microbiology practicals - sem 2 Flashcards

1
Q

how can bacterial meningitis cause symptoms such as severe headache, nausea and vomiting

A

strong inflammatory response –> pus –> blocks various foramina –> increased intracranial pressure

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2
Q

what is the commonest cause of meningitis

A

viruses

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3
Q

what are the 3 major bacteria causing acute meningitis and what are their characteristic gram stains

A

Haemophilus influenza B - small gram negative rods Strep pneumonia - gram positive diplococci Neisseria meningitidis - grave negative cocci in pairs

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4
Q

how does the determination of protein, glucose and leucocytes help in the management of acute meningitis

A

gives you an indication whether the infection is viral or bacterial or fungal

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5
Q

what rapid diagnostic tests are used in the diagnosis of meningitis

A

gram stain slide agglutination with latex beads covered with Ab PCR

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6
Q

when should a patient be started on treatment with meningitis

A

as soon as it is suspected

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7
Q

what is the antibiotic treatment for the major causes of bacterial meningitis

A

3rd generation cephalosporin such as cefitriaxone

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8
Q

which organism is the fine petecial rash assocaited with

A

N. meningitidis

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9
Q

Why is CSF inoculated into serum broth when testing for meningitis

A

patient may have been given antibiotics prior to LP - and therefore very hard to gram stain. However if just one bacterium is left it will grow overnight in serum broth and therefore can isolate the organism easier

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10
Q

which common cause of meningitis is imperative that AB susceptibility testing is performed

A

Strep pneumonia - increasing prevalence to beta-lactams (by mutating beta-lactam binding protein)

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11
Q

what is the AB that is “added in” for treatment of Strep pneumonia meningitis

A

Vancomycin

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12
Q

What is the characteristic gram stain of Strep B aggolacti

A

gram positive cocci in long chains

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13
Q

What is the current course for prevention of birth transmitted gram negative bacteria to babies (that would cause meningitis)

A

screen mother between 35-37 weeks gestation –> if positive –> give AB 4 hours before delivery

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14
Q

what is the commonest cause of viral meningitis

A

enterovirus

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15
Q

what types of things can determine disease prevalence

A
  • climate/geography - vectors, reservoirs - weather - wealth of community - hygiene, sanitation, vaccination programs - length of stay - local agriculture and animal husbandary
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16
Q

parasitic infections are particularly prevalent in which type of travellers

A

those returning from the tropics

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17
Q

how do you diagnose parasitic infection in a returned travellor

A
  • blood (thick and thin films) - blood for serology - faeces - sticky tape to perianal area - skin snips, biopsy specimens
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18
Q

what do you use thick and thin blood films for

A

thick - trypanosomiasis and filariasis thick and thin films for malaria

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19
Q

what is the gold standard for diagnosis of eukaryotic parasites

A

visualising them micro/macroscopically

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20
Q

infections in travellers fall into what 3 broad categories

A

common infections exotic infections emerging or re-emerging infections

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21
Q

how can a hookworm infection lead to anaemia

A

hookworm attaches to intestinal wall –> bleed

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22
Q

in what stage of the life cycle does hookworm infect humans

A

semi-matured hookworm that lives in soil –> penetrates bare feet

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23
Q

in what stage of the life cycle does hookworm make you ill

A

when it matures into adult worm and attaches to the intestinal wall

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24
Q

how do you diagnose hookworm

A

eggs in faeces

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25
Q

what causes the abdominal discomfort associated with ascaris infection

A

blockage of viscera (due to large size)

26
Q

in what stage of the life cycle of ascaris infects humans

A

fertile eggs - ate fertile eggs from faeces

27
Q

how does infected RBCs (with malaria) lead to organ damage

A

the infected RBCs are sticky and clog up the microvasculature for the organ = organ damage

28
Q

why do you get inflammatory symptoms with malaria

A

due to cytokine response that you get when RBCs burst

29
Q

why do you get splenomegaly with malarial infection

A

due to the spleen trying to clear all the infected RBCs

30
Q

in what stage of the life cycle does malaria infect humans

A

as sporozoites

31
Q

in what stage of the life cycle does malaria make you sick

A

as merozoites that infect RBCs

32
Q

why is strongyloides particularly nasty

A

because it can cause autoinfection (can carry gut microflora into the blood when penetrating the intestinal wall) –> gram negative septicaemia

