Patient Zero Flashcards

1
Q

Where did HIV come from

A

Red capped mangabey & spotted nose guenon infect chimpanzees

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2
Q

What are the two hypothesis for dual recombination in chimpanzees

A
  1. transcribe gsn gene and then latch onto rcm

2. both integrated into chimpanzee genome and undergo recombination

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3
Q

When are vpu and nef produced and which is effective in humans

A

vpu: late stage antitherin effective in humans
nef: early stage antitherin not effective in humans due to 5 codon diff in tetherin

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4
Q

What is the cut-hunter hypothesis

A

blood transmission from cut when hunting for meat

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5
Q

How did HIV spread

A

From cameroon and travel along train and river routes to major cities

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6
Q

What are the 4 groups of HIV-1

A

M, N, O, P

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7
Q

Which is the major group of HIV

A

M

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8
Q

Which is the latest HIV group and which animal caused it

A

P from gorilla

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9
Q

What is HIV composed of

A

2x ssRNA positive strands not mRNA equivalent since capped at ends (segmented virus)

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10
Q

What are resting T cells

A

don’t express viral protein on MHC so infection not detected

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11
Q

What receptors do HIV bind to

A

CD4 and CCR5

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12
Q

What is viral synapse

A

When HIV virus does not leave the cell but rather move laterally from one cell to other to spread around

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13
Q

What is a provirus

A

viral genome that is integrated inside host DNA

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14
Q

What enzyme integrates provirus into human chromosome

A

integrase

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15
Q

What are lipid rafts

A

areas of lipids that help with membrane trafficking and viral exocytosis

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16
Q

What does the the gag gene encode

A

Makes receptors on surface of envelope

17
Q

What is the change in gag that allows for spread in humans

A

Gag protein 17 position 30 methionine to arginine/lysine

18
Q

How does nef and vpu inhibit tetherin

A

nef binds to the cytoplasmic domain of tetherin, while vpu bind to transmembrane domain

19
Q

How does nef work in humans

A

inhibits protein trafficking such as binding to MHC class I, II, CD4 markers to destroy immune response

20
Q

How does vpu work in humans

A

disrupt membrane trafficking by binding to tetherin before it reaches the surface or binding again if it reaches the surface and sequestering it for lysosomal degradation

binds to other proteins as well

21
Q

What are the 3 things needed for HIV to adapt to humans

A

gag mutation, loss of nef anti-tetherin activity, gain of vpu activity