Module 1 Structure, function & defence Flashcards

1
Q

Define the term pharmacodynamics

A

A drug’s mechanism of action

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2
Q

Name the four broad structural types of receptors.

A

Ligand-gated ion channel, G protein coupled (or 7 transmembrane), tyrosine kinase and cytoplasmic/nuclear.

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3
Q

What are the two broad subtypes of receptors for acetylcholine and their different topology

A

Nicotinic - Ion channel
Muscarinic 7TD receptor with intra and extracellular domains

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4
Q

By what characteristics can drugs be classified by?

A

therapeutic use, mode of action, chemical structure

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5
Q

Name two diseases that stem from mutations to one amino acid and how they come about.

A

Cystic Fibrosis - CTFR ion channel structure is changed which controls Na and Cl movement causing excess mucous to gather in the airways
Sickle Cell disease - Point mutation changes the shape of the erythrocytes

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6
Q

What is desensitization and tolerance?

A

Prolonged treatment can reduce the efficacy of a drug due to receptor desensitisation and can eventually lead to total tolerance.

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7
Q

Describe Y linked inheritance and give an example.

A

Male only inheritance due to only males having X Y chromosomes; webbing of the 2nd and 3rd toes.

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8
Q

Are male or females affected predominantly by X linked recessive? Give an example of a X linked recessive disease.

A

Males are, as they only require 1 copy of the gene to express the phenotype. Haemophilia - defective factor VIII gene involved in clotting

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9
Q

Describe Mendelian autosomal dominant, with an example.

A

Disease is expressed with heterozygous and homozygous patients, for example familial hypocholesteraemia - defective LDL receptor gene on chromosome 19.

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10
Q

Describe Mendelian autosomal recessive, with an example.

A

Require two copies of the defective gene to express the condition, for example cystic fibrosis - CPTR gene on C7. Can be a carrier for autosomal recessive conditions

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11
Q

Describe mitochondrial inheritance

A

Circular DNA that is solely maternal - paternal mitochondria excluded during fertilisation. Conditions such as neuropathy. Can be passed on to male and female offspring but only females can pass on the condition.

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12
Q

Inbreeding/consanguinity causes ….., for example……

A

A higher rate of genetic defects, such as ataxia telangiectasia - coordination issues with movement and speech, enlarged vessels in the eye and an increase in alpha fetoprotein in the blood

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13
Q

What causes down syndrome?

A

An extra Chromosome 21.

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14
Q

Define Autocrine, Paracrine, Endocrine, Neurocrine and juxtracrine, with examples.

A

Autocrine signalling acts on the signalling cell itself - IL-4 in monocytes.
Paracrine signalling acts on nearby cells - Thromboxin from platelets to further clotting cells.
Endocrine signalling uses the circulatory system - hormones.
Neurocrine is nerve signalling.
Juxtacrine is physical contact, such as leukocytes using adhesion molecules on EC.

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15
Q

What are the four basic tissue types in the body, and give an example of how they are arranged in tissues.

A

Connective tissue, epithelial tissue, muscle tissue, and nervous tissue. E.g. GI Tract layers involves epithelium around the lumen, multiple layers of differing connective tissue, and muscle; all arranged in a tubular formation.

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16
Q

Name the 3 simple forms of epithelia, their structure (nuclei included) and its function. What does simple mean in this sense?

A

Simple means monolayer structure.

Squamous - Flattened nuclei. Facilitates passive diffusion of gases or fluids. Large protective sheets (mesothelium) lining the body cavities.

Cuboidal - Central nuclei. Usually found lining small ducts and tubules. May have excretory or absorptive functions.

Columnar - Basal stretched nuclei. Most frequently associated with absorption and secretion. May have microvilli on apical surface for increased surface area. Stratified columnar epithelium: rarer several-layered variant e.g. in urethra, anus

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17
Q

What is meant by pseudostratified columnar ciliated and where is it exclusively found?

A

Variant of simple columnar found almost exclusively in the respiratory tract, sometimes referred to as respiratory epithelium.
1 layer appearing as multiple layers; all are attached to the basement membrane.

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18
Q

Describe Stratified squamous keratinizing and non-keratinizing epithelium, and why its structure fits its function.

A

Non-keratinizing - Lots of cell layers: cuboidal in shape near basement membrane, squamous at surface.
Protective function: well adapted to withstand stress and mechanical abrasion
Found at openings to the outside world.

Keratinizing - Adapted to withstand mechanical and chemical damage as well as water loss – epidermis of skin. Keratin: intermediate filament that builds up in the cells

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19
Q

What is urothelium?

A

Only found in ureter and urinary bladder
Adapted to withstand stretch of bladder wall and the toxicity of urine
Umbrella cells: surface cells that can stretch extensively

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20
Q

Name the 5 functions the basement membrane can have

A

Adhesion
Partition
Barrier/permeability
Anchorage for cell organisation
Controlling growth and differentiation

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21
Q

What is the composition of the basement membrane?

A

Composed mainly of type IV collagen, glycoproteins (laminin secreted by epithelial cells, fibronectin from fibroblasts) and glycosaminoglycans (GAGs)

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22
Q

What are the key structural components on the cytoskeleton?

A

Microfilaments: thin strands of the protein actin that determine the shape of the cell membrane e.g. microvilli

Intermediate filaments: thicker strands of protein that provide mechanical strength e.g. keratin in hair

Microtubules: much larger, determine the movement of cell organelles and intracellular vesicles
Made of tubulin
Grow from centrosome and extend to cell periphery, form mitotic spindle for cell division
Form the core of cilia

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23
Q

What are the four cell cell junctions?

A

Tight junctions
Membranes of adjacent cells are sealed together at points to prevent transport of substances between the cells.

Intermediate junctions (adhering junctions)
Connect actin microfilaments in cytoskeletons of adjacent cells to help maintain integrity of epithelium

Desmosomes
Connect intermediate filaments (e.g. keratin) of adjacent cells to maintain integrity of epithelium.
Hemidesmosomes attach to basement membrane

Gap junctions
Communication between adjacent cells e.g. passage of ions, small molecules

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24
Q

How does the structure of Exocrine glands differ to Endocrine?

A

Exocrine glands: hollow duct forms to the epithelial layer, allowing release of secretions e.g. sweat glands, liver

Endocrine glands: connection to epithelium lost, blood vessels form around the secretory portion to allow for release of secretions e.g. pancreatic islets

