Micro class exam 1 Flashcards
It’s the microbes who will have the last word
Louis Pasteur
She was puzzled as to why learned people didn’t adopt chemistry as a religion
Betty Smith
Inhalation anthrax
Bacillus anthracis
immunocompromised
a condition in which a persons immune system is not properly functioning, causes difficulty dealing with illness
Echerichia coli
bacterial hemorrhagic disease, enterohemorrhagic bacteria
gram negative
nosocomial
hospital acquired infections
virulence
the potential to cause disease
epidemiology
the study of the factors determining the frequency and distribution of disease
pathogenesis
the study of how disease develops
innate immune response
nonspecific defense
first line of defense by the host
lethal for most diseases
adaptive immune response
lethal and specific
has the benefit of memory
Peptidoglycan
main component of cell wall, not found in human cells
Which of the following is true about the relationship between humans and pathogens
a) the human body has its own population of microbes
b)most microbes are pathogenic and cause disease
c) humans do not come into contact with many microbes
d) non-pathogenic organisms can never be pathogenic
A
In the past 10 years the earth has become warmer. this has probably caused which of the following
a) more respiratory disease (transmitted by droplets)
b) spread of insect-transmitted disease
c) less respiratory disease
d) less digestive disease
B
If the availability of clean drinking water decreases, then we can expect
a) more respiratory disease
b) more digestive disease
c) more insect-borne disease
d) less respiratory disease
B
A term reserved for diseases acquired in a clinical setting is a(n) _____ infection
a) enterohemorrhagic
b) contagious factors
c) nosocomial
d) multi-drug resistant
e) acute
C
Which type of microorganism causes the majority of infectious disease
A) bacteria
b) fungi
c)parasites
d) viruses
D-viruses
Which of the following are important in guarding against the spread of infectious disease?
A) handwashing between working with different patients in healthcare situations
b) handwashing after using restrooms
c) handwashing before and after food preparation
d) none of the choices
e) all of the choices
E
The general term for features of microorganisms that enhance pathogenesis
a) virulence factors
b) toxins
c) inflammatory agents
d) antibiotics
a) virulence factors
Redness swelling and pain indicate which of the following
a) inflammation
b) blush reflex
c) presence of non-pathogenic organisms
d) adaptive immune response
A
Why are infectious diseases a serious healthcare problem in the developed world again?
a) the human immune system is becoming less effective
b) there is increasing resistance to treatments that were once completely effective
c) there are more pathogenic organisms than there used to be
d) pathogens have a wider variety of mechanisms to damage host cells
B
Protons
located in the nucleus of the atom, have a positive charge
atomic number
equal to the number of protons in the core of that atom
Neutrons
located in the core of the atom but have no charge. the atomic weight of an element equals the number of protons plus neutrons
electrons
these atomic particles have a negative charge and are located in shells (or clouds) that surround the core of the atom. In neutral molecules the number of uncharged electrons equals the number of protons
cation
lost an electron, positive
ion
gains an electron, negative
nonpolar covalent bond
sharing of the electrons between two atoms is equal
polar covalent bond
the sharing of electrons between two atoms is unequal (one side pulling more than the other) results in a weak electric charge
Why is water the most important component of life
1) solubility (spheres of hydration saturate)
2) reactivity (dehydration synthesis and hydrolysis)
3) heat capacity
dehydration synthesis
removal of a water molecule to build molecules
hydrolysis
addition of a water molecule to break down molecules
Carbohydrates
cellulose and starch, broken down and stored as glycogen
Lipids
chemically diverse group of substances that includes fats, phospholipids, and steroids. Lipids are used as energy sources
Fatty acids
long chains of C with bound hydrogens, a fat is made of 3C molecule glycerol
Other forms of lipids
phospolipids (lipid + phosphate)
Glycolipid (lipid + carbohydrate)
Steroids
formation of proteins
made of amino acids, form a peptide bond between amino and carboxyl group, amino acids link into peptides and peptides link into proteins, if amino acids contain sulfur atoms they form disulfide bridges used in protein folding
primary protein structure
sequence of amino acids in polypeptide chain
secondary protein structure
a folding or coiling of the polypeptide
that is brought about by the sequence of the amino acids and hydrogen
bonds that form between amino acids. This secondary folding is usually
seen as either a helix or a pleated sheet form.
Tertiary protein structure
folding of the chain upon itself. This
folding confers the major three-dimensional structure of the polypeptide
and is held in place in part by hydrogen bonding and the formation
of disulfide bridges. This folding can result in several shapes, including
globular and fibrous (threadlike) structures.
Quaternary protein structure
occurs in very large proteins for which more
than one polypeptide is joined together. This joining together of individual
polypeptide chains also occurs through the formation of bonds
and between amino acids in the individual polypeptide chains.