33
Q

why does salmonella typhi live in the body

A

within macrophages

34
Q

treatment of typhoid

A

quinolones 3rd generation cephalosporins macrolides

35
Q

how do STIs lead to an increased risk of HIV

A

infection brings in WBCs to the site –> HIV can more easily infect CD4 T cells

36
Q

what is the mainstay diagnostic investigations for STIs

A

serology for antigen and antibodies

37
Q

how can you tell if an infection is acute or chronic

A

type of antibody - IgM initially, converted to IgG rising antibody titre suggests acute (GOLD STANDARD) low affinity antibodies

38
Q

why is it more likely for perinatal infection with a primary infection of the mother

A

baby wont get any Ab from the mother that would be protective if the mother hasnt encountered the antigen before

39
Q

the interpretation of serology results for STIs depends on

A

infectious agent patient test specificity and sensitivity

40
Q

what is the difference between the avidity and affinity of Ab

A

avidity = the strength of Ab binding to R from a preparation of a MIXTURE of Ab affinity = the strength of Ab binding to R from a preparation of pure Ab

41
Q

what are the different things that “Ab against X are negative” mean

A
  • hasnt been infected with X before (still susceptible) - hasn’t been vaccinated against X - has been vaccinated against X but didnt convert to Ab +ve - has the infection, but still in incubation period - could be immunocompromised - assay may not be sensitive enough - lab stuffed up
42
Q

what is the difference between an Ab response to an infectious agent or a vaccine

A

vaccine = Abs only made against a specific antigen native infection = make Ab against multiple antigens

43
Q

what is the main population that has Gonorrhoea

A

men who have sex with men

44
Q

treatment for Gonorrhea

A

ceftriaxone + azithromycin

45
Q

how are the hepatitis viruses spread?

A

A and E = foecal-oral route B, C and D = parenteral route

46
Q

what is the most sensitive marker for acute hepatitis B infection

A

Hep B surface antigen (will be negative for Ab)

47
Q

what is the significance of being HepBe Ag positive

A

it means that there is active replication of the virus

48
Q

what serology results would you expect from someone who becomes a chronic carrier of HepB

A

HbsAg +ve (negative for Ab) IgG +ve (IgM for acute infection)

49
Q

what serology results would you expect from someone who clears a Hep B infection

A
  • HbsAg -ve - Hbs Ab +ve - IgM -ve - IgG +ve - HbeAg -ve - Hbe Ab +ve
50
Q

what is the treatment for acute Hep B infection

A

give hyperimmune globulin and hep B vaccine

51
Q

which ganglia does HSV 2 hide in

A

trigeminal or sacral

52
Q

treatment of HSV

A

acyclovir

53
Q

what are the three most common causes of erythematous maculopapular rash

A

rubella parvovirus enterovirus

54
Q

which viruses can lead to significant leucocytosis

A

EBC, CMV early HIV

55
Q

what test do you perform to test for EBV

A

the monospot - have Ab to sheep RBCs (EBV infected B cells will spit out there Ab - and due to the random recombination of Ab genes there will be one that reacts to sheep blood by chance)

56
Q

use of cetrimide agar

A

contains a disinfectant

57
Q

gram stains of neisseria and clostridium

A

neisseria - GNC clostridium - GPR

58
Q

how can you tell the difference between strep pyogenes and strep agolacti

A

pyogenes (group A) = bactraicin sensitive, grows on MAC

agolacti (group B) = bactraicin R, does not grow on MAC

(both beta-haemolytic)

59
Q

explain the sensitization phase of an antigen for a type 1 HS reaction

A

APC presents to Th2 –> produces IL-4,5 and CD40L –> promotes B cell differentiation and isotype switching to IgE –> IgE binds to mast cell via FceR1

60
Q

what happens during the response phase of T1HS reaction

A

allerge promotes cross linking of IgE on mast cell –> causes degranulation and exocytosis of pre-formed mediators such as histamine, TNF-alpha, leuktrienes, PGs etc

61
Q

what happens to the gut, skin, airways and blood vessels during T1HS reaction

A

gut - increased secretion and peristalsis –> diarrhoea and vomiting

skin - increased fluid secretion and vasodilation –> swelling, itching, uticaria

airways –> decreased bronchial diameter and increased mucous –> obstruction

blood vessels –> increased permeability and blood flow –> increasd fluid into tissues –> shock