Microbiology Bacteriology Flashcards
What do all bacteria contain, (except one type: what is the exception)
- All bacteria (except Mycoplasma sp.) contain a selectively permeable plasma membrane surrounded by a peptidoglycan cell wall of differing thickness
-
Peptidoglycan is a cross-linked polysaccharide consisting of alternating N-acetylmuramic acid and N-acetylglucosamine residues (NAG and NAM)
- Salivary lysozyme cleaves the glycosidic bonds of the peptidoglycan molecule
-
Peptidoglycan is a cross-linked polysaccharide consisting of alternating N-acetylmuramic acid and N-acetylglucosamine residues (NAG and NAM)
- A gelatinous polysaccharide capsule surrounds the cell wall, which functions in virulence (prevents opsonization and phagocytosis), antigenicity, and bacterial adhesion
- All bacterial capsules are polysaccharides except that of Bacillus anthracis, which is a protein containing D-glutamate
Bacterial Genetic Exchange
Genetic information is exchanged between bacteria in three ways (conjugation, transduction, and transformation), creating genetic variability and antibiotic resistance
- Plasmids : Extrachromosomal DNA that replicates independently within bacteria. They determine traits not essential to their viability, but allow them to adapt (eg. antibiotic resistance)
-
Transposition : Transfer of DNA within a bacteria cell occurs via transposons , which are portions of DNA that “jump” from plasmid -> chromosome and vise versa
- Regardless of the mode of exchange, the DNA becomes integrated into the host cell chromosome by recombination
- Bacteria reproduces by binary fission , in which one parent cell divides into two progeny cells. Bacteria growth is thus exponential
Explain the three types of Bacterial Genetic Exchange
-
Transformation:
- DNA transfer by: Uptake of naked DNA
- DNA transfer from environment only a few natural transformers
- Streptococcus, Haemophilus, Neisseria gonorrhoeae
-
Conjugation:
- Transfer largest amount of genetic information
- DNA transfer by: Conjugated tube (sex pilus)
- Bacterial DNA is transferred as a separate F plasmid (fertility factor):
- F+ cell -> F- cell (plasmid only)
- Or the F plasmid can be incorporated into the bacterial chromosome:
- Hfr cell -> F- cell (plasmid and chromosomal genes)
-
Transduction:
- DNA transfer by: Virus (bacteriophage)
- Can occur via lytic or lysogenic bacteriophage replication pathways
Bacterial Virulence Factors:
Mediators of Bacterial Adhesion/Attachment
- Capsule: Polysaccharide (except in Bacillus anthracis)
- Glycocalyx: Polysaccharide (allows adhesion to teeth, heart valves, catheters)
- Fimbriae/pili: Glycoproteins (shorter appendages)
- Adhesins: Surface proteins
Bacterial Virulence Factors:
Mediators of Evasion of Hoste Defenses
- Capsule: Prevents opsonization and phagocytosis
-
Surface Proteins:
- M protein: Prevents phagocytosis (from group A streptococci)
- Protein A: Prevents opsinization and phagocytosis (From Staph. aureus)
-
Enzymes:
- Coagulase: Promotes fibrin clot formation (staphylococcus species)
- IgA protease: Degrades IgA by cleaving Amino acids (from Strep. pneumoniae, H. influenzae, Neisseria sp)
- Leukocidins: Destroy polymorphonuclear neutrophils (PMNs) and macrophages
Bacterial Virulence Factors:
Mediators of Host Tissue Destruction
- Enzymes
- Collagenases (metalloproteinases): Degrade collagen
- Hyaluronidase: Degrades hyaluronic acid
- Lecithinase: Hydrolyzes lecithin to destroy plasma membranes. Causes gas gangrene
- Streptodornase (DNase): Depolymerizes DNA
- Streptolysin O: Causes beta hemolysis (oxygen-labile)
- Streptolysin S: Causes beta hemolysis (oxygen-Stable)
- Pneumolysin: Causes beta-hemolysis
- Streptokinase: Activates plasminogen to dissolve clots
- Staphylokinase: Activates plasminogen to dissolve clots
- Exfoliatin : Epidermolytic protease that cleaves desmoglein. Causes scalded skin syndrom
- Toxins
-
Exotoxin
- Location: Outer cell wall in G+ and G-
- Structure: Polypeptides
- Toxicity: High
- Heat Stable: No
- Characteristics: Include enterotoxins (exotoxins affecting intestinal epithelial cells) and detected by ELISA
-
Endotoxin
- Location: Within cell wall in G- & Listeria
- Structure: LPS; Lipid A (toxic portion)
- Toxicity: Low
- Heat Stable: Yes
- Characteristics: Not secreted, but released when bacteria die
-
Exotoxin
Comparison of Gram-positive and gram-negative bacteria
What is acid fast stain?
-
Gram-Positive:
- Stain color: Purple
- Peptidoglycan wall: Thick
- Major wall constituent: Lipoteichoic acid (LTA)
- Periplasmic Space: no
- Endotoxin: No
-
Gram Negative:
- Stain color: Pink
- Peptidoglycan wall: Thin (2 lipid layers)
- Major wall constituent: Lipopolysaccharide (LPS)
- Periplasmic Space: yes
- Endotoxin: Yes
Acid Fast Stain: Mycobacteria sp:
- Mycobacteria cell walls contain mostly mycolic acid, and very little peptidoglycan
What are Gram + cocci
- Catalase +
- Catalase -
-
Catalase +
- Staphylococcus (Clusters)
-
Catalase -
- Streptococcus (chains)
After the catalase test on Gram + cocci, what further test breaks down Catalase + bacteria. What are the results
-
Coagulase +
- S.aureus
-
Coagulase -
- All the rest!!!
- S. epidermidis
- S. saprophyticus
- All the rest!!!