Nucleic acids
cellular info and energy
deoxyribonucleic acid (DNA) had adenine, thymine, guanine, or cytosine
ribonucleic acid (RNA) has that but with uracil instead of thymine
Purines
two aromatic rings, adenine and guanine
Pyrimidines
one aromatic ring, cytosine, thymine, and uracil
ATP
adenosine triphosphate
major energy molecule in biological systems
remove phosphate to get energy (create ADP), then recycle ADP into more ATP
An atom has 17 electrons it is most likely to
a) be inert
b) form an anion
c) form a cation
d) react with a Cl- ion
B) form an anion
Electron sharing leads to covalent bonds which compound contains covalent bonds
a) H2O
b) Glucose
c) fatty acids
d) amino acids
e) all of the choices
E- all of the choices
Order the substances based on the most acidic first. which is the most acidic?
a) gastric fluids
b) pure water
c) baking soda
d) soap solutions
e) tomatoes
A, e, b, c,d
which of the following has just two reactive groups
a) amino acids
b) fatty acids
c) glucose
d) proteins
e) nucleic acids
a) amino acids
Which of these is not a component of the plasma membrane
a) triglyceride
b) phospholipid
c) glucose
d) cholesterol
e) glycolipid
c
Which is not a component of DNA
a) cytosine
b) deoxyribose
c) phosphate
d) ribose
e) thymine
d) ribose
Metabolism
the chemical process that goes on inside any living organism
Autotrophy
“self feeding” obtain carbon atoms from inorganic sources (such as CO2)
photoautotrophs use sunlight ex) plants
chemoautotrophs use chemical reactions with nitrates and sulfates
Heterotrophy
get carbon atoms from organic molecules present in other organisms
photoheterotrophs obtain energy from sunlight and convert it to chemical energy
chemoheterotrophs obtain energy by breaking down organic compounds
Catabolism
all metabolic processes in which molecules are broken down to release the energy stored in their chemical bonds
involves electron transfer
Anabolism
metabolic processes in which energy is derived from catabolism is used to build large organic molecules from smaller ones
involve electron transfer
redox reaction
oxidation reaction and reduction partner
reduction (gains electron)
oxidation (loses electron)
aerobic respiration
metabolism that uses oxygen
38 ATP for every molecule of glucose
anaerobic respiration
metabolism that occurs without the use of oxygen
2 ATP for every molecule of glucose
facultative anaerobes
organisms that can carry out metabolic processes either way, aerobically or anaerobically
enzymes
protein molecules with distinct 3D shape
act as a catalyst by lowering the energy of activation
Enzyme substrate complex
when the substrate is bonded to the enzyme at the active site
causes chemical bonds in the substrate molecule to change and leads to formation of a product
cofactor enzyme
enzyme requires the help of a cofactor ( a separate inorganic nonprotein substance) to be able to react with the substrate. Works allosterically (does not bind to active site)
coenzyme
nonprotein organic molecule that must bind to the active site of the enzyme to allow the enzyme to react with the substrate
carrier molecules
present in metabolic reactions and can carry H atoms or electrons in redox reactions. Ex) cofactors and coenzymes
Common carrier molecules in biological reactions
FAD (flavin adenine dinucleotide) (can carry 2 H and 2e-, called FADH2)
NAD+ (nicotinamide adenine dinucleotide)
competitive inhibition
inhibitor molecule similar in structure to the substrate for a given enzyme competes with the substrate to bind to the enzyme’s active site
Allosteric inhibition
molecules bind to the allosteric site (a separate part of the enzyme, not the active site) this causes the active site to change shape and prevents substrate from binding
Feedback inhibition
final product in a pathway accumulates and begins to bind to and inactivate the enzyme that catalyzes the first reaction of the pathway
factors that affect enzyme reactions
temperature, pH, concentration of substrate/product/enzyme
Glycolysis
carbohydrate such as glucose is broken down through a series of steps that ultimately result in the production of 2 molecules of ATP for each glucose, process occurs at cytoplasm and does not require oxygen, forms NADH, pyruvate, and ATP
Kreps cycle
aerobic cellular respiration using the pyruvate from glycolysis
to enter the Krebs cycle the 3C pyruvate from glycolysis must be modified to a 2C acetyl group by losing a carbon as CO2
1) carbon is oxidized to CO2
2) electrons are transferred to coenzyme carrier molecules that take the electrons to the electron transport chain
3) energy is captured and stored when ADP is converted to ATP
Electron Transport Chain
cellular process in which electrons are transferred to final electron acceptor (for aerobic this is oxygen)
series of redox reactions
NADH enters ETC and passes on it’s electrons who’s energy is released through chemiomosis
Krebs + ETC yields 36 ATP
location of ETC
Eukaryotes: protons pumped between mitochondria and intermembrane space
Prokaryotes: ETC pumps protons across plasma membrane
Proton motive force
