Microbiology General, Mycology and Parasitology Flashcards
Prokaryote vs. Eukaryote
Ribosome Size: Pro: 70S Euk: 80S
Nucleic Acid Location: Pro: Nucleoid (cytoplasm)
Euk: Nucleus
DNA Type: Pro: Circular Euk: Linerar
Bacteria, Virus, Fungi, Parasites
Bacteria: Prokaryote (Outer surf: cell wall of peptidoglycan) RNA and DNA. Rep: binary fission
Virus: Noncellular (outer surf: Protein capsid and lipoprotein env.) RNA or DNA. Rep: assembly within host cell
Fungi: Eukaryote (Outer surf: cell wall of chitin) RNA and DNA. Rep: budding (yeast) Mitosis (molds)
Parasite: Eukaryote (outer surf: cell membrane) RNA and DNA. Rep: Mitosis
Endemic
infection occurs at minimal levels within a population
Epidemic
infection occurs more frequently than normal within a population
Pandemic
infection occurs worldwide
Infectious States
Acute: Short-term active infection with symptoms
Chronic: long-term active infection with symptoms
Subclinical: Infection is detectable only by serological tests
Latent: No active growth of microorganisms but potential for reactivation
Carrier: Active growth of microorganisms with or without symptoms
Symbiotic Association
Symbiosis: The essential association between two different organisms that live close to each other with or without mutual benefit
- Mutualism: Both organisms derive benefit from each other
- Commensalism: One organism benefits, whereas the other is neither harmed nor helped
- Parasitism: One organism benefits, whereas the other is harmed
Infectious Swellings
Abscess: An acute inflammatory lesion consisting of a localized collection of pus surrounded by a cellular wall
Granuloma: A chronic inflammatory lesion consisting of granulation tissue: fibrosis (fibroblasts), angiogenesis (new capillaries) and inflammatory cells (macrophages, lymphocytes, plasma cells, epithelioid cells, and multinucleated giant cells
Cyst: An epithelial-lined sac filled with fluid or air
Cellulitis: An acute, diffuse swelling along fascial planes that separate muscle bundles
- Pus: is a creamy substance that contains dead neutrophils, necrotic cells and exudate
Sterilization, disinfection, antiseptics, pasteuration, sanitization
- Common sterilization techniques, disinfectants, and antiseptics
-
Sterilization: The killing of all microorganisms, including bacterial spores.
- Heat sterilization (moist heat and dry heat) is the most reliable (spore test).
- Normal cycle: 121 C for 15-20 min
- Heat sensitive: glutaraldehyde
- Spore tests (with Bacillus stearothermophilus) are recommended on a weekly basis
- Heat sterilization (moist heat and dry heat) is the most reliable (spore test).
-
Disinfection: Killing of many but not all microorganisms (inanimate objects)
- Phenols (rare), Quarternary ammonium compounds (antiseptic), Chlorine (most common form = sodium hypochlorite = bleach)
-
Antiseptics: Chemicals that kill microorganisms on the surface of skin and mucous membranes
- Many antiseptics can also be used as disinfectants
- Iodophors (most effective skin antiseptic), Ethanol and isopropyl alcohol (most widely used skin antiseptic), Hydrogen peroxide (only effective against catalase negative organisms), chlorhexidine gluconate (handwash/mouth rinse), Triclosan (handwash/toothpaste)
- Pasteurization: A method of heat-killing milk-borne pathogens such as mycobacterium tuberculosis, salmonella, streptococcus, listeria and brucella. Heats milk to 62 C for 30 min., then rapid cooling
- Sanitization: method of treating public water supplies to reduce microbial load
Infection control Regulations vs. recommendations
Center for disease control and Prevention (CDC) = major agency responsible for infectious disease epidemiology, surveillance, and prevention. It provides recommendations and guidelines for infection control procedures used by healthcare workers
Occupational Safety and Health Administration (OSHA), a division of US Department of Labor, is responsible for composing and enforcing infection control laws and regulations that MUST be followed by healthcare workers. OSHA may use CDC recommendations and guidelines in drafting its mandates
Universal vs. standard precautions
Universal Precautions: All human blood (and other body fluids that contain viable blood) are treated as infectious. Emphasizes prevention of bloodborne diseases (HIV, HBV, etc)
Standard precautions: Any body fluid (excretion or secretion) except sweat, regardless of the presence of blood, is treated as infectious. Emphasizes prevention of bloodborne, as well as airborne, droplet, and contact-transmitted diseases.
- The greatest risk for bloodborne infection among healthcare workers is HBV
- Handwashing is the most important infection control practice for reducing nosocomial infections and must be performed after removal of PPE
What are Fungi? describe details
Fungi
- Gram (+), eukaryotic microorganisms
- All are either obligate (the majority) or facultative aerobes
- Cell membranes: lipid bilayer contains ergosterol
- Cell walls: carbohydrate and protein (chitin)
- Capsule (if present): Polysaccharide coating
- Laboratory diagnosis by KOH preparation
Most fungal spores and conidia are killed at temperature > 80C for 30 min.
