peroxisomes Flashcards

1
Q

what is the main function of peroxisomes?

A

beta fatty acid oxidation

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2
Q

what happens in zellweger syndrome?

A

lack of or low no of peroxisomes, enzymes mislocalised to the cytosol instead of peroxisomes

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3
Q

how many different complementation groups?

A

14

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4
Q

which group has milder symtoms

A

A

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5
Q

class 1 biogenesis mutants

A

affect matrix protein import

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6
Q

class 2 biogenesis mutants

A

affects membrane biogenesis so no peroxisomes

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7
Q

class3 biogenesis mutants

A

shape no. and distribution effected, miler symptoms

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8
Q

what is PTS1

A

peroxisome targetting sequence, on c ter of peroxisome enzymes

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9
Q

what two proteins form a pore in the membrane for peroxisome enzyme import?

A

pex5 and 14

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10
Q

what complex is responsible for the extraction of ubiquitinated pex5 from the membrane?

A

pex15,1,6 ATPase complex

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11
Q

steps of pulse chase experiment

A

GFP-PTS1 marker just after GAL1 promoter. switch on GAL promoter by growing on galactose for 3 hours then chase on glucose for 2 hours

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12
Q

how do peroxisomes form?

A

by fission or can form de novo in mutants

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13
Q

where are pex3 restricted to in pex19 deletion mutants

A

ER

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14
Q

assay for de novo peroxisome formation

A

constitutively express HcRed-PTS1 marker, induce GAL-GFP-PTS1 by pulsing on galactose for 3hours. then stop expression and chase. red peroxisomes de novo. oranage are formed from new and preexisting peroxisomes

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15
Q

what are dmn1 and vps1 required for?

A

normal peroxisome number

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16
Q

what other proteins are required for peroxisome fission?

A

fis1, caf4, mdv1, dmn1

17
Q

mating assay for fission

A

label vps1/dmn1 double knockouts with GFP-PTS1, galactose pulse for 3 hours, chase on glucose 2 hours, mate with pex3 deletions to recover cells. vps1 recovers the cells

18
Q

what organelle provides peroxisomes with essential membrane consituients?

19
Q

what mechanisms need to be switched on for peroxisome proliferation?

A

beta-oxidation enzymes and genes required for peroxisome biogenesis- ORE

20
Q

what does olate activate?

21
Q

what does oaf1p bind to

22
Q

what does binding of hetrodimer to oelate response element do?

A

causes peroxisome biogenesis and postive feedback to activate more pip2

23
Q

what is required for peroxisome transport to bud?

A

actin cytoskeleton and myo2 and inp2

24
Q

what does inp1 do

A

anchors peroxisomes to periphery of mother cell and captures newly arrived peroxisomes in the bud

25
what protein does inp1 interact with
pex3
26
inp3 is required for what processes?
peroxisome and vacuole inheritence
27
what protein is inp3 partially redundant with?
frk1