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25
Exocrine secretion happens in 3 main ways? List them
Merocrine (eccrine): cell vesicles release product via exocytosis e.g. sweat glands Apocrine: vesicles bud off cell with product Holocrine: entire cell ruptures e.g. sebaceous glands
26
Name 2 autoimmune conditions caused by cell junction defects.
Pemphigus vulgaris: antibodies destroy desmosomes, leading to blisters affecting skin and mucous membranes (e.g. mouth) Bullous pemphigoid: antibodies attack hemidesmosomes, leading to raised skin rash and large fluid-filled blisters where epidermis and dermis have separated
27
Connective tissue can have 7 functions. List them?
Binding, packing and support Skeletal framework Protection Insulation Transportation / nourishment Immunological defence Repair (scar tissue)
28
Name the four types of connective tissue cells, and their common name where necessary.
Fibroblasts: primary cell types producing ECM in connective tissue Adipocytes: storage and metabolism of fat, protecting internal organs Chondroblasts and chondrocytes (cartilage) Osteoblasts, osteocytes, osteoclasts (bone)
29
What are Ehlers Danlos syndromes?
Reduced tensile strength from collagen disorders causes tissue laxity, joint hyper mobility and susceptibility to injury
30
There are 3 main types of ordinary connective tissue. Name them and describe their structure/function.
Loose, areolar - Widely distributed below epithelia Forms the lamina propria of a mucosa Surrounds capillaries Dense irregular (fibrous) - Found in dermis, submucosa of digestive tract, fibrous capsules surrounding organs etc. Predominantly collagen fibres, densely packed and irregularly arranged Dense regular (fibrous) - Predominantly collagen fibres running in parallel. Found in: Ligaments (bone to bone), Tendons (muscle to bone), Aponeuroses (modified flattened tendons found on abdomen and back)
31
What does a peripheral nerve consist of?
Bundles of nerve fibres called fascicles Dense connective tissue covering the nerve fibres and fascicles, binding them together (endoneurium, perineurium and epineurium) Small blood vessels (vasa nervorum) supplying the nerve tissue
32
Describe the layers of the GI tract.
the mucosa (epithelium, lamina propria, and muscular mucosae), the submucosa, the muscularis propria (inner circular muscle layer, intermuscular space, and outer longitudinal muscle layer), and the serosa.
33
Describe ion movements involved in a sodium calcium exchanger.
Na+ is pumped out in exchange for K+, Na+ comes back across the membrane down its conc. gradient, Ca2+ is exchanged for this Na+ to keep intracellular levels extremely low.
34
What are the fat soluble vitamins?
A, D, E and K (A Dairy Eater Knows) Dairy is fatty
35
What are the water soluble vitamins?
B complex, C
36
Name the essential compounds, that are not energy yielding.
Vitamins, Minerals, Essential fatty acids, Essential amino acids, Ions and cholesterol etc.
37
There are 6 electrolytes. Name them
K, Na, Cl, Ca, Mg, P
38
What are the essential fatty acids? What are they needed for?
Omega 3, Omega 6. Needed for eicosanoids (a class of non-protein bioactive molecule) Examples of eicosanoids - prostaglandins, thromboxanes, leukotrienes These signal molecular mediated inflammation, pain and also modulate cell activities including cancer cell production
39
What is vitamin k key for?
It is a blood clotting factor
40
B6, 12, 7, 9 and 5 are ...... vitamins
Group transfer agent
41
Vitamins A and D are precursors for?....
Hormones
42
What are the three psychosocial theories for life development
Psychoanalytical, Cognitive and Sociocultural
43
What are the four attachment stages in child development?
Asocial, indiscriminate, specific, multiple 6 weeks 7 months 9 months
44
What is attachment, in terms of child development?
Deep and enduring emotional bond that connects one person to another across time and space
45
Child development - compare secure attachment to insecure and resistant.
Secure = A child can be comforted back to normal after separation. Insecure/Resistant = Cannot be comforted or shows no anxiety at all
46
What are the 3 main physical checks are done for children after birth and when?
Vision - Within 72 hours of birth Between 6-8 weeks old At 1 year or between 2-2.5 years At 4-5 years (pre-school) Hearing - Within a few weeks of birth 9 months - 2.5 years: parental concerns At 4 - 5 years (pre-school) Walking - Infants walk by 13 months of age Not walking by 18 months of age is a red flag. Cases such as down syndrome differ from this - Bottom shuffling ma be utilised by the baby for movement
47
What is a condition called if it has an unknown cause?
Idiopathic
48
What is a latrogenic condition?
A condition caused by medical personnel or procedures (treatment/diagnostic test) or that develops through exposure to the environment of a health care facility.
49
Contrast hypertrophy and hyperplasia.
Hypertrophy Increase in the size of cells No new cells - just bigger Can be physiological or pathological Cells that don’t divide e.g. cardiac and skeletal muscle Examples: hypertension - cardiac muscle, exercise Hyperplasia Increase in the number of cells Cells that can divide; For example: breast development at puberty, liver regeneration after resection, wound healing E.g. psoriasis leads to thickened skin
50
Name an example in which hyperplasia and hypertrophy occur simultaneously.
Uterine enlargement during pregnancy; Smooth muscle.
51
What is the shrinkage of cell size called due to a loss of cell substance? example?
Atrophy e.g. immobilisation/ageing limb muscle
52
What is involution? example?
Reduction in number of cells - apoptosis. Myometrium of uterus post partum
53
What is Metaplasia and what can it lead to?
Change in type of cell Reprogramming of stem cells Survival mechanism in response to injury e.g. Smoking Specialised function is lost Can predispose to neoplasia
54
What is neoplasia?
Not an adaptive response Permanent alteration of normal cellular growth pattern Abnormal proliferation in the absence/removal of stimulus Do not respond to normal signals controlling growth Dysregulated control mechanisms lead to uncontrolled proliferation
55
What is the normal cell:plasma ratio in blood?
cells 45%; plasma 55%
56
What is serum?
Plasma with clotting factors removed
57
Name 2 components of blood plasma.
Albumin - Colloid osmotic pressure (oncotic pressure) Transporter Produced in liver Hypoalbuminemia (low) Hyperalbuminemia (high) Marker of inflammation Fibrinogen - Soluble precursor to Fibrin - clotting factor
58
5 types of Leucocytes and the 2 categories they fall within? What are their functions?
Granulocytes Neutrophils Basophils Eosinophils Mononuclear leucocytes Lymphocytes Monocytes Neutrophil: leave circulatory system in response to tissue damage. Remove damaged tissue and kill and phagocytose invading organisms. Increased in bacterial infection. Eosinophil: Phagocytic (anti-body labelled material), elevated in allergic reactions and in parasitic infection Basophil: Release heparin and histamine that promote inflammation. Lymphocyte: immunologic response (antibodies). Increased in viral infections (infectious mononucleosis) Monocyte: Phagocytosis. Rarely elevated. In tissue is called a macrophage
59
There are 6 blood analysis measurements. Name them.
Haematocrit (HCT): The fraction of the blood composed of red blood cells Erythrocyte sedimentation rate (ESR): The rate at which the red blood cells settle to the bottom of the test tube. Haemoglobin (Hb): Total amount of haemoglobin in the blood Mean cell haemoglobin (MCH): calculated using Hb and RBC Mean cell volume (MCV): average volume of a red blood cell Mean cell haemoglobin concentration (MCHC): average concentration of Hb in a given volume of packed red blood cells
60
Discuss Mean Cell Haemoglobin ranges.
MCH varies in direct linear relationship with the MCV. Cells with less volume contain less Hb and vice versa MCH increase: B12 deficiency, folic acid deficiency, haemolytic anaemia MCH decrease: iron deficiency anaemia, thalassemia
61
What is the suffix for MCV ranges?
-cytic
62
What is the suffix for MCHC?
-chromic
63
Name the 3 main types of anaemia and how they are caused.
microcytic anaemia - Iron deficiency alpha thalassaemia , beta thalassaemia - Haemoglobinopathies macrocytic anaemia - B12 / folate deficiency / pernicious anaemia
64
What are the 5 cardinal signs of inflammation
Rubor, Calor, Tumor, Dolor, Functio laesa
65
Describe the vascular events that occur during the onset of acute inflammation and what it allows.
Local blood vessels briefly contract and then dilate to slow the flow of blood to the area; mediated by mast cells (histamine) and endothelial cells (nitric oxide) Vascular permeability is increased allowing protein –rich plasma to leave the vessels and enter the tissue: the inflammatory exudate The slowing of flow allows neutrophils to come into contact with the (activated) endothelium
66
What does inflammatory exudate contain?
Plasma and proteins (lots of fibrinogen) Neutrophils and some macrophages and lymphocytes
67
Name the cells and proteins involved in inflammation.
Main cell is neutrophils but also ECs, macrophages, lymphocytes, platelets, fibroblasts, complement system.
68
Explain neutrophil extravasation
Rolling - Selectins expressed on activated EC surface. Adhesion - Integrins expressed on neutrophil. Shape change - CD11 and 18 on EC bind Extravasation - PECAM1 on both cells facilitates the trans-endothelial emigration.
69
Name the 4 enzyme cascades of plasma mediators
Coagulation system (activated Hageman factor - coagulation factor XII) converts fibrinogen into fibrin, also activates the kinin & fibrinolytic systems Kinin system e.g. bradykinin – mediates pain Fibrinolytic system e.g. plasmin – affects fibrin Complement
70
Name the mediators of the following inflammatory responses: Vasodilatation
Vasodilatation - Histamine, prostaglandins, nitric oxide, bradykinin, PAF
71
Name the mediators of the following inflammatory responses: Increased vascular permeability
Increased permeability -Histamine (transient), C3a, C5a, bradykinin, leukotrienes, PAF, nitric oxide (longer acting)
72
Name the mediators of the following inflammatory responses: Neutrophil adhesion
Neutrophil adhesion - Adhesion molecules on endothelium are up-regulated by IL-1, IL-8, TNFα, PAF, LeukotrieneB4, C5a, chemokines
73
Name the mediators of the following inflammatory responses: Neutrophil chemotaxis
Neutrophil chemotaxis - C5a, Leukotriene B4, bacterial components, chemokines IL-8
74
Name the mediators of the following inflammatory responses: Fever
IL-1, TNF, prostaglandins
75
Name the mediators of the following inflammatory responses: Pain