Most antifungal drugs target the ergosterol component of fungal cell membranes, altering their permeability.
Explain Fungal Reproduction
Fungal Reproduction:
-
Sexual: Mating and formation of spores
- Zygospores: single, large spores with thick walls
- Ascospores: Formed in a sac (ascus)
- Basidiospores: Formed on the tip of a pedestal (basidium)
-
Asexual: Budding and formation of conidia (asexual spores)
- Arthrospores: Formed by fragmentation of the ends of hyphae
- Chlamydospores: Rounded, thick-walled, and highly resistant
- Blastospores: formed by budding process
- Sporangiospores: Formed on a stalk within a sac (sporangium)
Explain the pathogenesis of fungal/Mycology infections
Pathogenesis:
- Fungal infection: Leads to a largely cell-mediated immune response (Type IV Hypersensitivity reaction) and Granuloma formation
- Mycotoxicosis: Induced by ingestion of fungal toxin
- Allergic response: Type I hypersensitivity reactions to inhalation of fungal spores
What are Aflatoxins
Aflatoxins are hepatocarcinogenic toxins produced by Aspergillus flavus, generally found on contaminated grains and peanuts
What are the classifications of fungi?
Morphology
Reproduction
Yeasts
- Morphology: Single Cells
- Reproduction: Asexual budding
Molds
- Morphology: Hyphae (long filaments) which form a mat-like structure (mycelium)
- Reproduction: Cell division
Some fungi are dimophic - they exist as molds at ambient temperatures but as yeasts at warmer (body) temperature
What are Major systemic fungal infections that are medically relevant
- Blastomyces dermatitidis
- Coccidioides immitis
- Desert valley fever, San Joaquin fever
- Histoplasma capsulatum
What are Blastomyces dermatitidis Fungi
- Disease
- Type
- Characteristics
- Treatment
What are Blastomyces dermatitidis Fungi
systemic infection
-
Blastomycosis
- Type: Dimorphic
- Endemic in eastern US and central america
- Inhalation of microconidia produces granulomatous nodules in lungs and respiratory infection
- Treatment: Itraconazole, Amphotericin B
What are Coccidioides immitis Fungi
- Disease
- Type
- Characteristics
- Treatment
What are Coccidioides immitis Fungi
systemic infection
-
Coccidioidomycosis (desert valley fever, San Joaquin fever)
- Type: Dimorphic
- Endemic in southwest US and latin America
- Inhalation of arthrospores produces respiratory infection
- Treatment: Amphotericin B, Itraconazole, Ketoconazole, Fluconazole
What are Histoplasma capsulatum Fungi
- Disease
- Type
- Characteristics
- Treatment
What are Histoplasma capsulatum Fungi
systemic infection
-
Histoplasmosis
- Type: Dimorphic
- Endemic in ohio and mississippi river valleys
- Found in soil often contaminated by bird/bat droppings
- Inhalation of microconidia produces respiratory infection
- Yeast cells located within host macrophages
- Treatment: Amphotericin B, Itraconazole, Fluconazole
What are the major cutaneous fungal infections
- Disease: Dermatophytosis
- Trichophyton sp
- Epidermophyton sp
- Microsporum sp
What are the funguses that cause Dermatophytosis
What is the type of fungi
characteristics
Treatment
Dermatophytosis
Major cutaneous Fungal infections
- Fungus:
- Trichophyton sp.
- Epidermophyton sp.
- Microsporum sp.
- Type: Molds
- Characteristics:
- Tinea corporus (ringworm)
- Tinea capitis (scalp itch)
- Tinea cruris (jock itch)
- Tinea pedis (athlete’s foot)
- Tinea unguium (nail fungus)
- Treatment:
- Griseofulvin
- Miconazole
- Clotrimazole
- Tolnaftate
What are the major opportunistic fungal infections
- Aspergillus fumigatus
- Candida albicans
- Cryptococcus neoformans
- Mucor sp.
- Rizopus sp.
- Absidia sp.
What are Aspergillus fumigatus fungi?
- Disease
- Type
- Characteristics
- Susceptibility
What are Aspergillus fumigatus fungi?
Major opportunistic Fungal infection
-
Aspergillosis
- Type: Mold
- Inhalation of conidia causes respiratory infection and aspergilloma (fungus ball) formation in lungs
-
Susceptibility: AIDS, Organ transplantation
- Produce aflatoxins
What are Candida albicans fungi?
- Disease
- Type
- Characteristics
- Susceptibility
What are Candida albicans fungi?
