Pharmacogenetics Flashcards

1
Q

What is one of the leading causes of hospitalization and death in the US?

A

Adverse drug reactions

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2
Q

What term can be used to describe current pharmacologic practice?

A

“One size fits all” > based on the “average” patient

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3
Q

What is the role of G6PD in the body?

A

Supplies NADPH and glutathione in RBC’s

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4
Q

What is the nature of a G6PD deficiency mutation and what are the most common types?

A

Mutation is sex-linked and carried on X chromosome; SNPs

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5
Q

What is the main difference between pharmacogenetics and pharmacogenomics?

A

Pharmacogenetics focuses on a single gene and pharmacogenomics focuses on a multi gene approach

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6
Q

What are most drugs metabolized by?

A

A Cyp450 subtype

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7
Q

What are SNPs?

A

Small nucleotide changes, most common polymorphism

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8
Q

What are chromosomal insertions or deletions and what do they cause?

A

That are large sequence changes and can cause frameshift mutations

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9
Q

What is a frameshift mutation?

A

Insertion or deletion that alters the reading frame of a gene

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10
Q

What is a missense mutation?

A

Substitution that results in a different amino acid

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11
Q

What is a nonsense mutation?

A

Substitution that results in a stop codon

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12
Q

What is a silent mutation?

A

Substitution that results in no significant effects

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13
Q

What is an in-frame deletion or insertion?

A

Deletion or insertion of 3 nucleotides that introduces or removes an amino acid into the protein, but does not alter the reading frame

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14
Q

What is a neutral mutation?

A

Changes in amino acid sequence of a protein without altering its ability to function

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15
Q

What is a loss of function mutation?

A

Causes a complete or partial loss of a function of the protein

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16
Q

What is a gain of function mutation?

A

Causes over-activity of the protein or the appearance of a new trait or function

17
Q

What causes over 90% of human genetic variation?

18
Q

What is personalized medicine?

A

Identifying all the SNPs in patients before prescribing them drugs.
-Allows researches to study all alleles to see if there will be adverse effects

19
Q

What are the important proteins and genes involved in drug metabolism

A

G6PD, 2D6, and NAT2

20
Q

Most mutations can be categorized in two areas. What are they?

A

1) Changes in gene copy number

2) changes in function of protein

21
Q

What does a change in gene copy number result in?

A

Gene duplications, nonsense mutations, and gene deletion (Loss of function mutations)

22
Q

What enzyme is associated with metabolism of the drugs Debrisoquin, Codeine, and Nortripyline?

23
Q

What drugs does NAT2 metabolize?

A

Hydralazine, Isoniazid, and pracainamide (HIP drugs)

24
Q

How does NAT2 change protein function?

A

Transfers and acetyl group from acetyl CoA to the acceptor amine, resulting in formation of an amide on the drug

25
Is rapid acetylation dominant or recessive? What does it do to NAT2 activity and what does that result in?
Dominant Increases NAT2 activity Results in hepatotoxicity
26
Is slow acetylation dominant or recessive? What does it do to NAT2 activity and what does that result in?
Recessive Decrease NAT2 activity Results in Lupus
27
What is the phenotype of slow acetylators?
Homozygous for the slow allele (rr)
28
What is the phenotype for rapid acetylators?
Either homozygous or heterozygous for the rapid allele (RR or Rr)
29
What is the second most common metabolizing enzyme?
CYP2D6
30
What can mutations in CYP2D6 result in?
Deletions, duplications, and SNPs
31
Where is the OATP1B1 receptor located? What does it do?
Sinusoidal membrane of hepatocytes. Hepatic uptake of weakly acidic drugs and endogenous compounds
32
What does a mutation in OATP1B1 result in?
Reduced response to HMG-coenzyme A reductase inhibitors (statins) which can lead to decreased serum lipids
33
What is the human leukocyte antigen (HLA) involved in?
Immune system/response and hypersensitivity reactions such as SJS
34
The hypersensitivity response from HLA is mediated by what?
Cytotoxic CD8 T cells
35
What does the HLA-B*5701 variant result in?
Abacavir-induced skin toxicity
36
What is genotyping?
Analysis of gene variants that lead to prediction of phenotype
37
What is phenotyping?
Using a probe drug to evaluate ratio of metabolite to drug
38
What enzyme is involved in the metabolism of Dibucaine?
Serum cholinesterase