Molecular Genetics Flashcards

You may prefer our related Brainscape-certified flashcards:
1
Q

What are nucleic acids?

A

Macromolecules that make up DNA and RNA.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

Who discovered nucleic acids?

A

Friedrich Miescher in 1869

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

Who discovered that DNA and RNA were two groups of macromolecules?

A

Phoebus Levene in 1900

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

What were Phoebus Levene’s findings?

A

Levene discovered that DNA and RNA are polymers made up of monomers called nucleotides.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

How are nucleotides broken up?

A

Each monomer in D A and RNA contains a five-carbon sugar, a phosphate group, and a 5 nitrogen-containing base.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

How are the 5 nitrogen-bases divided?

A

Purines, which are double ringed structures including guanine(G) and adenine(A), and pyrimidines, which are single ringed structures including cytosine(C), thymine(T) and uracil(U).

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

Where are each nitrogen bases found?

A

Adenine, guanine, and cytosine are all found in both DNA and RNA, while thymine is found in DNA only and replaced by uracil which is found in DNA only.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

Who discovered genes?

A

Thomas Hunt Morgan in the 1900’s

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

How did Morgan discover genes?

A

He was doing experiments on fruit flys after Levene made his findings, he discovered that genes are found on chromosomes but could not figure out if DNA or proteins where the basis for genes.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

Who accidentally discorde how genes are passed down? How? Did this discovery prove is genes were passed through DNA or proteins?

A

Frederick Griffith in 1928 by experimenting on mice during a pneumonia outbreak. He discovered that dead pathogenic bacteria could pass on disease causing properties to living, non-pathogenic bacteria strains. This still did not prove whether genes were passed through DNA or proteins.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

What were Frederick Griffith’s findings called?

A

The transforming principle

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

How was it first proven that genes are found in nucleic acids?

A

Heat killed pathogenic bacteria was treated with proteases and nucleases. When proteases were only used, griffith’s process continued successfully. When nucleases were used, the transformation was not able to occur.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

How was it further proved that chromosomes are found in DNA?

A

Alfred Hershey and Martha Chase used bacteriophage viruses in two batches. One contained radioactive phosphorus tagged on the nucleic acids, and the other was tagged with radioactive sulfur on its protein coat. Once the bacteriophage injected its virus into the bacterial cells, only radioactive phosphorus was found inside the bacteria, proving that DNA is what contains the genes.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

What did Erwin Chargaff discover?

A

He discovered that not each of the 4 nucleotides present in DNA are found in equal amounts, and then the amount of A=T, and C=G.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

What are Chargaffs discoveries called?

A

Chargaff’s rule.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

What did Rosalind Franklin discover?

A

Franklin took c-ray picture of DNA to analyze its structure, and discovered that DNA is wrapped in a helical structure with 2 strands of a repeating pattern called the double helix. She also realized that the nitrogen bases are found within DNA while the phosphate and sugars are in the outside.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

What did Watson and Crick discover?

A

Using the same pictures that Rosalind Franklin took, they discovered that DNA contains a double helix structure, like a ladder. They took the credit for the discovery.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

What are complementary base pairs?

A

The handrails of the double helix which are always opposing. A is always opposite T, and G is always opposite C.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
19
Q

What does it mean that DNA is antiparrallel?

A

The strands run in opposite directions, where the 5’ and 3’ ends are opposite and flipped.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
20
Q

How do you find where the 5’ end is?

A

The phosphate group will point to it.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
21
Q

What is mitochondrial DNA?

A

mtDNA is found outside of the nucleus in the mitochondria.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
22
Q

What is unique about mtDNA?

A

It is genetically identical to the mother’s DNA, which means mtDNA dates back thousands of years.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
23
Q

How do scientists use mtDNA?

A

It is used to trace ancient lineage patterns, to discover where people originated from.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
24
Q

How did DNA get into the mitochondria?

A

DNA got into the mitochondria as it was once a free living bacteria, engulfed by the cell.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
25
Q

What is endosymbiosis?

A

When a free living organism is engulfed by cells which will gain a mutualistic relationship.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
26
Q

What are 3 major differences between DNA and RNA?

A

The sugar in RNA is ribose while in DNA it’s deoxyribose. RNA is single stranded while DNA is double stranded. RNA contains uracil instead of thymine.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
27
Q

What are the three main types of RNA?

A

Messenger mRNA, transfer tRNA, and ribosomal rRNA.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
28
Q

What is a genome?

A

The sum of all the DNA in an organisms cell.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
29
Q

What are genomes made up of?

A

Genes that code for specific traits .

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
30
Q

How is a genome discovered?

A

Using DNA sequencing, where each nucleotide is noted in precise sequences.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
31
Q

What is DNA replication?

A

The process DNA undergoes to make a copy of itself during the S-phase.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
32
Q

What does semi-conservatively mean?