ETC create a high proton concentration inside the cell which forms a concentration gradient to pump against, gradient is known as proton motive force
Fermentation
enzymatic breakdown of carbohydrates in which the final electron acceptor is an organic molecule, only has 2ATP yielded during glycolysis, different organisms use different fermentation pathways
Homolactic fermentation
pyruvate molecule is converted directly to lactate with reactions driven by the energy of the electrons from NADH, does not have gas byproduct, aka lactic fermentation
Alcoholic fermentation
CO2 released by pyruvate to for acetaldehyde, reduced to ethanol using NADH
Choose best description for enzyme from the following
a) precursor of protein
b) catalyst
c) inorganic compound
d) precursor of ethanol
e) ethanol
B) catalyst
Choose the best match for alcohol from the following
a) catalyst
b) precursor of ethanol
c) ethanol
d) inorganic compound
e)Precursor of protein
C)ethanol
choose the best match for acetaldehyde from the following
a) precursor of protein
b) inorganic compound
c) catalyst
d) ethanol
e)precursor of ethanol
e) precursor of ethanol
Choose the best match for CO2 from the following
a) precursor of protein
b) inorganic compound
c) catalyst
d) ethanol
e)precursor of ethanol
b) inorganic compound
Choose the best match for amino acid from the following
a) precursor of protein
b) inorganic compound
c) catalyst
d) ethanol
e)precursor of ethanol
a) precursor of protein
Choose the best match for energy of activation from the following
a) energy required to start a reaction
b) stabilize water and protein structure
c) where enzyme catalyzed reactions occur
d) uneven distribution of a chemical in solution or across a membrane
e) released by catabolic reactions
a) energy required to start a reaction
Choose the best match for energy (fuel) from the following
a) energy required to start a reaction
b) stabilize water and protein structure
c) where enzyme catalyzed reactions occur
d) uneven distribution of a chemical in solution or across a membrane
e) released by catabolic reactions
e) released by catabolic reactions
Choose the best match for gradient from the following
a) energy required to start a reaction
b) stabilize water and protein structure
c) where enzyme catalyzed reactions occur
d) uneven distribution of a chemical in solution or across a membrane
e) released by catabolic reactions
c)where enzyme catalysed reactions occur
Choose the best match for hydrogen bonding from the following
a) energy required to start a reaction
b) stabilize water and protein structure
c) where enzyme catalyzed reactions occur
d) uneven distribution of a chemical in solution or across a membrane
e) released by catabolic reactions
b) stabilize water and protein structure
Choose the best match for active site from the following
a) energy required to start a reaction
b) stabilize water and protein structure
c) where enzyme catalyzed reactions occur
d) uneven distribution of a chemical in solution or across a membrane
e) released by catabolic reactions
a) energy required to start a reaction
Which of the following is a product of catabolism
a) DNA
b) RNA
c) pyruvic acid
d) protein
e) phospholipid
c) pyruvic acid
Which of the following is a product of anabolism?
a) CO2 generated during oxidative phosphorylation
b) H+ generated during oxidative phosphorylation
c) lactic acid generated during fermentation
d) acetic acid generated during fermentation
e) lipoproteins generated in membranes
b) H+ generated during oxidative phosphorylation
Autotrophic organisms obtain carbon from
a) organic molecules
b) photosynthesis
c) CO2
d) the soil
e) water
c) CO2
Heterotrophic organisms obtain carbon from
a) organic molecules
b) photosynthesis
c) CO2
d) the soil
e) water
a)organic molecules
Anabolism is the process in which
a) molecules are broken down
b) molecules are transported out of the cell
c) energy in the form of ATP is used up
d) energy in the form of ATP is released
c) energy in the for of ATP is used up
Catabolism is the process in which
a) energy is used up
b) molecules are transferred out of the cell
c) molecules are built up
d) molecules are broken down
d) molecules are broken down
Oxidation is defined as
a) gaining an electron
b) losing an electron
c) utilizing CO2 for metabolism
d) destroying CO2 during metabolism
e) none of the above
B
during a redox reaction
a) protons are lost
b) electrons are gained and lost
c) electrons are generated
d) protons are gained
e) electrons are not used at all
B
During a reduction reaction a substance
a) gains an electron and becomes more positively charged
b) loses an electron and becomes positively charged
c) gains an electron and becomes more negatively or less positively charged
d) loses an electron and becomes more negatively charged
e) neither gains or loses an electron
C
In prokaryotes, the greatest amount of ATP per glucose molecule is produced through
a) aerobic cellular respiration
b) fermentation
c) anaerobic respiration
d) both 1&2
e) none of the choices
A
Organisms that can metabolize either in the presence or absence of oxygen are called
a) obligate anaerobes