Prostaglandins, bradykinin
76
Name the mediators of the following inflammatory responses: Tissue necrosis
Neutrophil lysosomal granule contents, Free radicals generated by neutrophils
77
What mediators of inflammation are preformed in secretory granules and what cells produce them.
Histamine and serotonin - Mast cells, basophils and platelets and in platelets respectfully.
78
Where are the following inflammatory mediators produced? • Histamine • Serotonin • Prostaglandins • Leukotrienes • Platelet-activating factor • Reactive oxygen species • Nitric oxide • Cytokines (e.g. TNF, IL-1) • Chemokines
• Histamine - Mast cells, basophils, platelets • Serotonin - platelets • Prostaglandins - Mast cells, leucocytes • Leukotrienes - Mast cells, leucocytes • Platelet-activating factor - Leucocytes, ECs • Reactive oxygen species - Leucocytes • Nitric oxide - Endothelium, macrophages • Cytokines (e.g. TNF, IL-1) - Macrophages, lymphocytes, endothelial cells, mast cells • Chemokines - Leucocytes, activated macrophages
79
Most inflammatory mediators are cell derived, which aspects are plasma protein derived?
Complement and Factor XII activation (kinin and coagulation system)
80
What are the main 4 acute phase proteins? (inflammation) and what are they responsible for?
Fibrinogen, C reactive protein (CRP), Serum amyloid A (SAA) Ferritin Responsible for systemic effects of inflammation
81
Name 2 systemic effects of inflammation.
Mediated by cytokines (mainly from activated macrophages) act on the brain to increase temperature (fever), reduce appetite and increase fatigue. act on the bone marrow to increase the production of neutrophils (particularly in bacterial infection)
82
Contrast tissue resolution and repair
Tissue resolution –restitution of normal tissue structure and function. If damage occurred to just the parenchyma. Repair by fibrosis – scar formation via granulation tissue formation and organisation. Occurs when damage occurs to the stroma as well.
83
Name the 4 possible outcomes of acute inflammation
Tissue resolution Repair by fibrosis Abscess formation Chronic inflammation
84
Tissue repair can depend on the regenerative capability of the damaged cells. What are the 3 types of regeneration ability/
Labile – replicate throughout life; skin and GI epithelium Stable – Non-dividing in normal circumstances but capable of regeneration – liver/kidney parenchyma Permanent – non-dividing cells; nerves, cardiac/skeletal muscle
85
Name the 3 stages of healing by fibrosis.
Granulation tissue Macrophages, fibroblasts and new blood vessels (angiogenesis) Fibrosis and scar formation - Fibroblasts lay down matrix. Scar is formed as amount of collagen laid down is increased to strengthen the tissue Remodelling Over time the number of vessels is reduced and a pale scar remains
86
Describe the proliferative phase of tissue repair (Skin)
Granulation tissue - Building tissue to fill the wound Fibroblasts secrete: Matrix components, Growth factors to stimulate angiogenesis Epithelial cells re-grow over the wound
87
Describe wound contraction and remodelling.
Due to the action of fibroblasts laying down collagen and collagenases breaking down collagen to orientate for maximal tensile strength. Wound contraction Decreased vascularity
88
What are the stages of tissue repair in skin?
Proliferation > wound contraction > remodelling
89
Name a model disease regarding chronic inflammation.
Gastric Ulcers - Damage and repair occurring simultaneously
90
What is innate immunity
General non specific immunity that does not evolve. e.g. PAMP recognition
91
What are the primary lymphatic tissues?
Bone marrow and the Thymus Haematopoiesis and T cell maturation respectively
92
What are the three pathways that activate the complement system?
Classical C1q binds to the Fc regions of these antibodies that are bound to microbial antigens. This activates C1r and C1s that are associated with C1q, leading to the conversion of C4 and C2. The fragments C4b and C2a combine to form C4b2a, which has C3 convertase activity. Lectin When mannose binding lectin interacts with microbes, it activates MBL-associated serine proteases that convert C4 and C2, generating C4b2a, aka C3 convertase.  Alternate Circulating C3b fragments, from the other pathways or spontaneous cleavage of C3, can be stabilised on microbial surfaces with another complement protein to form a version of C3 convertase
93
Name the 5 antibody isotypes and their abilities.
M - first to be expressed, activates complement, pentamer interactions A - 2nd most abundant found in secretions such as saliva and breast milk, can act as a homodimer. D - Found on lymphocytes G - Most abundant, transplacental E - On basophils, mast cells - involved in allergy response.
94
Compare and contrast MHCI and II
Class I - a1, 2, 3 and B2. CD8+ interaction, on every nucleated cell, endogenous antigens. Class II - a1, 2, B1, 2, CD4+ interaction, on APCs, exogenous antigens. Both formed in the endoplasmic reticulum.
95
Name the major components of the lymphatic system.
Thymus, Lymph Nodes, Spleen, Mucosa associated lymphoid tissue, Specialised fixed phagocytes.
96
Capillaries can be..., .... or ....
Continuous – no gaps in wall or basement membrane Fenestrated - gaps in wall but basement membrane still continuous e.g. small intestine, endocrine organs, kidney Sinusoidal (gaps in both wall and basement membrane e.g. spleen, liver, bone marrow)
97
Name the main lymph nodes and where to locate them.
Cervical nodes - along internal jugular vein in the neck Pericranial- base of head Axillary nodes - in axilla- armpits Tracheal nodes Deep nodes - aorta, celiac trunk and mesenteric arteries Inguinal - pelvic area Femoral - inside leg in crotch
98
Describe the draining of lymph into the venous circulation
Lymph from right side of head & neck + right upper limb and right thorax will drain into right lymphatic duct and into the junction between the right subclavian vein and right internal jugular vein – right venous angle Lymph from all other body regions drains into thoracic duct and then into the junction between the left subclavian vein and left internal jugular vein – left venous angle Lymph from lower half of body initially drains into cisterna chyli
99
Describe lymph node structure and cell organisation.
Small bean-shaped structures that act as filters to trap and phagocytose particulate matter in the lymph. Macrophages in subcapsular sinus and medulla Clusters of lymphocytes e.g. B cells in lymphoid follicles, T cells in paracortical area
100
Why are lymph nodes susceptible to secondary tumours?
Flow through lymph nodes is slow, so metastatic cells e.g. from a primary tumour in the breast may lodge in lymph nodes and grow as secondary tumours Lymph node removal + examination e.g. to assess tumour stage (spread of the cancer
101
Cancers will spread first to their nearest nodes, name some examples.
Testicular cancer = lateral aortic nodes Breast cancer = axillary nodes (multiple groups) Genital herpes = superficial inguinal nodes Bronchitis = cervical lymph nodes
102
What tests could you order to check for inflammation?
Erythrocyte sedimentation rate (ESR) • This is a separately ordered test from a FBC • It is a haematological test • This is a non-specific test for inflammation i.e. it will tell you something is going on but not the diagnosis. However, it can be helpful alongside the history, exam and the results of other tests • Baseline values tend to be higher in females and it rises with age Sample normal test ESR = 2 mm/h (< 12.0) C-reactive protein (CRP) • CRP is similar test to ESR though it measures only one acute phase protein rather than several in an ESR making it a more specific test • Again, it is a test for the presence of inflammation and changes more rapidly than the ESR • It may help diagnose or monitor activity in conditions such as polymyalgia rheumatica, cranial arteritis, rheumatoid arthritis and Crohn’s disease Sample normal test Serum CRP level = <0.5 mg/L (<5.0)
103
There are 7 main blood tests that can be undertaken. Name them.
Full blood count, Erythrocyte sedimentation rate, C reactive protein, Urea and Electrolytes, Liver function, Thyroid function, Gycosylated haemoglobin.
104
What are Erikson's 8 stages of psychosocial development?
Trust vs mistrust Autonomy vs shame and doubt initiative vs guilt industry vs inferiority identity vs role confusion intimacy vs isolation generativity vs stagnation integrity vs despair
105
What are the 3 "health sectors" in relation to psychosocial opinions
Professional , folk and popular
106
The skin has 5 main functions, name them
Protection from external damage: UV light, chemical, thermal and mechanical injury and resistance to sheer stress: thick skin Barrier: waterproof and a barrier to bacteria Sensation: touch, pressure, pain and temperature Metabolic: Synthesises vitamin D3, subcutaneous fat is a major energy store Thermoregulation: Insulation, heat loss by sweat evaporation and vasodilation
107
Describe the main layers of the skin from bottom to top; and the main structures within them.
Hypodermis/subcutis: Adipose tissue and main blood supply. Dermis: Dense irregular connective tissue: fibroblasts, collagen I, elastin, blood, nerves and receptors. Divided into papillary and reticular dermis Epidermis: Stratified squamous epithelium (keratinised): keratinocytes
108
Layers of the epidermis; bottom to top
Stratum basale: lowest layer of cells, separated from the dermis by a basement membrane to which they are attached cuboidal/low columnar shape attached to the basement membrane by hemidesmosomes and to adjacent basal cell by desmosomes a layer where mitosis is often observed and is the constant supply of keratinocytes as keratinocytes divide, new daughter cells migrate upwards forming the stratum spinosum Stratum spinosum: Contains so-called prickle cells which are large and polyhedral but flatten towards the junction with the next layer Cytoplasmic projections containing intracellular fibrils (Tonofibrils) that connect to other cells via desmosomes that look like prickles Lamellar bodies - secreted from keratinocytes, resulting in the formation of an impermeable, lipid-containing membrane that serves as a water barrier and is required for correct skin barrier function.  Stratum Granulosum: contain many keratohyalin granules and tonofibrils These are combined together to form the mature keratin complex Stratum lucidum: appears clear by light microscope, hence name – sometimes not visible A layer of dead cells between the granulosum and corneum Lysosomal enzymes in the cell burst and break down the cell organelles and nuclei Stratum corneum: a layer of flattened, dead cells containing only mature keratin Dying cells release a hydrophobic glyophopholipid which renders the skin surface waterproof These cells constantly need replacing and this comes from the lower layers – turnover depends on the skin site ie higher trauma, faster turnover
