nature of gene and genome lecture 8 Flashcards

1
Q

who are watson and Crick?
why are they relevant?

A

watson and crick were 1st to propose structure of DNA and determine a mechanism of how DNA is copied

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2
Q

shape of DNA

A

DNA has a spiral double helix structure

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3
Q

components of DNA

A

Nitrogenous base
and repeating units of sugar and phosphate

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4
Q

2 types of nitrogenous bases which ones are H bonded together

A

purines and pyrimidines

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5
Q

where is DNA found in animal cells

A

nucleus

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6
Q

Draw nucleus organelle

A

surrounded by nuclear envelope
has double membrane

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7
Q

what does nucleus contain and state its role

A

produces ribosome
contains chromosomal DNA
site of DNA replication and transcription
communicates with cytosol via nuclear pore

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8
Q

what is a genome,
where is it located
how many in a cell

A

each cell nucleus contains identical chromosomes in 2 copies.
each copy is a genome

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9
Q

what is a gene

A

genes are functional regions of DNA
section of DNA that codes for functional RNA and proteins

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10
Q

how many chromosomes are in human genome

A

22 pairs of autosome
1 pair of sex chromosome
23 homologous pairs= haploid
46 Homologous chromosomes= diploid

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11
Q

what counts as human genome?

A

nucleus genes+ Mitochondria genes

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12
Q

what counts as plant genome

A

chloroplast genome+ nucleus genes

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13
Q

Mitochondrial gene -
how many genes does it contain?

A

mitochondria contains circular chromosome
mitochondria DNA contains 37 genes- non coding and coding regions(rRNA, tRNA)

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14
Q

Draw+ label homologous chromosomes

A

-telomere
- centromere
- paternal homolog
- maternal homolog

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15
Q

How is DNA packed into chromosome- stages

A

Double helix DNA
Nucleosome
chromatin
coiled-coil
chromosome

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16
Q

what is nucleosome?

A

DNA histone complex
there are 4 core histones which bind to DNA in any combination-
-H2A
-H2B
-H3
-H4

17
Q

What does central dogma mean

A

theory that states genetic information flows in one direction only
DNA-RNA-Protein

18
Q

what is Transcription

A

synthesis of mRNA from DNA
same language: nucleic acid

19
Q

translation

A

protein synthesis from mRNA
different language- nucleic acid to protein

20
Q

types of nucleic acid

A

deoxyribonucleic acid and ribonucleic acid

21
Q

differences B/W DNA and RNA

A

in DNA sugar is deoxyribose in RNA is ribose
deoxyribose lacks 1 oxygen

22
Q

2 types of nitrogenous bases

A

-pyrimidine 1 ring cytosine thymine uracil
-purines 2cyclic rings (adenine and guanine)

23
Q

what makes a nucleoside

A

sugar+ base bonded with beta glycosidic linkage

24
Q

what makes a nucleotide and draw

A

sugar, base and phosphate
ribonucleotide monomers make RNA polymer
deoxyribonucleotide monomers make DNA polymer

25
Q

differences B/W deoxyribose and ribose sugar

A

deoxyribose sugar doesnt have oxygen on carbon 2

26
Q

how is DNA formed

A

DNA is a double stranded helix as determined by watson and crick
when 2 mononucleotides join together a molecule of water is eliminated(condensation)
2 polynucleotide strands run antiparalel to each other
5’ - 3’ 3’>5’
bases form h bonds with each other twisting the DNA to form a helical structure

27
Q

what if importance of nucleotides rather than being just building blocks?

A

ATP is energy source of cells
ATP is made of nucleotide derivative

28
Q

complementary base pairing in DNA

A

occurs B/W complementary bases by H bonding
amount of purine= amount of pyrimidine
ratio of A:T and C:G is one to one

29
Q

how are grooves made?
2 types of grooves

A

in the double helix model bases are stacked on top of each other base stacking angles produces 2 grooves
major groove larger angle
minor groove smaller angle

30
Q

different forms of DNA

A
  1. A form- mostly when DNA is dehydrated or in crystaline formor in combination with RNA shorter, more compact, right handed helix
  2. B-form: most common- right handed
  3. z form- left handed helix forms as part of stress coiling or interaction with proteins
31
Q

triplet code, codon

A

each 3 bases form triplet code on DNA
1 codon= 1 AA Codon is on mRNA
Anticodon is on tRNA

32
Q

DNA vs RNA

A
  • ribose/ deoxyribose
  • RNA is single stranded helix
  • ATCG / AUCG
33
Q

Types of RNA

A
  • messanger RNA- transcript read from DNA
  • transfer RNA- translation carries AA to ribosome
    anticodon on tRNA pairs with codon on mRNA
  • ribosomal RNA - eukaryote RNA participate in protein synthesis
34
Q

tRNA structure and draw it

A

2D clover leaf structure
H bonds
single stranded folded into a clover shape
aa attachment site
anticodon

35
Q

what does non coding regions of RNA do

A

not all RNA codes for protein
remainin are non coding RNA
* rRNA and tRNA
* small nuclear RNA(snRNA) found in nucleus is part of splicing
* small nucleolar RNA(SnoRNA) involved IN methylation of rRNA
* small cytoplasmic RNA(scRNA) plays role in expression of some genes

36
Q
A