Microbiology Flashcards
Which enveloped viruses acquire the envelope from nuclear membrane of the host cell?
Herpesviruses (CMV, etc)
Infection that can cause achalasia. Common background of the patient. Mechanism.
- Trypanosoma cruzi ▶️ neurotoxin ▶️ destroy myenteric plexus ▶️ intramural, parasympathetic denervation of smooth muscle
- Patient come from central or South America
Coccus gram positive that can synthesize dextran from sucrose. What allow this property to do?
Streptococcus viridans (mutans, sangini) Adhere to tooth enamel ▶️ dental caries Adhere to fibrin-platelet of damaged heart valves ▶️ endocarditis
What component allows to some bacteria be acid-fast? Examples
Mycolic acid in its cell wall
Mycobacterium, Nocardia (weak)
Most common organism in a cat or dog bite. Why do the wound have a characteristic odor?. Antibiotic treatment.
- Pasteurella multocida
- Mouse-like odor→indole positive (Trp ▶️ (Tryptophanase) ▶️ indole)
- Amoxicilin-clavulanate
Sequence of replication of Hepatitis B virus. What polymerase does it use?
- DNA double stranded→+RNA template→DNA double stranded progeny
- Polymerase reverse transcriptase
Transmission pathway of Neisseria meningitidis. Once stablished a contact how can you prevent secondary cases? Which drugs do you use?
- Direct contact with contaminated respiratory secretions or aerosolized droplets.
- Antibiotic Chemoprophylaxis for close or intimate contacts preferably within 24 hours ▶️ Rifampin, Ciprofloxacin, intramuscular Ceftriaxone.
Gram-negative encapsulated bacteria, lactose fermenting positive, causing pneumonia in elderly patient. Hallmark of presentation and organism.
- Klebsiella pneumoniae
- Currant-jelly sputum, upper lobe pneumonia, lung tissue necrosis, early abscess formation
- Immunocompromised ▶️ infants, elderley and specially alcoholics
Which is the protein that is part of peptidoglycan cell wall of a clusters of gram (+) cocci? Function.
Staphylococcus aureus ▶️ Protein A (virulence factor) ▶️ bind Fc portion of IgG ▶️ ❌ Complement activation ▶️ ⬇️ C3b ▶️ ❌ opsonization and phagocytosis.
What is the mechanism of resistance to vancomycin?, example of microorganism.
- Substitution of D-lactate in place of D-alanine in the synthesis of peptidoglycan cell wall [D-ala-D-lac] (Normally binds to D-alanyl-D-alanine terminal of the cell wall peptide precursors ▶️ ❌ formation of peptidoglycan)
- Vancomycin Resistant Enterococcus (VRE), VRSA (Staph)
How can occur Penicilin resistance?
- Beta-lactamase (penicilinase)
- Modify penicilin binding protein in cell wall ▶️ mechanism of MRSA ▶️ resistant to even penicilinase resistance antibiotics
Penicilinase resistant beta-lactam antibiotics
Cephalosporins, carbapenems, nafcilin, methicillin.
Mechanism of resistance to Tetracyclines
- Efflux of drug from bacteria via active-efflux pump
- ⬆️ Protein that allow translation
Mechanism of resistance of aminoglycosides
- Inactivation by aminoglycosides-modifying enzymes ▶️ acetylation, phosphorylation, etc.
- Pseudomonas ▶️ ⬇️ antibiotic entry
In which disease or presentation you should differentiate aspergillus fumigatus vs rhizopus species? How do you differentiate them?
- Fungal rhinosinusitis
- Light Microscopy (LM):
🔵Aspergillus ▶️ narrow hyphae branching in acute angles (V-shaped) with septations
🔴Rhizopus ▶️ broad, ribbon-shaped, non-septate hyphae with branch at wide angles
Why Haemophilus influenzae cannot grow in a 5% sheep blood agar? Why does it need staphylococcus aureus to grow? How is called that phenomenom?
Haemophilus (“blood lover”) requires X factor (hematin), V factor (NAD+)
- Sheep blood agar not has enough nutrients and factors
- S. aureus cross-streaks in blood agar ▶️ secrete V factor; facilitates release release X factor from B-hemolysis ⏩ “Satellite phenomenon”
What confers to Hepatitis B virus the oncogenic feature? Which neoplasia associated?
- Viral DNA integration into the host genome
- Hepatocellular carcinoma
Which are the components or regions of endotoxin? What is the toxic compound? How is it secreted?
- Endotoxin=Lipopolysaccharide (LPS) ▶️ O antigen, core polysaccharide, Lipid A (toxic properties) ▶️ Sepsis
- LPS released during division or bacteriolysis (NOT actively secreted)
Gram (+) cocci catalase negative, able to grow in hypertonic saline (6.5%) and bile. What is the organism, diseases and risk factors associated to the transmission? What is the other laboratory identification useful for it organism?
- Enterococci (Enterococcus faecalis - 80-90%, Enterococcus faecium - 10-15%)
- Enterococcal Endocarditis (30% of nosocomial endocarditis), UTI, wound infection
- Genitourinary tract manipulation (cystoscopy, catheterization, instrumentation); GI tract manipulation (colonoscopy); obstetric procedures; Elderly.
- PYR (+)
What is the microorganism that can cause subacute endocarditis following a dental work and its laboratory features?
- Streptococcus viridans
- Gram (+), catalase (-), optochin resistant, bile insoluble
Function of virulence factor at the capsule of Haemophilus influenzae type b and its importance.
- Polyribosil ribitol phosphate (PRP) ▶️ evasion of mucosal immunity and inhibit complement mediated killing and phagocytosis
- Vaccine against type b PRP capsule
How can you identify and differentially diagnose botulism? Mechanism of action of neurotoxin.