109
What are the layers of the basement membrane zone
Lamina lucida –contains adherence proteins to cells above Lamina densa - principally type IV collagen Anchoring fibrils – arrays of type VII collagen – extend into papillary dermis
110
Name a defect caused by the separation of the epidermis from the dermis with minimal shearing forces
Epidermolysis bullosa
111
Epidermolysis bullosa can occur at three different locations in the basement membrane, name them and their consequences.
EB simplex: defective cytoskeleton - Good healing Junctional EB: defective hemidesmosomes - fatal Dystrophic EB: defective BM collagen - scarring
112
There are 4 main skin cell types...
Keratinocytes: 95% of cells Stratified squamous keratinising epithelial cells Produce keratin – structural protein Melanocytes Pigment synthesising cells responsible for skin and hair colour Neural crest derived cells lying in the stratum basale Melanosomes in cytoplasm contain melanin and are passed to keratinocytes – scattering of UV light Langerhans cells: All layers and upper dermis-prominent in spinosum. Bone marrow derived. Dendritic, antigen presenting cells-migrate to regional lymph nodes and communicate with the immune system. Merkel cells: Clear cells in SB. Plentiful in touch areas. Connected to keratinocytes and afferent nerves. Neuroendocrine function
113
What are the 2 layers of the dermis, top to bottom
Papillary dermis: a narrow zone just below BMZ of epidermis. conical papillae (rete ridges), richly vascularised (capillaries), lymph and nerve Reticular: Contains most of the dermal collagen. Horizontal collagen and elastin fibres Contains hair and gland structures
114
What are rete ridges?
Downgrowths from the epidermis Found where there are more shearing forces e.g. palms of hands and soles of feet
115
Describe hair follicles
Produce hair shafts (keratin) for thermoregulation and display. Growth from a hair bulb at the base Arrector pili muscle Sebaceous glands Majority associated with hair follicles. Secrete lipid mixture: sebum into hair follicle (waterproofing)
116
Describe the two types of sweat gland
Eccrine: dermal-subcutaneous junction of all skin, produce sweat. Ducts open onto skin surface (thermoregulation) Apocrine: Localised (axilla/groin) scent production. Open into hair follicles above sebaceous duct. Functional at puberty
117
Name and describe 3 cells that innervate the skin
Pacinian corpuscle (modified Schwann cells): subcutis, deep pressure and vibration Meissners corpuscle: papillary dermis, rapidly adapting mechanoreceptors - light touch/pressure sensation Ruffini corpuscle: mechanoreceptors, stretching of skin
118
Name 2 bacterial infections of the skin
Impetigo: Staphylococcus/streptococcus Subcorneal blisters +/- pus Burst and spread: yellow crusting Highly contagious, children Cellulitis: Strep pyogenes/staph Superficial dermis, spreading factor Can lead to necrotising fasciitis Limbs – penetrating injury/bite
119
Lifecycle of a virus
Attachment, entry, uncoating, macromolecular synthesis, assembly, and release.
120
RNA must be .... polarised to be for translation to occur (viruses)
positively
121
Name the two main virus capsid symmetries
Icosahedral, helical
122
Viruses can have 4 different effects on cells
Acute cell death Chronic (a.k.a. persistent) infection - Continuous viral replication within cell, but cell survives. Latency- No virus replication, Viral genome present, but no production of viral proteins, Once infected, always infected, e.g. herpesvirus Virus replication can be reactivated Primary and secondary infections Transformation – immortalisation of the cell Eg Epstein-Barr virus (EBV) - cancer potential
123
3 effects of antibody binding to viruses and infected cells
Antibody - blocks binding and entry to cells (neutralization) - activates intracellular degradation via TRIM21 Antibody + complement - damage to enveloped viruses - opsonisation for phagocytosis Antibody bound to infected cells - antibody-dependent cellular cytotoxicity
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What is antibody neutralisation
Block attachment through steric interference, capsid stabilisation, structural changes.
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Intracellular degradation facilitated by TRIM21
Antibody recognition > TRIM recruitment > ubiquitination > proteasome degradation
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Antigenic shift vs drift
Shift is mixing of 2 separate viruses RNA/DNA, Drift is accumulation of mutations over time.
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what are and what is the Action of interferons in viral infections
Signals to neighbouring cells to undergo apoptosis, destroy RNA and reduce protein synthesis and activate immune cells
128
How is HLA1 involved in immune recognition
HLA I expression is lowered in some virally infected cells so natural killer cells can recognise it as abnormal and needs killing
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Killer cells kill cells via ...., .... and .....
Perforins (osmotic lysis), granzymes and the Fas ligand (apoptosis via caspase and endonucleases)
130
On which side of the neuronal membrane are Na+ ions more abundant?
: The neuronal membrane potential depends on the ionic concentrations on either side of the membrane. K + is more concentrated on the inside of the neuronal membrane, whereas Na+ and Ca2+ are more concentrated on the outside
131
There is a much greater potassium K+ concentration inside the cell than outside. Why, then, is the resting membrane potential negative?
The resting membrane potential is negative because the neuron is filled with negatively charged molecules, such as proteins, that do not traverse the cell membrane through channels the way ions do.
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Which ions carry the early inward and late outward currents during the action potential?
During the early part of the action potential, the influx of sodium ions across the membrane briefly depolarizes the membrane. The brief inward sodium current is a consequence of opening the voltage-gated sodium channels for only 1 msec. Membrane repolarization is the result of potassium efflux, which is the outward potassium current because of opening voltage-gated potassium channels after a delay of 1 msec.
133
How does the conduction velocity of action potential vary with axonal diameter? Why?
The speed of action potential depends on how far depolarization spreads ahead of action potential. This, in turn, depends on the physical characteristics of axons. The two paths that a positive charge can take are inside an axon and across the axonal membrane. When the axon is narrow with many open pores, more of the current flows across the axonal membrane and is lost. When the axon is wide with a few open pores, the current flows inside the axon. The farther down the axon the current flows, the farther ahead of the action potential the membrane will be depolarized and the faster the action potential will propagate. As a result, the conduction velocity of axons increases with the diameter of axons.
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Voltage-gated Na+ channels can be in 4 states
Resting (inactivated) Open (activated) Inactivated Closed and inactivated - absolute refractory period
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Absolute vs relative refractory period
Absolute is all gates inactivated, prevents refiring. Relative is a few are inactivated so a big stimulus could produce an action potential.
136
Multiple sclerosis
Autoimmune, attacks and hardens myelin sheath > slows nerve conduction > weakness, coordination, vision and speech issues.
137
Name the 3 main glial cells
Microglia - Remove debris from dead or degenerating glia Astrocytes - Regulate the chemical content of the extracellular space. e.g. neurotransmitter removal Oligodendrocytes (Scwann cells in the PNS)
138
4 lobes of the brain
From front to back and around Frontal - cognition and motor control Parietal - Sensory Occipital - vision Temporal - auditory and memory
139
How many cranial nerves are there?
12
140
How many pairs of spinal nerves are there?
31: 8 cervical (C) 12 thoracic (T) 5 lumbar (L) 5 sacral (S) 1 coccygeal (Co)
141
When looking at a thoracic X-Ray, what is ABCDE
Airways Bones Cardiac region Diaphragm Everything else
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What are the colours on X-Rays of Bone, Fat, Soft tissue, Air and Man made items
Bone = White Soft tissue = Grey Fat = Dark grey Air = Black Manmade = Bright White
143
Is posterior anterior or AP preferred?
PA is preferred - less magnification
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Weak acid drug - stomach and intestine absorption?
A- + H+ -> AH Stomach At low pH, [H+] is high, equilibrium goes towards HA Very little ionised > lots absorbed Intestine At high pH, [H+] is low, More ionised > little absorbed Less absorbed
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Weak base - stomach and intestine absorption
B + H+ -> BH+ Stomach At low pH, [H+] is high, Equilibrium goes towards BH+ Lots ionised Little absorbed Intestine At high pH, [H+] is low, Less ionised More absorbed
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Bioavailability
Amount of drug that reaches systemic circulation with respect to the amount administered
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What is first pass metabolism
Many drugs are metabolised by enzymes in the gut wall or the liver.
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Name two routes of administration that avoid first pass metabolism
Mouth - Sub-lingual, Buccal Rectal
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Routes of administration and advantages
Sub-lingual – glyceryl trinitrate Undergoes first pass metabolism Need quick response Sub-cutaneous – local anaesthetics Acting locally Can be given with vasoconstrictor to delay systemic absorption Intra-muscular depot preparations – contraceptives Gradual release  sustained concentrations Convenience Rectal – anti-epileptic drugs Diazepam for epilepsy when patient is fitting continuously Topical – anti-inflammatories Ibuprofen, avoids irritation to stomach Corticosteroids, to avoid systemic side effects Inhalation – asthma COPD drugs Direct to target, minimises side effects Intra-articular – anti-inflammatories Corticosteroids, direct to target, avoids systemic side effects
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Factors that affect absorption from the gut