A

The new DNA molecule contains one strand from its parent and one strand that is newly formed called the complementary daughter strand.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
33
Q

What are the 3 stages of DNA replication?

A

Initiation, elongation, termination.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
34
Q

How does initiation begin in DNA replication?

A

The DNA strands unravel in more than one spot at replication origins due to DNA helicase. This enzyme opens the DNA at 2 y-shaped ends called replication forks of the replication bubble; the unwound area.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
35
Q

What is the process of elongation in DNA replication?

A

An RNA primer is placed as a starting point for daughter strands to be built. The primer is later by an enzyme called primase. A second enzyme called DNA polymerase III places itself next to the RNA primer and begins the contradiction of the daughter strand, 1 nucleotide at a time. After copying is complete, DNA polymerase I removes any RNA primers and checks the code of the daughter strands to ensure no mistakes were made, and fixes any that occurred. The gaps created by RNA primers are sealed using the enzyme ligase.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
36
Q

In which direction does DNA replication occur?

A

In the 5’ to 3’ direction only along a forming daughter strand.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
37
Q

What is a leading strand?

A

The daughter strand that is continuously built as the DNA double helix unravels and only requires one RNA primer.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
38
Q

What is a lagging strand?

A

A daughter strand created in fragments as it replicates in the opposite direction of DNA unraveling. It requires multiple RNA primers .

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
39
Q

What is an Okazaki fragment?

A

The segments of RNA created in the lagging strand.

40
Q

What is the termination step in DNA replication?

A

The completed DNA strands reform the double helix structures automatically, and there is now 2 completed DNA molecules formed which are sister chromatids.

41
Q

What determines how proteins are made?

A

The genetic code of the DNA and the shape of the protein determines its function.

42
Q

What is protein synthesis?

A

The process of genes passing on genetic information to RNA which assembles a group of amino acids to produce proteins.

43
Q

What are 3 characteristics of DNA?

A

DNA is redundant, universal, and continuous.

44
Q

How does protein synthesis occur?

A

Gene expression though transcription and translation.

45
Q

What does it mean that DNA is redundant?

A

Many codes of nucleotides can code for the same amino acid.

46
Q

What does it mean for DNA to be continuous?

A

It is read as a series with no overlap. A slight shift can make drastic changes to the sequence.

47
Q

What does it mean that DNA is universal?

A

Almost all living organisms are built using the same 4 nucleotides used to build the same codes for amino acids.

48
Q

What is a codon?

A

A group of three nucleotides that codes for an amino acid.

49
Q

What is a transcription unit?

A

A chain of genes which code for entire proteins.

50
Q

Why is DNA not sent out of the nucleus to code for amino acids? What is sent out instead?

A

To prevent it from being damaged outside of the nucleus. Instead, mRNA is sent out of the nucleus, an exact complementary strand.

51
Q

What is the process of transcription?

A

DNA unzips using helicase. Onde strand of DNA is used to create mRNA and is called the sense strand. The DNA is replicated to mRNA using RNA polymerase , which begins building the RNA strand once it detects an initiator codon, promoting building in the 5’ to 3’ direction. The strand continues to build until a terminator codon is read, where RNA detaches from the sense strand and the double helix is automatically restored.

52
Q

What is a sense strand?

A

The strand of DNA used to create the mRNA strand.

53
Q

What is an anti-sense strand?

A

The strand of DNA not used to copy a mRNA strand.

54
Q

How is the sense strand determined?

A

It depends on the genes required to produce the correct protein that is required.

55
Q

How is amino acid codes detected?

A

Through mRNA ALWAYS! Never the original DNA or tRNA.

56
Q

What does the process of translation in protein synthesis consist of?

A

A polypeptide chain building through the guidance of codon sequences on mRNA that has left the nucleus.

57
Q

What is tRNA?

A

A transfer RNA which is folded into a clover shape, the bottom line containing anticodons; 3 nucleotide sequences that match up with sequences or mRNA. On the opposite end of tRNA is a binding site for amino acids that correspond the mRNA codons.

58
Q

What is rRNA?

A

Ribosomal RNA, which is divided into a large and small subunit connecting mRNA and tRNA. The rRNA allows 3 nucleotides to pass through and be read at a time to code for amino acids.

59
Q

What are the three stages of translation in protein synthesis?

A

Initiation, elongation, and termination.

60
Q

What is the initiation process for protein synthesis?

A

rRNA attaches to the mRNA that has left the nucleus, and begins reading codons on mRNA until it reaches an initiator codon of AUG. This is where the translation begins as a tRNA molecule drops into the ribosome attaching the the mRNA.

61
Q

What is the process of elongation?

