Microbiology - GI infections Flashcards

1
Q

what is gastroenteritis?

A
  • rapid onset diarrhoeal illness
  • last <2 weeks
  • with diarrhoea (loose or unformed stool) >3/ day or >200g of stool
  • either viral or bacterial in aetiology
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2
Q

what is diarrhoea?

A

loose or watery stoool
>=3 times in 24 hours
acute/chronic /persistent

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3
Q

acute/chronic /persistent diarrhoea time limits

A

acute <14 days (may be bacterial or viral)
persistent 14-29 dats
chronic >30 days (parasites/non-infectious aetiology)

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4
Q

how is small bowel diarrhoea characterised?

A
  • watery
  • crampy abdo pain
  • bloating and gas
  • inflammatory cells rare
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5
Q

how is large bowel diarrhoea characterised?

A
  • small volume
  • painful
  • occur with blood/mucous
  • inflammatory cells common
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6
Q

what are the risk factors for gastroenteritis?

A
  • food borne
  • exposure related (outbreak, travel history, occupational, health care related, animal contacts, reptile contact, childcare facility)
  • host related (young children/elderly, immunosuppressed, MSM, anal-gential, oral-anal, haemochromatosis)
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7
Q

what are the reportable organisms?

A
underreporting of GI infections (most self limiting)
Reportable:
- campylobacter
- salmonella
- shigella
- E. coli 0157
- listeria
- norovirus
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8
Q

what are the 3 mechanisms of disease?

A
  1. secretory diarrhoea (from toxin production)
  2. inflammatory diarrhoea
  3. enteric fever
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9
Q

give 2 examples of secretory diarrhoea

A
  1. cholera toxin

2. superantigens

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10
Q

how does the cholera toxin work?

A
  • subunit procution
  • cAMP opens Cl- channels at apical membrane of enterocytes
  • causes efflux of Cl- to lumen with loss of water and electrolytes
  • profound dehydration
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11
Q

how do superantigens work?

A
  • superantigens bind directly to TCRs and MHC molecules
  • massive cytokine production by CD4 cells (systemic toxicity and suppression of adaptive response)
  • secretory diarrhoea
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12
Q

what are the different ways you can diagnose GI infections?

A
  • stool testing (cultures, PCR etc)
  • enteric fever (blood and stool tested)
  • parasites (stools for MS&C)
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13
Q

which bugs cause these extra-intestinal manifestations?

  • aortitis
  • osteomyelitis
  • deep tissue infection
A
  • salmonella

- yersinia

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14
Q

which bugs cause these extra-intestinal manifestations?

- haemolytic anaemia

A
  • campylobacter

- yersinia

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15
Q

which bugs cause these extra-intestinal manifestations?

- glomerulonephritis

A
  • shigella
  • campylobacter
  • yersinia
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16
Q

which bugs cause these extra-intestinal manifestations?

- HUS

A
  • STEC

- shigella

17
Q

which bugs cause these extra-intestinal manifestations?

- erythema nodosum

A
  • yersinia
  • campylobacter
  • salmonella
  • shigella
18
Q

which bugs cause these extra-intestinal manifestations?

- reactive arthritis

A
  • salmonella
  • shigella
  • campylobacter
  • yersinia
19
Q

which bugs cause these extra-intestinal manifestations?

- meningitis

A
  • listeria

- salmonella

20
Q

describe staph aureus

A
  • catalase and coagulase +ve

- gram +ve coccus

21
Q

how does staph aureus cause diarrhoea?

A
  • superantigen
  • produces enterotoxin that acts as a superantigen in GI tract
  • releases IL1 and IL2
  • causes prominent vomiting and watery non bloody diarrhoea
  • self limiting
22
Q

describe bacillus cereus

A

gram +ve rod spores

23
Q

how do you get bacillus cereus?

A
  • spores germinate in reheated fried rice

- heat stable emetic toxin (not destroyed by reheating/ if food not heated to high enough temp)

24
Q

what does bacillus cereus infection cause?

A
  • watery non-bloody diarrhoea
  • self limiting
  • rare cause of bacteraemia in vulberable population
  • can cause cerebral abscess
25
what is clostridia? 3 types?
- gram +ve anaerobe - clostridium botulinum - clostridium pefringens - clostridium difficle
26
what is the source of clostridium botulinum?
- canned or vacuum-packed foods | - ingestion of preformed toxin (inactivated by cooking)
27
how does clostridium botulinum cause botulisism? tx?
- blocks ACh release from peripheral nerve synapses = paralysis - treatment with antitoxin
28
what does clostridium pefringens cause? source?
``` food poisoning (watery diarrhoea, cramps, vomiting lasting 24 hours) source: reheated food (meat) incubation = 8-16 hours ```
29
what are the 2 toxins clostridium difficile produces?
pseudomembranous colitis - Toxin A: enterotoxin = inflammation - Toxin B = cytotoxin = virulence factor (more dangerous than A)
30
which antibiotics are responsible for antibiotic related colitis?
- cephalosporins - cipro - clindamycin Tx: PO vancomycin
31
describe listeria monocytogenes
- beta haemolytic - aesculin positive - tumbling-weed motility
32
source of listeria monocytogenes
refrigerated food unpasteurized dairy vegetabloes (grows at 4 degrees)
33
what are the symptoms of listeria monocytogenes
``` watery diarrhoea cramps headache fever little vomiting ```
34
who are at risk for listeria monocytogenes
perinatal infection immunocompromised patients elderly BAD for pregnant women
35
tx for listeria monocytogenes
ampicillin ceftriaxone cotrimoxazole