Gastric emptying Gastrointestinal motility Blood flow Particle size and formulation Extended-release formulations Enteric coatings Physicochemical factors e.g. solubility, molecular weight, binding to calcium (esp. in milk) or fat in food Metabolism (enzyme-catalysed reactions)
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Volume of distribution
volume of plasma that would contain the total body content of the drug at a concentration equal to that in the plasma.
152
Describe drug solubility in Blood > interstitial > inside cells with respect to Vd
Hydrophilic > very lipid soluble 3.5 L/70kg > 14 > 40 > 40<
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Phases of drug metabolism
Phase 1 reactions often catalysed by cytochrome P450 enzymes (CYP). Important for non-polar drugs e.g. CYP1A2 - caffeine, paracetamol Phase 2: Conjugation - Increases solubility in water and therefore excretion in the kidney
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Drug metabolism in the liver depdnds on
Perfusion Plasma protein binding Secretion into bile Presence and activity of transporters and enzymes
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Clearance (drug)
the volume of plasma from which all the drug molecules would need to be removed per unit time to achieve the overall rate of elimination of drug from the body
156
Name the stages of cell growth
GO – No cellular activities regarding cell growth G1 – Cell grows to full size S – DNA synthesis for doubling genome (chromosome) G2 – Rapid cell contents production. Final Check for errors Mitosis – Cell divides Cytokinesis – Cell separates into daughter cells
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Describe a regulatory pathway regarding the cell cycle
E2F – S phase gene transcription factor - normally bound by retinoblastoma protein (Rb) rendering E2F inactive Under favourable conditions, Cyclins will be produced and bind to CDK Cyclin / CDK complex phosphorylates Rb Phosphorylated Rb changes conformation and uncouples from E2F E2F is free to act as transcription factor for S phase gene transcription
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Name example enzymes involved in S phase initiation in the cell cycle
Critical initiation of S phase by retinoblastoma protein phosphorylation regulated by Cyclin D / CDK4/6 and Cyclin E / CDK2 complexes
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What are the stages of mitosis?
Prophase – Chromosomes start condensing and organised. Spindle fibres formed. Nuclear membrane resolves Prometaphase – Chromosomes attached to spindle fibres. Chromosomes further condense Metaphase – Chromosomes start aligning in centre. Sister chromatids facing opposite poles Anaphase - Separation of sister chromatids then migrate to opposite poles Telophase - Chromatids in positions and start decondensing, Formation of nuclear membrane, Spindle fibres resolve Cytokinesis - Cytoplasm divides Completion of cell division Two identical cells formed
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Two types of microtubules projecting from the microtubule organising centres
Polar microtubules and the kinetochore microtubules (K fibres)
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Cell cycle checkpoints
Each stage of cell cycle cannot progress without checking for: DNA damage DNA replication error Spindle fibre assembly and chromosome alignment
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Affinity
Affinity: how tightly the drug binds its receptor. the concentration required to occupy the receptor
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Efficacy
maximum response
164
Potency
Concentration required to give half the maximum response (EC50).
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Allosteric antagonists are as good as competitive antagonisits. T/F?
False, may not be able to reduce response totally.
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Ligand gated ion channel example
Nicotinic Acetylcholine, GABA, Glutamate Small molecules Fast neurotransmission e.g. nerve to muscle (nicotinic), nerve to nerve. Movement of ions through channel  electrical activity
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GPCR Example
Muscarinic ACh, dopamine, adrenaline, noradrenaline, serotonin, opiods, Small molecules and peptides Neurotransmission, modulation of neurotransmission, Activation of enzymes and modulation of ion channels  signalling cascades
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Tyrosine Kinase example
EGF, VEGF, PDGF, TNFa, Interleukins, Interferons Peptides and proteins Regulate cell growth, proliferation, death Activation of protein signalling cascades leading to change in gene transcription
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Nuclear receptor example
Corticosteroids (e.g. cortisol) Sex steroids (e.g. oestrogen and testosterone) Thyroid hormone Steroids and thyroid hormone Regulate gene transcription Gene transcription  synthesis of mRNA and protein
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Consequentialism
Judge action by its outcome e.g. move carriage to kill1 instead of 5 is good.
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Deontology
Moral of the action itself - independent of the outcome e.g. dont move the carriage as you will actively be killing the 1 person
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Virtue ethics
What would a good person do
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Autonomy
Patient has ultimate decision making responsibility.
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Beneficence
Best interest of the patient
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Non-malifecence
Do not harm
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Justice
Act on Legality, rights, and distributive care
177
Describe serous membranes
line the inside of the body wall and cover many organs Formed from embryonic mesoderm Mesothelium: simple squamous epithelium + thin layer of connective tissue with blood vessels Inner visceral layer, outer parietal layer
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What is superficial fascia
Deep to skin: loose connective tissue and fat (adipose) Variable thickness Contains collagen, fat cells & elastic tissue
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What is deep fascia
Surrounds muscles Fibrous, strong and tough sheet Forms routes for infection spread Forms compartments: can have consequences during a bleed
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What is fascia
Connective tissue layers which can be thin, thick, fatty or loose
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Name examples of anatomical variation
Differences in build and shape (body habitus) Palmaris longus muscle Situs inversus and dextrocardia Renal agenesis: one kidney at birth instead of two
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What are the vertebral levels
7 Cervical 12 Thoracic 5 Lumbar Sacrum (5 fused) Coccyx (3/4 fused)
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Distinguishing features of the vertebrae
Spinous processes point inferiorly Heart-shaped vertebral bodies Vertebral bodies have costal facets for articulating with head of rib T1 – T10 transverse processes have transverse costal facets for articulating with tubercle of the corresponding rib
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How many ribs and which are true, false or floating
12 Ribs 1-7 = true ribs Articulate with the sternum via their own costal cartilage Ribs 8-10 = false ribs Articulate with the sternum via shared costal cartilage Ribs 11 & 12 = floating ribs Do not articulate with sternum
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Describe the anatomy of a typical rib
Ribs 3-9 Head: articulates with vertebral body at same level plus the vertebral body above Neck Tubercle: articulates with transverse process of vertebra at same level Costal angle Body or shaft with costal groove running inferiorly
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Describe the 1st rib
Flat, sickle-shaped appearance Single facet on head for articulation with T1 vertebral body only Subclavian grooves Scalene tubercle (anterior scalene muscle)
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Describe the 2nd rib
Longer than first rib Has two facets on head – articulates with T1 and T2 vertebral bodies Tuberosity for serratus anterior muscle
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Describe the 10th-12th ribs
10th – 12th ribs Single facet on head for articulation with one vertebral body e.g. T10 for 10th rib
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What are real spaces?
keep their structure when empty e.g. trachea (airway)
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What are potential spaces?
small, flattened spaces that have the potential to become much larger: Serous membrane cavities e.g. pleural cavity Fascial planes
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Name the 3 structures of the sternum
Manubrium, body and xiphoid process
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Describe features of the sternum and where they lie in relation to the rest of the body
Manubrium has attachments for the clavicles and first costal cartilages (for first ribs) Suprasternal (jugular) notch is at T2 vertebral level Sternal angle (manubriosternal joint) is at the level of the intervertebral disc between the T4 and T5 vertebrae Attachments for second costal cartilages Body of the sternum is between T5-T9 vertebral levels Xiphoid process is at T10 vertebral level
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What does the thoracic plane at the sternal angle signify in the mediastinum
The start and end of the arch of the aorta The site where the superior vena cava enters the heart The pulmonary trunk The bifurcation of the trachea into the left and right main bronchi
194
Describe the formation of the morula
After 3 days of cell division, 12-16 cells are evident. The embryo is now called a morula, because it looks like a mulberry. The inner cells of the morula are called the inner cell mass, and the surrounding cells are referred to as the outer cell mass.
195
Describe the formation of the blastocyst
Blastocyst forms an inner fluid filled cavity called the blastocele. Inner cells form the embryoblast at one pole, outer cell mass flattens and forms the trophoblast as a sphere around the whole thing.
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What is a teratogen?
An agent or factor which causes malformation of an embryo or disruption to a normal developmental process or deformation of a part of the body or dysplasia/abnormal organisation of cells in tissues resulting in a congenital abnormality/birth defect:
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What can prevent neural tube defects?
by taking 0.4 milligrams of folic acid daily
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Name different types of teratogens with examples
Infections Sexually transmitted e.g. chlamydia – premature rupture of membranes, preterm labour Non-sexual infections e.g. rubella (German measles) – heart defects Zika virus infection - microcephaly Maternal diet Lack of folic acid – neural tube defects (e.g. spina bifida) Maternal drugs Methotrexate (immunosuppressant used in rheumatoid arthritis): skeletal defects involving the face, cranium, limbs and vertebral column Environment Ionising radiation e.g. X-rays: microcephaly, mental deficiency, skeletal anomalies, delayed growth, cataracts Maternal health Alcohol: fetal alcohol syndrome: IUGR, mental deficiency, microcephaly, ocular anomalies, joint abnormalities, short palpebral fissures
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When are teratogens most likely to cause defects?
Embryonic weeks 3 to 8 are when teratogens are most likely to cause defects, as this is when organogenesis
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When are teratogens most likely to affect organ size?
After week 9
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Describe implantation of the blastocyst into the endometrium.
202
Describe bilaminar embryonic disc formation
Embryoblast forms two layers; epiblast and the hypoblast.
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Describe amniotic cavity formation
Cells from the epiblast layer form the lining (amnion) of the amniotic cavity
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Describe primary and secondary umbilical vesicle formation
Blastocele becomes the primary umbilical vesicle upon implantation. Splits into the primary remnant and the secondary by the extra embryonic coelom
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Describe trilaminar embryonic disc formation
The process begins with formation of the primitive streak on the surface of the epiblast Cells of the epiblast migrate toward the primitive streak They then slip beneath it in a process called invagination Some invaginating cells displace the hypoblast, creating the endoderm. Other cells come to lie between the epiblast and newly created endoderm to form mesoderm Cells remaining in the epiblast form ectoderm
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What does the endo, meso and ectoderm give rise to?
The ectoderm gives rise to the nervous system (neuroectoderm) and the epidermis of the skin (surface ectoderm). The mesoderm gives rise to the muscle cells and connective tissue in the body, the dermis of the skin and linings of the body cavities (serous membranes e.g. pleura, pericardium, peritoneum). The endoderm gives rise to the epithelial lining of the digestive and respiratory systems and many internal organs (eg liver, pancreas, thyroid gland).
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Describe embryo neuralation
The notochord induces the overlying ectoderm to thicken and form the neural plate. The neural plate lengthens and the lateral edges elevate to form the neural folds with the neural groove lying in the midline. The neural folds approach each other in the midline and begin to fuse. The folds fuse in a cranial and caudal direction from the cervical (neck) region The neural tube is formed. The two ends of the neural tube eventually close The rudimentary central nervous system (brain and spinal cord) is formed
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What do neural crest cells give rise to?
Neural crest cells from the trunk region migrate to form melanocytes in the skin, sympathetic neurons and ganglia of the autonomic and enteric nervous system, Schwann cells and cells of the adrenal medulla. Neural crest cells from the cranial end form glial nerve cells, parts of the connective tissues of the face and skull and neurons of cranial ganglia.
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Describe the changes that the mesodermal layer undergoes after gastrulation.
The mesodermal germ layer comes to form either side of the developing notochord (day 17) The mesoderm begins to thicken to form the paraxial mesoderm. Laterally, the mesoderm remains thinner and forms the lateral plate mesoderm The lateral plate mesoderm begins to break down and divide into two layers (20 days) The 2 layers are called the somatic or parietal mesoderm and the visceral or splanchnic mesoderm : The splitting of the lateral plate mesoderm (together with folding of the embryo) will eventually create the intraembryonic coelom or cavity
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What do the somites form?
The sclerotome – which forms the vertebrae and ribs The myotome – which forms the skeletal muscles of the back and limbs The dermatome – which ultimately forms the dermis for the skin of the back and body wall
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Describe embryo lateral folding.
The lateral body walls come together anteriorly in the midline and pinch the yolk sac as they do so. Eventually the lateral body walls close completely: The only area of the embryo where the lateral walls don’t completely close is at the umbilical cord Part of the endoderm is incorporated into the body of the embryo and forms the primitive gut tube The intraembryonic coelom/cavity has been formed) – this single cavity will eventually divide to form the pericardial, pleural and peritoneal cavities.
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What mesoderm covers the intraembryonic cavity wall and the gut tube
The intraembryonic cavity wall is lined with parietal mesoderm and the gut tube (and eventually other organs) is lined with visceral mesoderm.
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Describe longitudinal folding
At the same time as lateral folding, lengthening of the neural tube causes the embryo to curve into the foetal position as the head and tail regions move ventrally and longitudinal folding of the embryo occurs As the head and tail longitudinal folding occurs, the amnion is pulled down to surround the embryo which then comes to lie within the amniotic cavity: As folding continues the heart and the oropharyngeal membrane (where the mouth will form) turn under onto the ventral surface of the embryo As longitudinal folding continues, the yolk sac is ‘pinched’ until the connection with the gut tube is narrowed to form the omphaloenteric (or vitelline) duct
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Outline organogenesis in weeks
4 - the neural tube continues to close; somites continue to develop (21-29 by now); 1-3rd pharyngeal arches have developed (form the head and neck); the heart, liver and early limb buds have begun to form, the tongue has begun to form, the heart tubes have looped (and beats); the early lung buds develop. Week 5: 30 somites are present; the developing eye and ear are visible; the early nose and face has started to form; the stomodeum (the future mouth) is evident, the early heart chambers are forming; the liver is expanding; paddle-shaped limb buds are evident. Week 6: further development of the limbs showing hand buds and digital rays; the elbow joint forms; parts of the face have developed (oral and nasal cavities); the early inner and middle ear structures are forming; the gut tube is elongating and looping (normal herniation of the gut is evident due to the rapidly growing intestines). Week 7: the eyelids have formed; the external ear is evident; partial separation of the digital rays is evident but the hand plates are still webbed; the foot plate is present; the trunk has straightened; further genital development is evident; palate formation has started. Week 8: the head is more rounded, the hands and feet come closer together and touch each other; coordinated limb movements are seen; gut herniation is still evident (they return to the abdominal cavity during the 10th week); accurate sex identification is not possible yet.
215
Describe the location of parasympathetic ganglia
Preganglionic neurones are in grey matter of brainstem ( midbrain, pons, medulla) OR lateral horn of spinal cord grey matter from S2-4 (hence craniosacral) Long, synapse with postganglionic neurones at or near organ Cell bodies are in distinct ganglia near or on their final target organ Short, synapse on target organ
216
Describe the location of sympathetic ganglia
Pre-ganglionic cell bodies are in the lateral horn of spinal grey matter from T1-L2 (hence thoracolumbar) Short, synapse with postganglionic neurones near spinal cord Cell bodies are in the sympathetic chain or other named ganglia Long, synapse on the target organ
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Which part of para and sympathetic neurones are myelinated?
preganglionic neurones
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Describe nerve routes in the sympathetic chain
Pre-ganglionic fibres pass into the chain via the white ramus communicans (white because fibres are myelinated) Fibres concerned with head and thorax terminate with post-synaptic cell bodies in sympathetic chain. These return to spinal nerve via grey ramus communicans (grey because unmyelinated) Pre-ganglionic fibres concerned with pelvic and abdominal viscera pass uninterrupted through chain to the plexuses - to the corresponding post-ganglionic neurones
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Name the midbrain ps nuclei
Edinger-Westphal nucleus of the oculomotor nerve (CN III) Provides parasympathetic innervation to iris & muscles of ciliary body (constricts pupils and change shape of lense)
220
Name the PS nuclei of the Pons
Superior salivatory nucleus of the facial nerve (CN VII) Provides parasympathetic innervation to lacrimal glands (to produce tears) and sublingual and submandibular salivary glands (to produce saliva)
221
Name the medulla nuclei
Inferior salivatory nucleus of glossopharyngeal nerve (CN IX) Provides parasympathetic innervation to parotid salivary gland (to produce saliva) Nucleus ambiguus (axons travel in CN X) Provides parasympathetic innervation to larynx, pharynx & heart Dorsal motor nucleus of vagus nerve (CN X) Provides parasympathetic innervation to lungs, pancreas, GI tract & heart
222
What brain structure regulates the ANS?
Hypothalamus via the Dorsal Longitudinal Fasciculus being the principle tract.
223
Name two disorders of the ANS
