57 genes
18 families
CYP 2A6
CYP 2B6
CYP 2C9
CYP 2C19
CYP 2D6
CYP 2E1
CYP 3A4
What is the function of CYP1❓
How many subfamilies does it have❓
How many genes does it have❓
Drugs metab
Steroid (esp. estrogen) metab
2 subfamilies
3 genes
What is the function of CYP2❓
How many subfamilies does it have❓
How many genes does it have❓
Drug and steroid metab
13 subfamilies
16 genes
What is the function of CYP3❓
How many subfamilies does it have❓
How many genes does it have❓
Drug and steroid (+testosterone) metab
1 subfamily
4 genes
The CYP enzyme, 1A1, is responsible for the metabolism of which drugs❓
Caffeine
Testosterone
R-Warfarin
The CYP enzyme, 1A2, is responsible for the metabolism of which drugs❓
Acetaminophen
Caffeine
R-Warfarin
Phenacetin
The CYP enzyme, 2A6, is responsible for the metabolism of which drugs❓
Testosterone
17beta-Estradiol
The CYP enzyme, 2B6, is responsible for the metabolism of which drugs❓
Cyclophosphamide
Erythromycin
Testosterone
The CYP enzyme, 2C-family, is responsible for the metabolism of which drugs❓
Acetaminophen
Testosterone
R-Warfarin
Phenytoin Zidovudine S-Warfarin Hexobarbital Tolbutamide
The CYP enzyme, 2E1, is responsible for the metabolism of which drugs❓
Acetaminophen
Caffeine
The CYP enzyme, 2D6, is responsible for the metabolism of which drugs❓
Acetaminophen
Codeine
The CYP enzyme, 3A4, is responsible for the metabolism of which drugs❓
Acetaminophen Caffeine Cyclophosphamide Testosterone S and R-Warfarin
Erythromycin Phenytoin Carbamazepine Cortisol Zidovudine
- What substance can induce the action of CYP 3A4,5,7 on Felodipine❓
- a. What substance can inhibit it❓
b. Will its concentration ⬆️/⬇️❓
- Glucocorticoid
2a. Grapefruit juice
b. It will increase if 3A4,5,7 is inhibited
- What substance can induce the action of CYP 1A2 on Clozapine/Haloperidol❓
- a. What substance can inhibit it❓
b. Will its concentration ⬆️/⬇️❓
- Tobacco smoke
2a. Cimetidine
b. It will increase if 1A2 is inhibited
What is the risk associated with CYP enzyme inhibition❓
Inhibition of enzyme ⬇️ Decreased degradation of drug ⬇️ Increased drug plasma conc. ⬇️ Risk of adverse effect
What is the risk associated with CYP enzyme induction❓
Increased degradation ⬇️ Decreased drug plasma conc. ⬇️ 🚫pharmacological effect ⬇️ Risk of therapeutic failure
What do tricyclic antidepressants do❓
⬇️serotonin reuptake
⬆️serotonin levels in cleft
Response rates of antidepressants are low (1/3 +)
- True or false
- Why❓
- Give examples of TCA
- Give examples of SSRI
- True
- Biomarkers that can predict clinical efficacy or safety responses are not utilized
- Nortriptyline
Imipramine - Fluoxetine
Paroxetine
Which CYP enzyme is the most investigated with regard to antidepressant pharmacogenomics❓
CYP 2D6
Hanson’s
Havana
- Which drug group does codeine belong❓
- Is codeine a pro-drug❓
- What is it’s metabolizing enzyme❓
- What is the rate of deficiency of this enzyme❓
- Opioid
- Yes, it must be metabolized into morphine for activity
- CYT P450
Allele CYP 2D6
7% of Caucasians are deficient
- Which drug group does tamoxifen belong❓
- What is it’s metabolizing enzyme❓
- What is it metabolized to for its activity❓
- What is the rate of deficiency of this enzyme❓
- Antineoplastic (breast ca)
- CYP 2DE
- Endoxifen
6-10% European population
What are the benefits of pharmacogenomics❓
What are it’s limitations❓
1. Max. drug efficacy Min. drug toxicity Predict pt that respond to interventions Aid in new drug development
2.
Costs and access to technology
Confidentiality of information