Microbiology Flashcards
Three domains
- bacteria
- archaea
- eukarya
major groups of human pathogens
- protozoa
- fungi
- bacteria
- viruses
features of eukaryotes
linear chromosomes with histones, introns and axons, 80S ribosomes, no cell wall and cell cycle
features of prokaryotes
single-celled, introns rare, single circular chromosome, 70S ribosomes, cell wall
define nucleoid
contains DNA and proteins, no membrane, chromosomes are single and circular
how does energy generation occur across the cytoplasmic membrane?
electrons are released from compounds in the cytoplasm and passed through a series of electron acceptors. Protons are passed out creating a gradient.
what allows bacteria to stick together?
fimbriae and pili
what is needed for prokaryotic growth?
food, temp, pH, osmotic protection and oxygen
gram classification of bacteria
stain bacteria purple
plankton growth
- initial attachment
- irreversible attachment to each other
- maturation one- growth
- maturation two
- dispersion- spreads
how can microorganisms be classified?
- appearance/ structural features
- gram staining
- growth requirements
- type of media
- biochemical tests
- molecular tests
describe different shapes of bacteria
cocci, bacilli and spiral-shaped
obligate aerobes
require oxygen
obligate anaerobes
killed by oxygen
facultative anaerobes
tolerate oxygen
capnophillic
prefer high CO2 levels
selective media
presence of specific substances for growth, inhibits others
differential media
used to differentiate organisms that are closely related
heamolysis
disruption of red blood cells
biochemical test
coagulate and catalase test
define microbiome
combined genetic material of microorganisms in a particular environment
define endogenous
microorganisms
define exogenous
not of the normal flora
define pathogenesis
parasite life cycle
define virulence
capacity of a microbe to cause damage to the host
define commensal
organism that is part of the normal flora (endogenous)
define opportunistic
change in natural immunity
name six types of infectious agents
bacteria, viruses, fungi, protozoa, parasites, prions
Gram +ve membrane is made up of?
peptidoglycan is thick
Gram +ve colour
dark violet
Gram -ve composition
peptidoglycan, LPS and endotoxin
Gram -ve colour
pink
describe fimbriae/pili
extensions of the cell wall in prokaryotes
colour of alpha-heamolysis
green (partial)
colour of beta-heamolysis
yellow (complete)
colour of gamma-heamolysis
nothing happens
describe the coagulase test
tests for the enzyme coagulase which is produced by staph aureus
describe the catalase test
aerobic bacteria produce this enzyme- effervescence seen
which stain is staph aureus
gram +ve, dark purple
give some examples of serological (body fluid) tests
- PCR
- mass spec
describe the microbiome
contains endogenous (microorganisms) and exogenous (not part of the normal flora)
define a coliform
rod-shaped bacteria (bacilli)
describe how fever is produced
- endotoxin produced from gram -ve membrane interacts with macrophages.
- this causes the release of cytokines into the bloodstream
- travel to hypothalamus which stimulates prostaglandins that increases body temp
describe sepsis
blood vessels become leaky and the lost fluid causes the heart to work harder to continue to perfuse the organs. They shut down to help the brain- risk of haemorrhage
define an antibiotic
drug used to prevent or treat infection caused by micro-organisms
two categories of antibiotics
- bacteriostatic
2. bactericidal
characteristics of an ideal antibiotic
selective toxicity (minimal toxicity to the host) bactericidal long half-life distribution no side effects oral preparation
gram -ve cocci
neisseria meningitidis
neisseria gonorrhoeae
gram -ve bacilli (normal flora in GI)
E. coli
klebsiella spp.
enterobacter spp.
proteus spp.
gram -ve bacilli (pathogens in GI)
salmonella spp.
shigella spp.
verotoxin (E. coli)
gram +ve cocci
streptococcus
staphylococcus (staph aureus)
enterococcus
gram +ve bacilli
clostridia
how can natural resistance fail?
target not present or accessible
development of structure (biofilms and persister cells)
metabolism
mechanisms of antibiotic resistance
mutation horizontal gene transfer altered permeability inactivation e.g. beta-lactamases altered target site replacement pathway
antibiotics that target the cell wall (categories)
- penicillins
2. glycopeptides
gram +ve penicillins
flucloxacillin
gram -ve penicillins
temocillin
gram +ve and gram -ve penicillins
amoxicillin
co-amoxiclav
tazocin
gram +ve glycopeptides (no such thing as gram -ve)
vancomycin
teicoplanin
antibiotics that target protein synthesis
ahminoglycosides (gentamicin), tetracyclines and macrolides
antibiotics that target folic acid synthesis
sulphonamides and trimethoprim
antibiotics that target nucleic acids
metronidazole
quinolones
fluoroquinolone
C. diff 4 C’s
cephalosporin
co-amoxiclav
cipofloxacin
clindamycin
which antibiotic is used to treat gram +ve aerobes
amoxicillin
which antibiotic is used to treat gram -ve aerobes
gentamicin
which antibiotic is used to treat anaerobes
metronidazole