Postural hypotension - Dizziness, damage to sympathetic nerves supplying blood vessels due to diabetes or syphilis e.g.. Horners syndrome - Drooping of upper eyelid, miosis, anhidrosis, interuption of s nerve to eye. CAUSED BY BRAIN LESIONS OR LUNG cancer (affects ganglia)
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Diagnostic test specificity
the ability of the test to correctly identify people without the disease; i.e., the percentage of individuals without the disease who have negative test results. True Negative/ (True Negative+ False Positive)
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Diagnostic test sensitivity
the ability of the test to correctly identify people with the disease; i.e., the percentage of individuals with the disease who have positive test results. True Positive/ (True Positive+ False negative)
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When is high sensitivity good and when is high specificity
High sensitivity useful (e.g., screening breast cancer, HIV) Life-threatening diseases (if untreated) Improvement in survival rate with early treatment Is ok to “over diagnose” (more false positives) as all positives will have further testing – screening High specificity useful (e.g. Down syndrome during pregnancy) Not life-threatening if untreated Subsequent tests/treatments are too invasive or have serious side effects High cost of treatment Low pre-test probability (prevalence)
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Positive predictive value
True positive/(True Positive + False Positive)
228
Prevalance =
(TP + FN)/ (TP + FN + FP + TN)
229
What is the kappa ratio
Measuring the extent to which agreement exceeds that expected by chance requires a measurement statistic called the kappa.
230
Apoptosis as a physiological event
Embryological development (GI lumen, digits) Involution of hormone dependant tissues (breast/uterus) Maintenance of cell number in tissues with high cell turnover (intestinal epithelium) Elimination of unwanted individual cells (neutrophils /lymphocytes after inflammation/immune response)
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Apoptosis as a pathological event
DNA damage (eg radiation, cytotoxicity, viral infection. p53) Misfolded proteins: due to intrinsic or extrinsic mechanisms accumulate in RER and cause stress (eg death of nerve cells in neurodegenerative conditions) Growth factor deprivation
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Morphology of apoptosis
Degradation of cytoskeletal framework Fragmentation of DNA Loss of mitochondrial function Nucleus shrinks (pyknosis) and fragments (karyorrhexis) Cell shrinks Cell fragments: apoptotic bodies Membrane intact but attracts phagocytes – secondary necrosis
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Intrinsic pathway of apoptosis
Cell injury detected by Bcl-2 sensors. The Bcl-2 family - apoptotic regulators B-cell lymphoma gene 2 (Bcl-2) – controls the permeability of mitochondria Anti-apoptotic members e.g. Bcl-2, Bcl-XL Pro-apoptotic members e.g. Bax, Bak, Bok Balance of pro- and anti- apoptosis proteins determine mitochondrial membrane permeability Increased permeability = cytochrome C release Cytochrome C activates caspases > endonucleases >cytoskeleton breakdown
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Extrinisic pathway of apoptosis
The Fas family - cell death receptors Part of the Tumour Necrosis Factor (TNF) and Neuronal Growth Factor (NGF) receptor family Cell death receptors differ from the rest of the family by the presence of the intracellular Death Domain (DD): Fas, TNFR1 Fas Ligand (FasL) - membrane protein expressed on activated T lymphocytes. Ligands bind to Fas or TNF receptor. Cluster and activate caspases via adapter proteins.
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Morphology and mechanism of reversible injury
Swelling - hydropic change Earliest manifestation of almost all forms of cell injury As a result of sodium and water influx into cell Membrane damage rendering it more permeable to sodium Membrane sodium pump damaged Membrane sodium pump deprived of ATP Fatty change Organs actively involved in lipid metabolism e.g. liver (steatosis) Accumulation of triglyceride-filled vacuoles due to disruption of metabolic pathways – toxic injury e.g. alcoholism
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Pathological apoptosis examples
Bcl-2 overexpressed in many cancers: lymphomas, small lung cell carcinoma, chronic lymphocytic leukaemia, melanoma Apoptosis deregulated: prostate, ovarian, cervical, bladder, breast, colorectal, pancreatic and gastric cancers Too little apoptosis: autoimmune diseases, cancer, chronic inflammatory diseases Too much apoptosis: immunodeficiency (e.g. AIDS), neurodegenerative diseases
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What is necrosis
Continuation of reversible injury: severe swelling of mitochondria, lysosomes and membrane damage Lysosomal enzymes are released and the organelles are destroyed (autolysis) Necrosis is followed by inflammation
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Coagulative necrosis
Most common Due to interruption of vascular supply (ischaemia) - infarction Common in solid organs e.g. heart and kidney Denaturation of protein Gross appearance: firm, dry and slightly swollen (cooked) Histology appearance: pale staining with loss of nuclei and cellular components but retention of tissue architecture
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Liquefactive/colliquative necrosis
Seen in the brain (primary event) and in infections (secondary to infection of necrotic tissue with pyogenic organisms: abscess) Due to hydrolytic lysosomal enzymes. Neutrophils contributing to the liquefaction (from hydrolases) Gross appearance: local accumulation of protein-rich, semifluid material. Histology: No architecture, proteins and phagocytes
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Caseous necrosis
Seen in tuberculosis Combination of coagulative and liquefactive necrosis Gross appearance: yellow-white cheese-like Histology: amorphous proteinaceous mass, lysed cells with no cell outlines/architecture. Surrounded by a granulomatous inflammation
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Gummatous necrosis
Gross: Firm and rubbery dead tissue Histology: no architecture, amorphous proteinaceous mass-like caseous Only referred to in the context of syphilis infection
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Gangrene
Necrosis of all tissue in an area Wet gangrene-coagulative necrosis from lost blood supply + liquefactive from infection (often bacterial) Dry gangrene- coagulative necrosis from anoxia (diabetes mellitus/atherosclerosis)
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Fibrinoid necrosis
Seen in blood vessels in the case of immune reactions e.g. arteries in the case of vasculitis/malignant hypertension Necrotic area of smooth muscle layer in the artery is filled with fibrin leaked from vessels Histological only
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Fat necrosis
Necrosis of adipose tissue Due to trauma (breast) or lipolytic enzymes (pancreas). Gross: foci of hard, yellow material Histology: Necrotic fat cells and inflammation
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Haemorrhagic necrosis
Blockage of venous drainage - leads to congestion and failure of arterial perfusion. Gross: dead tissues infiltrated by large numbers of extravasated red cells. Histology: congested tissues with abundant RBCs
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What is ischaemia?
Impaired vascular perfusion, depriving the affected tissue of vital nutrients, especially oxygen Tissue effects can be reversible, but is dependent on: duration of the ischaemic period-brief ischaemic episodes may be recoverable metabolic demands of the tissue-cardiac myocytes and cerebral neurones are the most vulnerable
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What is infarction?
Death (necrosis) of tissue as a result of ischaemia
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Cellular events in ischaemia
Reduction or loss of O2 - ATP production reduced - failure of energy-dependent processes Membrane pumps fail (require energy) - Na+ and H2O influx – swelling Anaerobic glycolysis – increased lactic acid – decreased pH – compromised enzyme environment ER swelling – ribosome detachment – decreased protein synthesis Organelle membrane damage: Increased cytosolic Ca2+ (from mitochondria and ER) Lysosomal breakdown releases enzymes (proteases etc.) - digestion of cell components
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Reperfusion injury
Further effects of ischaemia when perfusion is re-established Oxygen free radicals built up Depletion of scavengers (antioxidants e.g. vitamin E) Excess generation (e.g. mitochondria, neutrophils) Build-up of metabolic by-products (ATP use) – O2 influx – conversion to reactive oxidants DNA, protein and lipid damage Additional tissue damage due to increased numbers of inflammatory cells – increased secondary inflammation
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Tissue susceptibility to infarction
Availability of blood supply Anastomosis – collateral blood supply Watershed area – vulnerable in hypotension Infarct shape dependent on perfusion territory of the occluded blood supply e.g. wedge-shaped Metabolic activity of tissue Neurones and cardiac myocytes are most vulnerable to ischaemia - high metabolic demand Regenerative ability Tissues which can regenerate (labile, stable) can recover, non-dividing tissue (permanent) will have scar tissue
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What are the main energy sources for the heart when: 1 Immediately after a meal? 2 Between meals in a steady state? 3 During starvation or prolonged exercising?
1 = glucose (glycolysis) 2 = Fatty acids (β-oxidation) 3 = Ketone bodies and fatty acids
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What are the fates of pyruvate in both aerobic and anaerobic respiration?
In aerobic respiration it is converted into acetyl-CoA which enters the citric acid cycle to make NADH and ATP In anaerobic respiration it can be used to regenerate NAD+ which can be used to make small numbers of ATP. This requires the enzyme lactate dehydrogenase which produces lactate and NAD+ from pyruvate and NADH. This has the effect of lowering the pH
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What are the clinical signs of cardiac ischemia?
Chest pain (angina) Shortness of breath Fast heartbeat Shoulder or back pain Neck, jaw, or arm pain Sweating/clamminess Nausea/vomiting Fatigue Dizziness or light-headedness Myocardial infarction (heart attack)
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What are the main biomarkers for cardiac ischemia and why do we need more than one?