What are the further breakdowns of Catalase - bacteria?
-
(Catalase - = Streptococcus (chains)
- Can be further broken down into Hemolysis
-
Partial hemolysis (Green) = ALPHA (almost)
-
S. pneumoniae
- Capsule (+ quellung) optochin senesitive, bile soluble
- Viridan streptococci
- Eg. Strep mutans
- No capsule
- Optochin resistant, not bile soluble
-
S. pneumoniae
-
Complete hemolysis (Clear) = BETA (best)
- Further calassified by Lancefield groups which are determined by C carbohydrate composition of cell wall
- Group A
- S. pyogenes
- Bacitracin sensitive
- Also some Enterococcus
- Group B
- S. agalactiae
- Bacitracin resistant
-
No Hemolysis = GAMMA (Garbage)
- Enterococcus (E. faecatis)
- Peptostreptococcus (anaerobe)
- Group D Strep
Explain the basics of Streptococci Gram + bacteria and its species
Gram-Positive Cocci: Streptococci
- Grow in pairs or chains
- Many are part of the normal human flora
- Catalase -
-
Classified by lysis of erythrocytes (hemolysis) when plated on blood agar
- Alpha = almost (green), Beta = best (clear), Gamma = garbage (none)
- Beta-hemolytic Strep are further classified by Lancefield groups (Groups A, B, C, F, G, etc). Many Group D strep have since been reclassified as enterococci
- Lancefield group is determined by the C carbohydrate composition of the cell wall
Explain the basics of Staphylococci and the major species
Gram-Positive Cocci = Staphylococci
- Grow in grapelike clusters
- Produce pyogenic (suppurative) infections
- Catalase +: rids H2O2
What microorganism causes Meningitis, Otitis media (children), Pneumonia, Sinusitis
Strep. pneumoniae
(lancet-shaped diplococcus)
Alpha hemolysis
Major virulence Factors:
- Capsule
- Pneumolysin
- IgA protease
What microorganism causes caries and endocarditis?
Viridans group:
Strep. mutans
Strep. sanguis
Alpha hemolytic
Virulence: part of normal flora or oropharynx
What microorganism causes pyogenic infections, pharyngitis, cellulitis, impetigo, scarlet fever, rheumatic fever, glomerulonephritis
strawberry-like rash
Strep. pyogenes
Beta hemolysis (group A)
Major virulence factors:
- M PROTEIN
- Hyaluronidase
- Streptokinase
- Erythrogenic toxin
- Streptolysin O and S
- Exotoxin A and B
What microorganism is the number one cause of neonatal pneumonia, as well as neonatal meningitis, neonatal sepsis
Strep. agalactiae
Beta hemolysis (Group B)
Major virulence factor:
- Capsule
What microorganism causes subacute endocarditis (associated with colon cancer)?
Strep. bovis
Gamma hemolytic (Group D)
Major Virulence Factor:
- Normal colon flora
What microorganism is associated with UTI and subacute endocarditis?
Enterococci:
E. faecalis
E. faecium
Gamma hemolysis (group D)
Major virulence factor:
- Normal colon flora
What content do spores contain that is ultimately killed by autoclaving
dipicolinic acid in their core
What microorganism causes the following diseases:
- Abscess
- Pneumonia
- Toxic shock syndrome
- Scalded skin syndrome
- Food poisoning (enterotoxin)
- MRSA
- Endocarditis
- Osteomyelitis
Staph. aureus
Coagulase +
Beta-hemolytic
Major virulence factors:
- Protein A
- beta-lactamase
- enterotoxin
- TSST
- Exfoliatin
- Hyaluronidase
- Staphylokinase
What microorganism causes:
- Infection of IV, catheters and prosthetic devices
Staph. epidermidis
Coagulase -
Gamma hemolytic
Major virulence factors:
- Normal skin flora
What microorganism causes:
- UTI
S. saprophyticus
Coagulase -
Gamma hemolytic
Major virulence factors:
- Normal vaginal flora
Name the spore-forming Gram Positive bacilli?
- Bacillus anthracis
- Bacillus cereus
- Clostridium botulinum
- Clostridium tetani
- Clostridium perfringens
- Clostridium difficile
What microorganism is responsible for:
- cutaneous: black eschar (painless ulcer)
- Pulmonary: inhalation of spores
Bacillus anthracis
-> Causes anthrax
Gram + bacilli
O2 Req: Aerobic
Spore-forming
Major Virulence Factors:
- Anthrax toxin
- Polypeptide capsule (has D-glutamate)
What microorganism is responsible for food poisoning due to the ingestion of reheated grains and rice (Fried rice)
Bacillus cereus
Gram + bacilli
O2 req: Facultative
Spore-forming
Major virulence factor:
- Enterotoxin
What microorganism is responsible for the following symptoms
- CN/muscular paralysis
- Respiratory failure
- commonly caused by the ingestion of undercooked canned foods, fish, ham, pork
Clostridium botulinum
Gram + bacilli
O2 Req: Anaerobic
Spore-forming
Major virulence factors:
- Botulinum toxin (neurotoxin)
Most potent bacterial toxin
Botox derives from exotoxin A
What microorganism is responsible for the following symptoms:
- Associated with puncture wounds
- Spastic paralysis
- Trismus (lock jaw)
Clostridium tetani
Causes Tetanus
Gram + bacilli
O2 Req: Anaerobic
Spore-forming
Major virulence factors:
- Tetanus toxin (neurotoxin)
What microorganism causes the following diseases:
- Gas gangrene (necrotizing faciitis, myonecrosis)
- Food poisoning (injection of reheated meats)
Clostridium perfringens
Gram + bacilli
O2 req: Anaerobic
Spore-forming
Major virulence factors:
- Alpha toxin (lecithinase)