Major opportunistic Fungal Infections
-
Candidiasis
- Vaginitis
- Angular cheilitis
- Median rhomboid
- Glossitis
- Type: Yeast
- Part of normal human flora of mouth, vagina, GI tract, and skin
- Appears as budding yeasts or pseudohyphae
- Susceptibility: AIDS, Prolonged use of antibiotics
What are Cryptococcus neoformans fungi?
- Disease
- Type
- Characteristics
- Susceptibility
What are Cryptococcus neoformans fungi?
Major opportunistic infections
-
Cryptococcosis
- Type: Yeast
- Heavily encapsulated.
- Inhalation of spores causes respiratory infection, meningitis, and pneumonia
- Susceptibility: AIDS
What are Mucor sp., Rhizopus sp., Absidia sp. fungi?
- Disease
- Type
- Characteristics
- Susceptibility
What are Mucor sp., Rhizopus sp., Absidia sp. fungi?
Major opportunistic fungal infections
-
Mucormycosis
- Type: Molds
- Inhalation of conidia causes respiratory, skin, paranasal sinus, and brain infections
- Susceptibility: Diabetes (ketoacidosis), leukemia, burns
What are common antifungal drugs to treat candidiasis
-
Nystatin
- Mechanism: Binds to ergosterol
- Forms: Topical, Oral
-
Amphotericin B
- Mechanism: Binds to ergosterol
- Forms: topical, oral, intravenous
-
Clotrimazole
- Mechanism: Inhibits ergosterol synthesis
- Forms: Troche
-
Ketoconazole
- Mechanism: Inhibits ergosterol synthesis and blocks fungal cytochrome P450
- Forms: Tablet
-
Fluconazole
- Mechanism: Inhibits ergosterol synthesis and blocks fungal cytochrome P450
- Forms: Tablet
What are the two classifications of a Parasite?
-
Protozoa
- Unicellular, eukaryotic microorganism that lack a cell wall and largely infect blood cells, intestinal and urogenital tissue, and meninges
-
Metazoa (helminths)
- Multicellular worms that often infect the intestines, brain, liver and other tissues

What type of immune response does parasitic infections elicit
Parasitic infections generally elicit an IgE-mediated host immune response accompanied by marked eosinophilia
What are common Protozoa associated with Human Infection
-
Entamoeba histolytica
-
Amebiasis: Dysentery, Liver abscess
- Contaminated water with fecal
- Motile Trophozoite (intestinal), Nonmotile cyst (water)
-
Amebiasis: Dysentery, Liver abscess
-
Giardia lamblia
-
Giardiasis: Diarrhea, Flatulence
- Contaminated water with fecal
- Motile Trophozoite (intestinal), Nonmotile cyst (water)
-
Giardiasis: Diarrhea, Flatulence
-
Cryptosporidium parvum
-
Cryptosporidiosis: Diarrhea
- Associated with AIDS
-
Cryptosporidiosis: Diarrhea
-
Trichomonas vaginalis
-
Trichomoniasis (Vaginitis, Urethritis)
- STD
- Motile Trophozoite
-
Trichomoniasis (Vaginitis, Urethritis)
-
Plasmodium vivax, ovale, malariae, falciparum (fatal)
-
Malaria (influenza-like onset), fever, headache, anemia, splenomegaly
- Female mosphitoes (anopheles)
- Sporozoite, Merozoite (liver), Hypnozoite (latent), causes lysis of erythrocytes
-
Malaria (influenza-like onset), fever, headache, anemia, splenomegaly
-
Toxoplasma gondii
-
Toxoplasmosis: CNS infection, encephalitis, seizure, associated with AIDS
- Fecal-oral. Transplacental
- Motile Trophozoite (intesitinal), nonmotile cysts (uncooked meat and cat feces)
-
Toxoplasmosis: CNS infection, encephalitis, seizure, associated with AIDS
-
Pneumocystis jiroveci (formerly P. carinii)
-
Pneumonia
- Inhalation
- Fungus (originally classified as protozoan)
- Associated with AIDS
- Found in oral cavity, but not pathologic
-
Pneumonia

What are the common Metazoa (Helminths) associated with human infection
-
Taenia solium
- Taeniasis (tapeworm)
- Ingestion of undercooked pork
- Cysticercosis (muscle cysts)
- Neurocysticercosis (brain cysts)
- Taeniasis (tapeworm)
-
Taenia saginata
- Taeniasis (tapeworm)
- Ingestion of undercooked beef
- Does not cause cysticecosis
- Taeniasis (tapeworm)
-
Enterobius vermicularis
- Enterobiasis (pinworm)
- Ingestion of worm eggs
- Most common worm in US
- Associated with perianal pruritis
- Enterobiasis (pinworm)
-
Trichinella spiralis
- Trichinosis (roundworm)
- Ingestion of undercooked meat (pork, wild game)
- Larvae only grow in striated muscle
- Associated with muscle pain, periorbital edema, fever
- Trichinosis (roundworm)