CK-MB (mass), Cardiac Troponins (I or T) and Myoglobin. More are in development. We need more than one marker as none of the markers we have are ideal, so a multiple approach give a more accurate picture of what is happening. Also, each of the markers are useful on different time scales allowing the diagnosis of an MI from 1 hr to 15 days
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What time frames do we see biomarkers appear after a myocardial infarction (heart attack) and how long are they a useful tool as a marker of a past cardiac event?
Myoglobin is released withing 1-4 hr but gone in 24hr CK-MB is released in 3-12 hr and is around for 2-3 days Troponin T is released from 4-12 hr and is around for up to 15 days
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What are free radicals? What can they do
Single unpaired electron in outer orbit Superoxide (O2-) hydroxyl radical (·OH) Normally generated during oxidative phosphorylation and Mopped up by antioxidants: e.g. vitamins A, C and E Or neutralised by enzymes e.g. catalase This is an increased problem when cellular homeostasis is lost (particularly when mitochondria are disrupted) Can result in lipid peroxidation and protein damage thus increasing cellular dysfunction
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Temporal aspect of cell damage
Ion leakage, metabolite accumulation, membrane rupture - macromolecules
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Describe the structure and function of smooth muscle
A single nucleus present in the central thick portion. Cytoplasm appears homogenous without striations. Fewer mitochondria as compared to the skeletal muscle. Metabolism mostly glycolytic. Actin, Myosin & Tropomyosin but NO Troponin Dense bodies serve the same purpose as the Z-discs Attached to the dense bodies are numerous numbers of Actin filaments Interspersed between the actin filaments are Myosin filaments In the walls of hollow organs, blood vessels, eye, glands, uterus, skin. Some functions: propel urine, mix food in digestive tract, dilating/constricting pupils, regulating blood flow, In some locations, autorhythmic Controlled involuntarily by endocrine and autonomic nervous systems
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Cardiac muscle structure and function
Striated, Actin and myosin, Epinephrine, Ca2+ from ECF and SR, Troponin as ca2+ regulatory protein, Gap junctions. Heart: major source of movement of blood Autorhythmic Controlled involuntarily by endocrine and autonomic nervous systems
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Skeletal muscle structure and function
Striated, Actin and myosin, No homrmonal contril, Ca2+ from SR, Troponin as ca2+ regulatory protein. Attached to bones Makes up 40% of body weight Responsible for locomotion, facial expressions, posture, respiratory movements, other types of body movement Voluntary in action; controlled by somatic motor neurons
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How is smooth muscle organised
Grouped into sheets in walls of hollow organs Longitudinal layer – muscle fibers run parallel to organ’s long axis Circular layer – muscle fibers run around circumference of the organ Both layers participate in peristalsis
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Single unit Smooth muscle
Muscles of visceral organs .e.g. GIT, uterus, ureters & some of the smaller blood vessels. Form a sheet or bundles of tissue. Cell membranes show gap junctions that allows AP to pass rapidly from cell to cell. AP spreads rapidly throughout the sheet of cells – cells contract as a single unit.
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Multi-unit smooth muscle
Iris & Ciliary body of the eye, large arteries, Piloerector muscles Showing discrete, individual smooth muscle fibers. Smooth muscle cells not electrically linked. Each muscle fiber innervated by a single nerve ending. NT itself can spread and lead to an AP. Selective activation of each muscle fiber that can then contract independently of each other.
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Smooth muscle contraction mechanism
Ca2+ binds calmodulin > Calmodulin binds myosin light chain kinase > MLCK phosphorylates light chain in myosin heads > ATPase activity increases > Actin slides along myosin to create tension.
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How does epinephrine work
Causes hyperpolarization which causes a reduced amount of cytosolic Ca2+ and thus relaxes the muscle cell
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Ach vs norepinephrine
ACh & norepinephrine are never secreted by the same nerve fiber ACh can be excitatory or inhibitory - determined by the type of receptor expressed by the target cell ACh and NE usually cause the opposite reaction at a target cell (If Ach is stimulatory then NE will most likely be inhibitory) Depending on the type of receptor norepinephrine and epinephrine can have different results on the smooth muscle cell Epinephrine bound to beta-adrenergic receptors on smooth muscle cells of the intestine causes them to relax Epinephrine also binds to the alpha2-adrenergic receptor found on smooth muscle cells lining the blood vessels in the intestinal tract, skin, and kidneys Epinephrine bound to alpha2 receptors causes the arteries to contract (constrict), reducing circulation to these organs
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Describe the relative nutritional value of the following nutrients: Carbohydrates, Proteins, Fats, Alcohol
More ATP comes from fat than alcohol than carbohydrate or protein
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Glycolysis
1 Glucose goes through a series of linked enzymatic reactions and is split into: 2 Pyruvate 4 ATP (but 2 were used) 2 NADH
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How is pyruvate turned into Acetyl CoA?
Transported into mitochondria Oxidatively decarboxylated to acetyl-CoA Pyruvate dehydrogenase (enzyme complex- 3 enzymes multiple copies) Irreversible reaction This reaction mainly takes place in tissues with high oxidative capacity- e.g. cardiac
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What is the TCA cycle?
For every 1 glucose (2 acetyl CoA) the cycle generates: 4 CO2 6 NADH 2 FADH2 2 ATP De na de na a fa na
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What is oxidative phosphorylation
The transfer of electrons from organic compounds through a series of electron carriers to O2 (or other inorganic or organic molecules (via oxidization)- keep in mind for free radicals) The transfer of electrons from one carrier to the next generates energy which is used to make ATP from ADP by chemiosmosis
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What has a higher energy yield? fat or glucose
Fat
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How is fat stored
As Triacylglycerols
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How is energy derived from fats?
Free Fatty acids converted to acetyl CoA for the TCA cycle. 131 ATP from whole process
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Why make glycogen?
Glycogen mobilized faster than fat 1% - 2% of mass in rested skeletal muscle Glycogen  Glucose-6-Phosphate G-6-P enters glycolytic pathway Glucose metabolism is both aerobic and anaerobic (in part) Fat metabolism is only aerobic Muscle lacks G-6-phosphatase Glucose cannot be exported Liver has G-6-phosphatase Glucose can be exported Liver provides body’s glucose
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What are ketone bodies?
During excessive fatty acid mobilisation: examples: b-oxidation, fasting, type I diabetes acetyl CoA production in liver is very high mitochondria oxidation of acetyl CoA cannot match production acetoacetate accumulates acetoacetate (~75%) is reduced to b-hydrobutyrate ketone bodies (acetoacetate, acetone & b-hydroxybutyrate) enter circulation ketone bodies can be used for energy in heart and brain (converted back to acetyl CoA)
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vDefinition of an Adverse Drug Reaction:
An unwanted or harmful reaction experienced following the administration of a drug or combination of drugs under normal conditions of use and which is suspected to be related to the drug
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ADRs: top five examples
NSAIDS (29.6%) e.g. aspirin, ibuprofen GI bleeding, CV haemorrhage, renal impairment Diuretics (27.3%) for high blood pressure Renal impairment, hypotension, electrolyte disturbance Warfarin (10.5%) To prevent clotting GI bleeding, haematuria, prolonged INR ACE-I/ARB (7.7%) for high blood pressure Renal impairment, hypotension, electrolyte disturbance Antidepressants (7.1%) Confusion, hypotension, constipation, hyponatraemia
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On target ADRs
Exaggeration of the drug’s normal effect E.g. excessive bleeding with warfarin Generally dose-dependent and can be reversed by lowering dose Why? Genetic factors Age Concurrent disease (esp liver or kidney disease)
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Off-target ADRs (4)
Idiosyncratic, not pharmacologically predictable e.g. allergic response to penicillins May be chronic - persisting for a relatively long time e.g. benzodiazepine dependence; analgesic nephropathy Delayed reactions - become apparent some time after the use of a medicine e.g. carcinogenic and teratogenic effects End of use reactions - Associated with withdrawal of a medicine e.g. insomnia, anxiety and perceptual disturbances following withdrawal of benzodiazepines such as midazolam
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Example of pharmacovigilance: (2)
UK Yellow Card scheme https://yellowcard.mhra.gov.uk/ Started in 1964 in response to thalidomide. Can lead to… Additional information in product leaflet Change in dosage Warnings to particular patient groups Withdrawal from market Black triangle scheme New medicines and vaccines that are under additional monitoring have an inverted black triangle symbol (▼) displayed in their package leaflet and in the British National Formulary (BNF) You should report all suspected ADRs for these products.
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Polar uncharged amino acids
Serine, Threonine, Cystine, Asparagine Glutamine, Tyrosine Santa’s Team Craft a giant toy Santa’s Team Crafts New Quilts Yearly
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Polar acidic amino acids
Aspartate, Glutamate Arctic glee Dragons Eat
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Polar basic amino acids
Lysine, Arginine, Histidine Lapland Arctic home Knights Riding Horses