Microscopy and cell structure Flashcards
magnification
the number of times and image has been enlarged compared to its actual size
resolution
the minimum distance between two objects to be able to distinguish them as two separate objects
gram stain colours
gram-positive bacteria: purple/violet
gram-negative bacteria: pink/red
what (and what colour) does iodine stain?
starch grains (blue-black)
what colours does methylene blue stain what?
nucleus: dark blue (+ve charge of dye attracted to -ve charge of DNA)
cytoplasm: light blue
purpose of staining
increase contrast to identify different cell types and/or organelles
two types of stains
- simple
- differential
simple stain with example
- one stain used
- uniformly stains all structures of cell
- used to measure cell size but not to identify organelles
- e.g. methylene blue
differential stain with example
- multiple stains used
- used to differentiate different organelles
- e.g. gram stain
negative stain technique
dye with a -ve charge repels -ve charged organelles + materials (usually stains cytoplasm so organelles stand out)
four advantages of electron microscopes
- shoes details of organelles
- higher resolution
- higher magnification
- two types (TEM + SEM)
six disadvantages of electron microscopes
- large (not portable)
- affected by magnetic fields
- preparation of specimens is lengthy and require expertise
- preparation can distort specimen
- images are black and white
- expensive (to buy and operate)
- vacuum is required
- specimens must be dead
what types of images do SEM and TEM each make
SEM: 3D images of surfaces
TEM: 2D images of cross sections
order of microscopes increasing in resolution and magnification
- light
- SEM
- TEM
ultrastructure
features of a cell which can be seen using an electron microscope
artefacts
visible structural detail caused by the processing of a specimen (not part of the actual specimen) e.g. air bubble trapped under cover slip or distortion of membranes from preparation for e- microscopes
wet mount steps
- pipette a drop of water on the middle of a slide
- using tweezers, place specimen on top of water droplet
- add a drop of iodine solution
- place a cover slip over the sample by slowly lowering it from an angle (to avoid air bubbles)
- dab excess liquid from the edges
membrane of a permanent cell vacuole
tonoplast
nucleus vs nucleolus
nucleolus contains the DNA, RNA and proteins is within the nucleus (some cells have more than one nucleolus)
features that are present in all bacteria
- cytoplasm
- plasma membrane
- cell wall (made of peptidoglycan)
- 70s ribosomes
- circular DNA
features that are present in some bacteria (but not all) and their purpose
- slime capsule (protection)
- plasmid DNA
- infold in membranes (absorb phosytnetic substrates or fix nitrogen)
- flagellum (motion)
- pili (attached to other cells or surfaces + sexual reproduction)
intrinsic vs extrinsic proteins
intrinsic proteins spam the whole phospholipid bilayer
extrinsic proteins only span one layer of the phospholipid bilayer OR lie on the surface
components of a plasma membrane
- phospholipids
- intrinsic/extrinsic proteins
- channel proteins
- carrier proteins
- glycoproteins
- glycolipids
three components of the cytoskeleton
- microfilaments
- microtubules
- intermediate fibres