- History of eat canned food
- 3 D´s→diplopia, dysphagia (nicotinic block), dysphonia. Also dry mouth (muscarinic block)
- Electrodiagnostic→↓compound of muscle action potential (CMAP), continous stimulus→↑CMAP►Facilitation
- (-) Ach release from presynaptic
Which gram negative rod is the most common cause malignant Otitis externa (swimmer’s ear)? Association with which patients. Other features of the organism
- Pseudomonas aeruginosa
- Elderly patients
- Motile, aerobic Non-lactose fermenting, oxidase positive, grape-like fruity odor, exotoxin A (inactivates EF-2), phospholipase C (degrades cell membranes), pyocyanin (blue-green pigment, reactive O2 species), endotoxin
What mutation render to HIV resistance to HAART (both either PI’s and NTRI, NNTRI)?
Pol gene mutations ▶️ protease variants and structural changes in reverse transcriptase
Which mutation allows to the HIV evades the humoral response?
Env gene ▶️ structural glycoproteins (neutralizing Ab’s are directed against the epitopes of folded viral envelope glycoproteins)
Empiric treatment for a prosthetic valve endocarditis due to coccus gram positive catalase (+), coagulase (-). Why?
- CoN Staphylococcus ▶️ slime producer ▶️ nosocomial infection and in indwelling catheter (peritoneal catheter), implantated foreign body (vascular graft), posthetic valve endocarditis
- Vancomycin ▶️ >80% of CoN Staph are methicillin-resistant
Atypical pneumonia in homeless patient with CD4=188, IV drug abuse, what type of fungus do you suspect and which stain do you use to Dx?
- Pneumocystis jirovecii
- Extracellular atypical fungus
- Methamine silver staining ▶️ cysts in frothy alveolar exudates
How do you identify disseminated MAC infection in a HIV+ patient? keys to differentiare from extrapulmonary tuberculosis infection. What is the prophylaxis?
- MAC infection (in common - fever, weakness, weight loss, diarrhea)→anemia, hepatosplenomegaly, ↑phosphatase alkaline, ↑LDH (widespread involvement of reticuloendothelial system), MAC growth at 41°C.
- Prophylaxis at CD4+<50 cells/uL - Azithromycin
*Tx: Clarithromycin or Azithromycin + Rifabutin or Ethambutol
Microorganisms associated with facial nerve palsy
- Borrelia burgdorferi (Lyme disease)
- HSV-1
Which organism that is one of the most common causes of gastroenteritis in adults and children can be transmitted by domestic animals? What others sources of transmission?
- Campylobacter jejuni (most common cause of acute gastroenteritis in children and adults in industrialized countries) ▶️ fecal-oral transmission
- Domestic animals ▶️ cattle, dogs, chicken, sheep (common in farm and laboratory workers); Contaminated food ▶️ undercooked poultry, unpasteurized milk
What is a gumma and in which stage of syphilis of you expect to find it? What others features do you find in this stage?
- Chronic necrotizing granuloma ▶️ painless, may ulcerate ▶️ skin, mucosas, subcutaneous tissue, bones and within organs
- Tertiary syphilis
- Cardiovascular syphilis ▶️ ascendent aortic aneurysms (with calcifications), aortic insufficiency (diastolic murmur, high-pitched tambour S2)
*Neurosiphylis (meningoencephalitis, tabes dorsalis, etc) classically occur in tertiary but can be present in any stage.
How do you differentiate with laboratory tests the both B-hemolytic streptococci?
- S. Pyogenes (group A) ▶️ Bacitracin sensitive, pyrrolidonyl arylamidase (PYR) (+)
- S. Agalactiae (group B) ▶️ Bacitracin resistant, CAMP (+), PYR (-), Hippurate test (+)
Which streptococcus is PYR(+) and also can grow in hypertonic salt (NaCl 6,5%) and bile? What culture medium use the former properties to isolate the organism?
- Enterococcus faecalis and faecium→gamma-hemolytic (variable)
- Bile esculin agar
Unique characteristic of coccidoides immitis. Where is the endemic area?
- Mold (hyphae) at 25-30 grades C (environment), thick-walled spherules containing endospores at body temperature.
- Southwestern US ▶️ California, Arizona, New Mexico, some regions of central ans south america.
*Also Dx→Sabouraud agar, serology
To what antibiotic is resistant Listeria monocytogenes, and then which antibiotic you should use as empiric therapy when suspect meningitis?
- 3rd generation cephalosporins resistant (altered penicillin-binding proteins)
- Ampicilin sensible
What type of immunity is required to clear Listeria monocytogenes and why?
- Cell-mediated immunity→facultative intracellular gram (+) rod with “rocket-tails”→pass cell to cell, move intracellularly→avoid antibodies and phagocytosis
- Susceptible group→deficient CMI►infants, chemotherapy patients, HIV(+)
Antimalarial drug for plasmodium falciparum erythrocytic forms contracted from africa, why?
Cloroquine resistant, give mefloquine
Treatment for chagas disease
Nifurtimox
Diagnose of Legionella penumophila. Distinctive laboratory abnormality. Diseases.
- Legionella Urine antigen test
- Culture of organism in BCYE (Buffered charcoal yeast extract)
- Hyponatremia
- Pontiac fever (flu-like, self-limited) or Legionaries disease (exposed contaminated water, pneumonia)
*Gram stain→many neutrophils but few or no organism
Gram negative rod, oxidase positive, green pigment producer (pyocyanin), that growth in moist environment. What is the microorganism and what diseases cause in that enviroment? Others features of the organism.
- Pseudomonas aeruginosa
- Swuimmer’s ear, hot tub folliculitis, burn wound
- non-lactose fermenting, motile
*Hot tub folliculitis acquired in public or hotel swimming pool or hot tubs.