A

The first tRNA molecule dropped into the rRNA produces the corresponding amino acid to the mRNA codon. After the first tRNA molecule attaches, a second molecule attaches next to it, matching up its anticodon. The first amino acid created is passed to the second tRNA’s amino acid and the initial tRNA detached from the mRNA strand. The ribosome continues to move forward, exposing more codons and building more amino acid chains.

62
Q

What is the process of termination?

A

The ribosomes reach a terminator codon , where a release factor binds to the terminator codon allowing the polypeptide chain to release from the tRNA.

63
Q

That determines the shape of amino acids?

A

The assembly results in folds which determine the structural shapes.

64
Q

How do viruses hijack organelles?

A

They transcribe and translate their own DNA into the virus.

65
Q

What is mRNA?

A

The copy of DNA that will be sent into the cytoplasm, containing nucleotides grouped into codons.

66
Q

What is rRNA?

A

The primary component of ribosomes. They read the codons and allow tRNA to be attached to the mRNA.

67
Q

What is tRNA?

A

A molecule which contains the anticodon that correlates to the mRNA which will transfer the amino acids to a polypeptide chain.

68
Q

What is a mutation?

A

A permanent change in an organisms genetic material.

69
Q

What are the two kinds of mutations?

A

Somatic cell mutations and germ-line mutations.

70
Q

What are somatic cell mutations?

A

Mutations that occur in body cells and are not inherited by offspring.

71
Q

What are germ-line mutations?

A

Mutations occurring in reproductive cells that are passed to offspring.

72
Q

What are mutagens?

A

Dangerous Substances exposed to DNA which cause mutations.

73
Q

What are physical mutagens? Examples?

A

Physical mutagens cause physical changes in the structure of DNA. This can be caused by x-rays, gamma rays, viruses, and more which cause gene disruption or cancers by ripping and tearing the DNA to damage it resulting in altered or missing proteins.

74
Q

What are chemical mutagens?

A

Mutagens which chemically react to DNA. These are often carcinogens or cancer causing agents. They can occur due to a lack of nucleotides or due to some antibiotics.

75
Q

What are the types of mutations?

A

Chromosomal mutations and point mutations.

76
Q

What are chromosomal mutations?

A

They visibly affect the structure of chromosomes in a karyotype. It occurs due to nondisjunction.

77
Q

What kind of chromosomal mutation is down syndrome?

A

A trisomy in chromosome 21.

78
Q

What kind of chromosomal mutation is Edward’s syndrome?

A

A trisomy in chromosome 18.

79
Q

What kind of chromosomal mutation is patau syndrome?

A

A trisomy in chromosome 13.

80
Q

What kind of chromosomal mutation is turner syndrome?

A

A monopsony in chromosome x.

81
Q

What are point mutations?

A

Mutations which change the genetic code or an organism.

82
Q

What are the 6 types of point mutations?

A

Substitution, insertion, deletion, translocation, inversion, and duplication.

83
Q

What is a frame-shift mutation?

A

A mutation caused by an entire gene shifting over, causing it to be read wrong. This can change amino acid production.

84
Q

What is a silent or same-sense mutation?

A

A mutation that has no effect on the organism, meaning the protein is essentially the same. Occurs through substitution.

85
Q

What is an mis-sense mutation?

A

A mutation resulting in slightly altered proteins which are still functional. Occurs through inversion, translocation, and substitution.

86
Q

What is a non-sense mutation?

A

A mutation that results in a completely new protein. This occurs through deletion, insertion, and duplication, or frame shift mutations.

87
Q

What is sickle cell anemia?

A

A genetic disorder resulting from a substitution mutation of a single thymine being changed to an adenine. This results in misshapen erythrocytes.

88
Q

What is biotechnology?

A

Technology based off of biological systems.

89
Q

What is genetic engineering used for?

A

Used to alter genes and DNA.

90
Q

How does the genetic engineering process start?

A

DNA must be first cut to get rid of unwanted gene codes. This occurs through restriction enzymes or CRISPR/Cas 9.

91
Q

What are restriction enzymes?

A

Enzymes which work as a défense mechanism for bacteria but work randomly in the gene sequencing. Meaning it is not accurate in gene engineering. These are also used in GMOs.

92
Q

How are GMOs made?

A

Using restriction enzymes where different sections of DNA from different organisms are combined.

93
Q

What is CRISPR/Cas 9? How does it work?

A

An accurate method of cutting DNA using sophisticated bacterial proteins are able to recognize a specific code in DNA and destroy it. This method is 100% accurate.

94
Q

What are DNA microarrays?

A

A way of finding codes in DNA to know where to cut using microchips with nucleic acid sequences which bind to sequences of mRNA. This is synthesized to make cDNA or copy DNA. This binds to a microarray allowing scientists to find the location of the required genome.

95
Q

How is DNA copied in gene editing?

A

Scientists use a polymerase chain reaction. This works an uncontrolled reaction through repeated heating of fragments so that large quantities of the DNA can be copied quickly.