b) micro-aerobes
c) obligate aerobes
d) facultative anaerobes
D
Complete oxidation of glucose yields
a) only CO2 and water
b) Only CO2 and energy
c) only CO2
d) none of these choices
C, makes CO2 water and 38 ATP
enzymes
a) cause a reaction to happen
b) cause a reaction to happen more slowly
c) increase the activation energy
d) decrease the energy of activation
D
Which of the following can be required for an enzyme to function
a)cofactors
b)coenzymes
c) prosthetic groups
d) metal ions
e) all of the choices
E
Allosteric inhibition occurs
a) because of conformational changes in the enzyme
b) at the active site
c) because a compound binds at a site which reduces the maximum rate at which the enzyme works
d) when inhibitors bind close to the active site
e) because of a molecule identical to the substrate
a
Which of the following affect enzyme activity
a) concentration of product
b) temperature
c) pH
d) concentration of substrate
e) all of the above
E
The net gain of molecules of ATP solely from glycolysis is
a) 4
b)2
c) 0
d) 19
e) 36
B
Fermentation can produce which of the following
a) ethanol
b) proponic acid
c) butyric acid
d) CO2
e) all of the choices
E
Homolactic fermentation
a) results in a loss of ATP
b) is not involved in anaerobic respiration
c) is a form of aerobic respiration
d) produces CO2
e) produces lactic acid
E
The Krebs cycle only accepts
a) pyruvate from the glycolytic pathway
b) single C products derived from fermentation
c) 3C molecules
d) 2 C molecules
A
The final electron acceptor in aerobic respiration is
a) hydrogen
b) both oxygen and water
c) water
d) oxygen
d) oxygen
The majority of electrons are carried to the ETC by
a) FAD
b) NAD+
C) glycolysis
D) the Krebs cycle
e) none of the choices
b) NAD+
in anaerobic metabolism, the final electron acceptor can be any of the following except
a) nitrite
b) sulfate
c) oxygen
d) nitrate
C (no oxygen in anaerobic)
The total number of ATP molecules that result from the breakdown of one molecule of glucose via glycolysis and oxidative phosphorylation by a prokaryote is
a) 4
b)16
c)34
d)38
e)32
d) 38
Answer true or false to the following statement: Pathogens with good metabolic function are more successful at causing disease
TRUE
T/F: A gastric biopsy is required to determine whether a patient with an ulcer is infected with helicobacteria
FALSE
T/F: Iron is critical for the growth of some pathogenic microbes
True
Prokaryotes
extremely simple cells that lack a nucleus and other structures enclosed by a membrane
Eukaryotes
organisms made up of cells that do contain a membrane enclosed nucleus as well as other membrane-enclosed structures outside the nucleus
organelles
membrane enclosed cells
cocci
spherical and ovoid bacteria
bacilli
rod shaped bacteria
spirilla
spiral shaped bacteria
spirochetes
flexible and undulating bacteria shape
diplococci
two cell arrangements, such as gonorrhea
simple stains
only one dye and are used to ID the shape and multicell arrangement of bacteria
Differential stains
use 2+ dyes to distinguish either between two or more organisms or between different parts of the same organism
primary dye + decolorizing agent + counterstain
gram stain steps
1) apply crystal violet
2) add grams iodine
3) decolorize with alcohol
4) apply safranin
gram positive: purple (contain peptidoglycan wall)
gram negative: pink
Negative (capsule) stain
ID bacterial shapes, particularly spirochetes, identifies presence of capsules (limits access of antiseptics , disinfectants, and even antibiotics)
the stain colors only the background and not the cell
Flagella Stain
bacteria have flagella (allow for moving), allows organisms to move from the initial site of the infection, flagella stain coats flagella with metals or layers of dye to see them using a microscope
Ziehl Neelsen Acid fast Stain
used to detect Mycobacterium tuberculosis and Mycobacterium leprae (which causes leprosy), have cell wall that contains mycolic acid (waxy) and lipids which make it difficult to penetrate. Only cells with mycolic acid can be stained for being acid fast
Endospore stain
differential stain in which sample is colored with malachite green and the endospore walls are thick and need heating to make them permeable to stain
nonspore-red
endospore- green
Endospore
small tough dormant structure that forms in bacterial cells and several types of bacteria can undergo sporulation (the process in which endospores are formed)
Pathogens
organisms that can infect humans and cause illness in them
mutualistic
depend on humans for survival and we live more comfortably with them
most micro organisms are harmless
help protect us from pathogens, produce vitamins, and digest food
opportunistic pathogens
organisms that cause disease by taking advantage of a host’s increased susceptibility to infection
Pathogens must be able to…
a potential pathogen must be able to adhere to, penetrate, and persist in the host cell (get in and stay in)
it must be able avoid, evade, or compromise the host defense mechanisms
it must damage the host and permit the spread of infection
it must be able to exit from one host and infect another host